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基于组合minimizer种子的泛基因组图序列比对算法
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作者 高佳 徐云 《计算机工程》 北大核心 2025年第8期53-61,共9页
随着测序技术的发展和应用,人类基因组序列的研究已从个体分析逐步扩展到群体分析。为更好地展示种群不同样本之间的遗传变异信息,泛基因组图模型开始取代传统的线性多序列参考基因组模型,序列到图的比对成为生物序列分析的关键问题之... 随着测序技术的发展和应用,人类基因组序列的研究已从个体分析逐步扩展到群体分析。为更好地展示种群不同样本之间的遗传变异信息,泛基因组图模型开始取代传统的线性多序列参考基因组模型,序列到图的比对成为生物序列分析的关键问题之一。现有比对算法通常采用种子与扩展策略,但由于图中组合的路径较多,定位和验证阶段的时间成本高,需要进一步优化单种子选取方法,减少候选位置的数量。为此,提出一种基于组合minimizer种子的序列比对算法,在定位阶段通过对minimizer种子的组合hash,扩展单个种子的覆盖范围。同时,通过序列和相对位置两方面信息查找种子,减少假阳性匹配位置的数量,从而降低后续筛选和验证的工作量。实验结果表明,与主流算法相比,该算法能够减少约80%的候选位置,时间性能提升1~3倍,同时保持相当的索引内存占用和精确比对能力。 展开更多
关键词 泛基因组图 序列比对 种子与扩展策略 minimizer种子
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MINIMIZERS OF L^(2)-SUBCRITICAL VARIATIONAL PROBLEMS WITH SPATIALLY DECAYING NONLINEARITIES IN BOUNDED DOMAINS
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作者 陈彬 高永帅 +1 位作者 郭玉劲 吴越 《Acta Mathematica Scientia》 SCIE CSCD 2024年第3期984-996,共13页
This paper is concerned with the minimizers of L^(2)-subcritical constraint variar tional problems with spatially decaying nonlinearities in a bounded domain Ω of R~N(N≥1).We prove that the problem admits minimizers... This paper is concerned with the minimizers of L^(2)-subcritical constraint variar tional problems with spatially decaying nonlinearities in a bounded domain Ω of R~N(N≥1).We prove that the problem admits minimizers for any M> 0.Moreover,the limiting behavior of minimizers as M→∞ is also analyzed rigorously. 展开更多
关键词 decaying nonlinearity L~2-subcritical minimizeRS bounded domains mass concentration
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Algorithms for Multicriteria Scheduling Problems to Minimize Maximum Late Work, Tardy, and Early
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作者 Karrar Alshaikhli Aws Alshaikhli 《Journal of Applied Mathematics and Physics》 2024年第2期661-682,共22页
This study examines the multicriteria scheduling problem on a single machine to minimize three criteria: the maximum cost function, denoted by maximum late work (V<sub>max</sub>), maximum tardy job, denote... This study examines the multicriteria scheduling problem on a single machine to minimize three criteria: the maximum cost function, denoted by maximum late work (V<sub>max</sub>), maximum tardy job, denoted by (T<sub>max</sub>), and maximum earliness (E<sub>max</sub>). We propose several algorithms based on types of objectives function to be optimized when dealing with simultaneous minimization problems with and without weight and hierarchical minimization problems. The proposed Algorithm (3) is to find the set of efficient solutions for 1//F (V<sub>max</sub>, T<sub>max</sub>, E<sub>max</sub>) and 1//(V<sub>max</sub> + T<sub>max</sub> + E<sub>max</sub>). The Local Search Heuristic Methods (Descent Method (DM), Simulated Annealing (SA), Genetic Algorithm (GA), and the Tree Type Heuristics Method (TTHM) are applied to solve all suggested problems. Finally, the experimental results of Algorithm (3) are compared with the results of the Branch and Bound (BAB) method for optimal and Pareto optimal solutions for smaller instance sizes and compared to the Local Search Heuristic Methods for large instance sizes. These results ensure the efficiency of Algorithm (3) in a reasonable time. 展开更多
关键词 Scheduling Single Machine Hierarchical Simultaneous Minimization ALGORITHMS Branch and Bound Local Search Heuristic Methods
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Optimized model-based control of main mine ventilation air flows with minimized energy consumption 被引量:7
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作者 S.Sjostrom E.Klintenas +1 位作者 P.Johansson J.Nyqvist 《International Journal of Mining Science and Technology》 SCIE EI CSCD 2020年第4期533-539,共7页
