AIMTo develop a simplified bioartificial liver (BAL) device prototype, suitable to use freshly and preserved liver Microorgans (LMOs) as biological component. METHODSThe system consists of 140 capillary fibers through...AIMTo develop a simplified bioartificial liver (BAL) device prototype, suitable to use freshly and preserved liver Microorgans (LMOs) as biological component. METHODSThe system consists of 140 capillary fibers through which goat blood is pumped. The evolution of hematocrit, plasma and extra-fiber fluid osmolality was evaluated without any biological component, to characterize the prototype. LMOs were cut and cold stored 48 h in BG35 and ViaSpan<sup>®</sup> solutions. Fresh LMOs were used as controls. After preservation, LMOs were loaded into the BAL and an ammonia overload was added. To assess LMOs viability and functionality, samples were taken to determine lactate dehydrogenase (LDH) release and ammonia detoxification capacity. RESULTSThe concentrations of ammonia and glucose, and the fluids osmolalities were matched after the first hour of perfusion, showing a proper exchange between blood and the biological compartment in the minibioreactor. After 120 min of perfusion, LMOs cold preserved in BG35 and ViaSpan<sup>®</sup> were able to detoxify 52.9% ± 6.5% and 53.6% ± 6.0%, respectively, of the initial ammonia overload. No significant differences were found with Controls (49.3% ± 8.8%, P ®</sup> cold preserved LMOs, respectively (n = 6, P CONCLUSIONThis prototype relied on a simple design and excellent performance. It’s a practical tool to evaluate the detoxification ability of LMOs subjected to different preservation protocols.展开更多
To address the issue of residual pollution caused by polyethylene mulch,this study explored the effects of different mulching methods on the soil environment of the yam field,as well as on yam yield and quality.The ex...To address the issue of residual pollution caused by polyethylene mulch,this study explored the effects of different mulching methods on the soil environment of the yam field,as well as on yam yield and quality.The experiment comprised six treatments in total:one non-mulched treatment served as the control(CK),along with five different film-mulched treatments,namely PE,FZS12,FZS15,FC12,and FC15.The degradation of these films and their effects on soil physicochemical properties,microbial community,yam yield and quality were compared.The results showed that the FZS12 treatment achieved grade 5 degradation by the end of the planting period.Compared with PE treatment,the total soluble sugar content and yield of yam treated with FZS12 were significantly increased by 35.78%and 74.97%,respectively(p<0.05).Compared with CK and PE treatments,FZS12 significantly increased soil available nitrogen by 31.62%and 6.20%,respectively(p<0.05),and significantly increased soil available phosphorus by 8.58%and 4.45%,respectively(p<0.05).Soil pH,available nitrogen,and available phosphorus were the main environmental factors affecting the soil bacterial community.The FZS12 treatment significantly increased the relative abundances of soil bacteria phylum including Acidobacteriota,Myxococcota,Patescibacteria,and Proteobacteria compared with the CK and PE treatments.Functional prediction using Picrust2 revealed that the FZS12 treatment had significantly higher levels of signal transduction and amino acid metabolism than the CK and PE treatments.In conclusion,covering with 12μm PBAT/PLA humic acid biodegradable film enhances yam yield and total soluble sugar content by shaping beneficial soil microbial communities,activating soil nutrients.展开更多
Ecological floating bed is an important biological remediation method for water pollution control.During the removal of excess nutrients and pollutants,changes in environmental factors affect the characteristics of mi...Ecological floating bed is an important biological remediation method for water pollution control.During the removal of excess nutrients and pollutants,changes in environmental factors affect the characteristics of microorganisms in aquatic ecosystems.To understand the influences of ecological floating beds on size-fractionated microorganisms,we investigated the community assembly and nitrogen metabolic characteristics of three size-fractionated microorganism groups in the ecological floating bed area,using 18S rDNA,16S rDNA metabarcoding,and metagenomic sequencing techniques.Firstly,we discovered substantial differences between size-fractionated groups in the diversity and compositions of both microeukaryotic and bacterial communities,as well as the influences of floating beds on specific groups.The floating beds appeared to provide more habitats for heterotrophs and symbiotes while potentially inhibiting the growth of certain phytoplankton(cyanobacteria).Secondly,we observed that microeukaryotic and bacterial communities were predominantly influenced by stochastic and deterministic processes,respectively,and they both exhibited distinct