In early 2018,the Boliden Garpenberg operation implemented an optimized control strategy as an addition to the existing ventilation on demand system.The purpose of the strategy is to further minimize energy use for ma... In early 2018,the Boliden Garpenberg operation implemented an optimized control strategy as an addition to the existing ventilation on demand system.The purpose of the strategy is to further minimize energy use for main and booster fans,whilst also fulfilling airflow setpoints without violating constraints such as min/max differential pressure over fans and interaction of air between areas in mines.Using air flow measurements and a dynamical model of the ventilation system,a mine-wide coordination control of fans can be carried out.The numerical model is data driven and derived from historical operational data or step changes experiments.This makes both initial deployment and lifetime model maintenance,as the mine evolves,a comparably easy operation.The control has been proven to operate in a stable manner over long periods without having to re-calibrate the model.Results prove a 40%decrease in energy use for the fans involved and a greater controllability of air flow.Moreover,a 15%decrease of the total air flow into the mine will give additional proportional heating savings during winter periods.All in all,the multivariable controller shows a correlation between production in the mine and the ventilation system performance superior to all of its predecessors. 展开更多
关键词 Mine ventilation Ventilation on demand Optimized model-based control minimized energy consumption Advanced process control
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Multiple bifurcations and local energy minimizers in thermoelastic martensitic transformations 被引量:1
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作者 Chen Xuan Shurong Ding Yongzhong Huo 《Acta Mechanica Sinica》 SCIE EI CAS CSCD 2015年第5期660-671,共12页
Thermoelastic martensitic transformations in shape memory alloys can be modeled on the basis of nonlinear elastic theory.Microstructures of fine phase mixtures are local energy minimizers of the total energy.Using a o... Thermoelastic martensitic transformations in shape memory alloys can be modeled on the basis of nonlinear elastic theory.Microstructures of fine phase mixtures are local energy minimizers of the total energy.Using a one-dimensional effective model,we have shown that such microstructures are inhomogeneous solutions of the nonlinear Euler-Lagrange equation and can appear upon loading or unloading to certain critical conditions,the bifurcation conditions.A hybrid numerical method is utilized to calculate the inhomogeneous solutions with a large number of interfaces.The characteristics of the solutions are clarified by three parameters:the number of interfaces,the interface thickness,and the oscillating amplitude.Approximated analytical expressions are obtained for the interface and inhomogeneity energies through the numerical solutions. 展开更多
关键词 Thermoelastic martensitic transformation MICROSTRUCTURES Nonlinear elasticity BIFURCATION Energy minimizer
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REGULARITIES AND SINGULARITIES OF THE ENERGY MINIMIZERS OF THE HEISENBERG GROUP TARGETS 被引量:1
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作者 贾高 《Acta Mathematica Scientia》 SCIE CSCD 2003年第4期447-452,共6页
In this paper, the properties of the maps for the Heisenberg group targets are studied. For u e∈W1,α(Ω, Hm), some Poincare type inequalities are proved. For the energy minimizers, the ∈-regularity theorems and the... In this paper, the properties of the maps for the Heisenberg group targets are studied. For u e∈W1,α(Ω, Hm), some Poincare type inequalities are proved. For the energy minimizers, the ∈-regularity theorems and the singularity theorems are obtained. 展开更多
关键词 Heisenberg group energy minimizer Legendrian map regularity singularity
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EXISTENCE AND BLOW-UP BEHAVIOR OF CONSTRAINED MINIMIZERS FOR SCHRDINGER-POISSON-SLATER SYSTEM 被引量:1
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作者 朱新才 《Acta Mathematica Scientia》 SCIE CSCD 2018年第2期733-744,共12页
In this article, we study constrained minimizers of the following variational problem ε(p):={u∈H1 inf(R3),||u||22=p} E(u),ρ〉0,where E(u) is the SchrSdinger-Poisson-Slater (SPS) energy functional E(... In this article, we study constrained minimizers of the following variational problem ε(p):={u∈H1 inf(R3),||u||22=p} E(u),ρ〉0,where E(u) is the SchrSdinger-Poisson-Slater (SPS) energy functional E(u):1/2∫R3|△u(x)|2dx-1/4∫R3∫R3u2(y)u2(x)/|x-y|dydx-1/p∫R3|u(x)∫pdx in R3,and p ∈ (2,6). We prove the existence of minimizers for the cases 2 〈 p 〈10/3, p 〉 0, and P =10/3, 0 〈 p 〈 p*, and show that e(ρ) = -∞ for the other cases, where p* = ||φ||22 and φ(x) is the unique (up to translations) positive radially symmetric solution of -△u + u = u7/3 in R3. Moreover, when e(ρ*) = -∞, the blow-up behavior of minimizers as p/p* is also analyzed rigorously. 展开更多
关键词 SchrSdinger-Poisson-Slater system constrained minimizer blow-up behavior
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A REMARK ON THE REGULARITY OF VECTOR-VALUED MAPPINGS DEPENDING ON TWO VARIABLES WHICH MINIMIZE SPLITTING-TYPE VARIATIONAL INTEGRALS
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作者 M. Bildhauer M. Fuchs 《Acta Mathematica Scientia》 SCIE CSCD 2010年第3期963-967,共5页
We combine the maximum principle for vector-valued mappings established by D'Ottavio, Leonetti and Musciano [7] with regularity results from [5] and prove the Holder continuity of the first derivatives for local mini... We combine the maximum principle for vector-valued mappings established by D'Ottavio, Leonetti and Musciano [7] with regularity results from [5] and prove the Holder continuity of the first derivatives for local minimizers u: Ω→^R^N of splitting-type variational integrals provided Ω is a domain in R^2. 展开更多
关键词 Local minimizers interior regularity anisotropic energies two-dimensional problems
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Higher-Order Minimizers and Generalized (F,<i>ρ</i>)-Convexity in Nonsmooth Vector Optimization over Cones
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作者 S. K. Suneja Sunila Sharma Malti Kapoor 《Applied Mathematics》 2015年第1期7-19,共13页
In this paper, we introduce the concept of a (weak) minimizer of order k for a nonsmooth vector optimization problem over cones. Generalized classes of higher-order cone-nonsmooth (F, ρ)-convex functions are introduc... In this paper, we introduce the concept of a (weak) minimizer of order k for a nonsmooth vector optimization problem over cones. Generalized classes of higher-order cone-nonsmooth (F, ρ)-convex functions are introduced and sufficient optimality results are proved involving these classes. Also, a unified dual is associated with the considered primal problem, and weak and strong duality results are established. 展开更多
关键词 NONSMOOTH Vector Optimization OVER CONES (Weak) minimizeRS of Order k NONSMOOTH (F ρ)-Convex Function of Order k
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Asymptotics for Radial Minimizers of a Ginzburg-Landau Type Functional
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作者 雷雨田 《Northeastern Mathematical Journal》 CSCD 2002年第1期49-58,共10页
The behavior of radial minimizers for a Ginzburg-Landau type functional is considered. The weak convergence of minimizers in W1,n is improved to the strong convergence in W1,n. Some estimates of the rate of the conver... The behavior of radial minimizers for a Ginzburg-Landau type functional is considered. The weak convergence of minimizers in W1,n is improved to the strong convergence in W1,n. Some estimates of the rate of the convergence for the module of minimizers are presented. 展开更多
关键词 Ginzburg-Landau-type functional radial minimizer regularizable min-imizer asymptotic behavior
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China Prevents and Minimizes Financial Risks──Memorandum
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《China's Foreign Trade》 1999年第5期20-20,共1页
关键词 In China Prevents and minimizes Financial Risks Memorandum
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从最小化到彻底隐藏——实战4t Tray Minimizer神奇功能13招
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作者 曹国丽 《电脑应用文萃》 2004年第3期40-43,共4页
关键词 最小化 隐藏 4t TRAY minimizer软件 托盘区 桌面文件 任务栏
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Torque control strategy with V2X information for HEVs to minimize fuel consumption
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作者 Yasutaka Okada Shunki Nishii +2 位作者 Akihiro Takeshita Kazuki Harada Yudai Yamasaki 《Control Theory and Technology》 EI CSCD 2022年第2期197-209,共13页
Today,much information from traffic infrastructures and sensors of ego vehicle is available.Using such information has a potential for internal combustion engine vehicle to reduce fuel consumption in real world.In thi... Today,much information from traffic infrastructures and sensors of ego vehicle is available.Using such information has a potential for internal combustion engine vehicle to reduce fuel consumption in real world.In this paper,a powertrain controller for a hybrid electric vehicle aiming to reduce fuel consumption is introduced,which uses information from traffic signals,the global positioning system and sensors,and the preceding vehicle.This study was carried out as a benchmark problem of engine and powertrain control simulation and modeling 2021(E-COSM 2021).The developed controller firstly decides reference acceleration of the ego vehicle using the traffic signal and the position information and the preceding vehicle speed.The acceleration and deceleration leading to increase in unnecessary fuel consumption is avoided.Next,the reference engine,generator,and motor torques are decided to achieve the reference acceleration and minimize fuel consumption.In addition,the reference engine,generator and motor torques were decided by the given fuel consumption map for the engine,and by the virtual fuel consumption maps for the generator and the motor.The virtual fuel consumption is derived from the efficiency maps of the generator and the motor using a given equivalent factor,which converts electricity consumption to fuel for the generator and the motor.In this study,a controller was designed through the benchmark problem of E-COSM 2021 for minimizing total fuel consumption of the engine,the generator,and the motor.The developed controller was evaluated in driving simulations.The result shows that operating the powertrain in efficient area is a key factor in reducing total fuel consumption. 展开更多
关键词 Powertrain optimization Fuel consumption minimization Hybrid electric vehicle Speed following system
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Optimal Placement of Reclosers to Minimize Power Losses during Non-Load Bearing Disturbances in a Power Distribution Using Firefly Algorithm
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作者 Wyclife Odongo Amolo Peter Musau Abraham Nyete 《Journal of Power and Energy Engineering》 2021年第5期63-75,共13页
The research reported in this paper focuses on non-technical power loss reduction for power distribution systems. Such reduction of costs of energy not served (ENS.COST), is intelligently evaluated and optimized using... The research reported in this paper focuses on non-technical power loss reduction for power distribution systems. Such reduction of costs of energy not served (ENS.COST), is intelligently evaluated and optimized using a firefly algorithm, from where savings of 43.3% on energy not served are achieved. 展开更多
关键词 Loss Minimization Non-Load Bearing Power Losses Optimum Location Reclosers Transient Power Balance
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Real-Time Optimization Strategy to Minimize Switching Losses for Three-Level NPC Inverter
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作者 Kai Li Min Wei +3 位作者 Chuan Xie Fujin Deng Josep M.Guerrero Juan C.Vasquez 《CSEE Journal of Power and Energy Systems》 2025年第4期1635-1646,共12页
This paper proposes a real-time optimization strategy,aimed at minimizing switching losses in a three-level neutral-point-clamped(3L-NPC)inverter.The proposed strategy consists of optimized clamping strategy and unifi... This paper proposes a real-time optimization strategy,aimed at minimizing switching losses in a three-level neutral-point-clamped(3L-NPC)inverter.The proposed strategy consists of optimized clamping strategy and unified triangular carrier based discontinuous pulse width modulation(DPWM)strategy.In each control period,the optimized clamping strategy determines optimal clamped phases and voltage levels to clamp the phase with absolute current as big as possible.Based on obtained optimal results,unified triangular carrier based DPWM strategy calculates the injected common mode voltage(CMV)and generates driving signals for semiconductor switching devices by comparing final modulation signals and two phase-deposited carriers.Analysis and experiment results show the proposed strategy not only can reduce switching losses up to 49.8%compared with conventional space vector PWM(SVPWM)but also has features of low computation burden and easy implementation. 展开更多
关键词 Discontinuous pulse width modulation minimize switching losses three-level neutral-point-clamped inverter voltage source inverter
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Minimally Invasive Coronary Artery Bypass Grafting Reduces Postoperative Serum Lactate Level and Minimizes Associated Complications
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作者 Zhi Xian Ong Jai Ajitchandra Sule +3 位作者 Shen Liang Guohao Chang Theo Kofidis Faizus Sazzad 《World Journal of Cardiovascular Surgery》 2025年第8期194-206,共13页
Background:Postoperative lactate levels have been considered a marker of intraoperative ischemia,which can affect patients’prognosis.This study aims to compare the immediate postoperative complications due to high se... Background:Postoperative lactate levels have been considered a marker of intraoperative ischemia,which can affect patients’prognosis.This study aims to compare the immediate postoperative complications due to high serum lactate levels of patients who had undergone coronary artery bypass graft(CABG)via minimally invasive cardiac surgery(MICS)vs.conventional me-dian sternotomy(MS).Methods:A total of 111 MICS CABG patients were retrospectively analysed and compared with 3614 MS CABG patients from a mixed Asian population between January 2009 and June 2020.A generalized structural equation model(gSEM)was constructed and applied for data anal-ysis,with the primary outcome of this study being high postoperative serum lactate levels(≥4 mmol/L)and its associated complications.The model con-sidered patients’demographics,blood tests,Charlson co-morbidity index,and the type of operation.Results:There were no significant differences in the pa-tients’preoperative profiles.The average postoperative serum lactate level in both groups was 3.2 mmol/L(range:0.5 to 15.6 mmol/L).MICS patients had significantly lower postoperative lactate levels(coefficient:−1.1;95%C.I.:−1.8 to−0.4,p-value:0.002).Moreover,a unit increase in lactate level was associ-ated with a 12%increase in the odds of developing a new arrhythmia postop-eratively(adjusted odds ratio:1.1;95%C.I.:1.0 to 1.3,p-value:0.048).Con clusion:MICS was associated with lower postoperative lactate levels and re duced metabolic stress,likely due to less trauma.Elevated lactate during CPB correlated with higher morbidity and mortality.Patients who are eligible for both approaches may benefit more from the MICS approach. 展开更多
关键词 Minimally Invasive Cardiac Surgery Coronary Artery Bypass Serum Lactate Open Heart Surgery Clinical Outcomes COMPLICATIONS
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MINIMIZERS FOR THE N-LAPLACIAN
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作者 Wenbo WANG Quanqing LI +1 位作者 Wei ZHANG Chunlei TANG 《Acta Mathematica Scientia》 2025年第5期2120-2134,共15页
In this paper,we investigate the minimization problem e_(s)(p)=_(u∈W_(V)^(1,N))(r^(N)),||u||_(N)^(N)=p>0 inf E(u),where E(u)=1/N∫_(R_(N))|▽_(u)|^(N)dx+1/N∫_(R_(N))V(x)|u|^(N)dx-1/s∫_(R_(N))|u|^(s)dx.Here s>... In this paper,we investigate the minimization problem e_(s)(p)=_(u∈W_(V)^(1,N))(r^(N)),||u||_(N)^(N)=p>0 inf E(u),where E(u)=1/N∫_(R_(N))|▽_(u)|^(N)dx+1/N∫_(R_(N))V(x)|u|^(N)dx-1/s∫_(R_(N))|u|^(s)dx.Here s>N,V is a spherically symmetric increasing function satisfying V(0)=0,|x|→∞lin V(x)=+∞We discuss the problem in three cases.First,for the case s>2N,e_(s)(ρ)=-∞for anyρ>0.Secondly,for the case N<s<2N,for anyρ>0,we prove that it admits a minimizer which is nonnegative,spherically symmetric and decreasing via the N-Laplacian GagliardoNirenberg inequality.When s=2N,the existence and nonexistence of minimizers of e_(s)(ρ)will also be given.During the arguments,we provide the detailed proof of the N-Laplacian Gagliardo-Nirenberg inequality and N-Laplacian Pohozaev identity. 展开更多
关键词 N-Laplacian Gagliardo-Nirenberg inequality minimizer
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ON THE CONCENTRATION OF STANDING WAVES FOR NLS EQUATION WITH POINT-DIPOLE POTENTIAL
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作者 Jun WANG Xiaoguang LI 《Acta Mathematica Scientia》 2025年第4期1265-1283,共19页
We study the following minimization problem d_(p)(M_(p)=∫_(R^(n))|▽u|^(2)-c|u|^(2)/|x|^(2)+V(x)|u|^(2)dx-2/p+2∫_(R^(N))|u|^p+2dx.when=p=p^(*):=4/N,,the precise concentration behavior of minimizers is analyzed as M_... We study the following minimization problem d_(p)(M_(p)=∫_(R^(n))|▽u|^(2)-c|u|^(2)/|x|^(2)+V(x)|u|^(2)dx-2/p+2∫_(R^(N))|u|^p+2dx.when=p=p^(*):=4/N,,the precise concentration behavior of minimizers is analyzed as M_(p^(*))↗‖Q_(p^(*))‖_(L^(2)),where Q_(p^(*))is the unique radially positive solution of-Δφ-cφ/|x|^(2-|φ|^(p^(*)+1)φ=0.When 0<p<p^(*)we prove that all minimizers must blow up if lim p→p^(*)M_(p)≥‖Q_(p^(*))‖L^(2).On his argument,the detailed concentration behavior of minimizers is established as p↗p^(*). 展开更多
关键词 minimization problem minimizeRS concentration behavior
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Variations in quantifying patient reported outcome measures to estimate treatment effect 被引量:1
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作者 Sathish Muthu Srujun Vadranapu 《World Journal of Methodology》 2025年第2期44-53,共10页
In the practice of healthcare,patient-reported outcomes(PROs)and PRO measures(PROMs)are used as an attempt to observe the changes in complex clinical situations.They guide us in making decisions based on the evidence ... In the practice of healthcare,patient-reported outcomes(PROs)and PRO measures(PROMs)are used as an attempt to observe the changes in complex clinical situations.They guide us in making decisions based on the evidence regarding patient care by recording the change in outcomes for a particular treatment to a given condition and finally to understand whether a patient will benefit from a particular treatment and to quantify the treatment effect.For any PROM to be usable in health care,we need it to be reliable,encapsulating the points of interest with the potential to detect any real change.Using structured outcome measures routinely in clinical practice helps the physician to understand the functional limitation of a patient that would otherwise not be clear in an office interview,and this allows the physician and patient to have a meaningful conver-sation as well as a customized plan for each patient.Having mentioned the rationale and the benefits of PROMs,understanding the quantification process is crucial before embarking on management decisions.A better interpretation of change needs to identify the treatment effect based on clinical relevance for a given condition.There are a multiple set of measurement indices to serve this effect and most of them are used interchangeably without clear demarcation on their differences.This article details the various quantification metrics used to evaluate the treatment effect using PROMs,their limitations and the scope of usage and implementation in clinical practice. 展开更多
关键词 Patient-reported outcome measures Treatment effect Minimal clinical important difference Patient-accepted symptom state Minimum detectable change ORTHOPEDICS
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On-chip cyclic-AWG-based 12 × 12 silicon wavelength routing switches with minimized port-to-port insertion loss fluctuation 被引量:3
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作者 ZEPENG PAN SONGNIAN FU +4 位作者 LULUZI LU DONGYU LI WEIJIE CHANG DEMING LIU MINMING ZHANG 《Photonics Research》 SCIE EI 2018年第5期380-384,共5页
With the rapidly increasing bandwidth requirements of optical communication networks, compact and low-cost large-scale optical switches become necessary. Silicon pbotonics is a promising technology due to its small fo... With the rapidly increasing bandwidth requirements of optical communication networks, compact and low-cost large-scale optical switches become necessary. Silicon pbotonics is a promising technology due to its small footprint, cost competitiveness, and high bandwidth density. In this paper, we demonstrate a 12 × 12 silicon wavelength routing switch employing cascaded arrayed waveguide interconnection network on a the switch's footprint. We single chip. We optimize develop an algorithm based gratings (AWGs) connected by a silicon waveguide the connecting strategy of the crossing structure to reduce on minimum standard deviation to minimize the port-to- port insertion loss (IL) fluctuation of the switch globally. The simulated port-to-port IL fluctuation decreases by about 3 dB compared with that of the conventional one. The average measured port-to-port IL is 13.03 dB, with a standard deviation of 0.78 dB and a fluctuation of 2.39 dB. The device can be used for wide applications in core networks and data centers. 展开更多
关键词 On-chip cyclic-AWG-based 12 × 12 silicon wavelength routing switches minimized port-to-port insertion loss fluctuation
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