patterns across different size-fractionated groups.Notably,microeukaryotic community assembly demonstrated a greater sensitivity to ecological floating beds,as indicated by an increase in dispersal limitation processes.Finally,the nitrogen metabolism functional genes revealed that microbes associated with large-sized particles played a crucial role in dissimilatory nitrate reduction to ammonium(DNRA)and denitrification processes within the floating bed area,thereby facilitating the removal of excess nitrogen nutrients from the water.In contrast,freeliving microorganisms from small-sized groups were linked mainly to the genes involved in nitrogen assimilation and assimilatory nitrate reduction to ammonium(ANRA)processes.These findings help understand the impact of ecological floating beds on the diversity and functional characteristics of microorganism communities in different size-fractionated groups.展开更多
Environment serves as the pivotal medium to produce fermented food,with fluctuations in environmental factors exerting a profound impact on the modulation of fermentation microbial communities.Such shifts are crucial ...Environment serves as the pivotal medium to produce fermented food,with fluctuations in environmental factors exerting a profound impact on the modulation of fermentation microbial communities.Such shifts are crucial for the distinctiveness of fermented food flavor and the variability in quality.Chinese liquor(Baijiu)is one of the typical representatives of spontaneous fermented food.In this review,the multifaceted relationship between regional environmental attributes and the fermentation dynamics of Baijiu was examined,with a spotlight on the strong-flavor,sauce-flavor,and light-flavor varieties.It reveals the influence of regional environmental factors and brewing environmental factors on microbial function and metabolism,which results in the formation of unique flavor characteristics of Baijiu.The 9 main factors affecting the microecology of Baijiu fermentation were further explored,including environmental sensitivity,microbial interactions,biogeographic patterns,and key abiotic factors such as temperature and humidity.Environmental factor management is crucial for controlling microbial community in fermentation.Intelligent detection of the fermentation system is combined with artificial intelligence to realize the digitalization of Baijiu fermentation,with a view to further studying the environmental mechanism or quantitative control relationship of natural fermentation,improving the environmental stability of natural fermentation,and promoting the mechanization and intelligence of fermentation production.展开更多
Objective To examine national trends in antibiotic consumption and antimicrobial resistance(AMR)among six WHO-priority bacterial pathogens in China from 2016 to 2022.Methods This ecological study analyzed national and...Objective To examine national trends in antibiotic consumption and antimicrobial resistance(AMR)among six WHO-priority bacterial pathogens in China from 2016 to 2022.Methods This ecological study analyzed national and provincial data from the China Antibacterial Resistance Surveillance System(CARSS)and the National Hospital Information Network.Beta regression models assessed temporal trends,and hierarchical models evaluated associations between antibiotic use and resistance.Results From 2016 to 2022,carbapenem resistance in Acinetobacter baumannii and Pseudomonas aeruginosa,and vancomycin resistance in Enterococcus faecium and E.faecalis significantly declined(β<0,P<0.010),while carbapenem-resistant Klebsiella pneumoniae increased(β=0.081,P<0.001).Nationwide antibiotic consumption rose across 10 major classes.Positive associations were found between carbapenem use and resistance in A.baumannii(z=2.719,P=0.007)and P.aeruginosa(z=3.241,P=0.001),and between vancomycin use and resistance in E.faecium(z=4.510,P=0.001)and E.faecalis(z=3.210,P=0.001).Conclusion Carbapenem-resistant K.pneumoniae increased significantly in China,while other resistant pathogens declined.Resistance patterns were linked to the use of multiple antibiotic classes,underscoring the need for strengthened antibiotic stewardship and surveillance.展开更多
Early prevention and control of coal spontaneous combustion have emerged as a critical research area in coal mine safety.Due to their sustainability and environmental friendliness,microorganisms have gained attention....Early prevention and control of coal spontaneous combustion have emerged as a critical research area in coal mine safety.Due to their sustainability and environmental friendliness,microorganisms have gained attention.A filamentous fungus was collected in the coal mine and identified as Absidia spinosa.Results indicated that the mycelium effectively covered and repaired many coal pores.The oxygen consumption ratio of A.spinosa was higher in coal-containing environments than in coal-free conditions.The fungus significantly impacted aliphatic functional groups,disrupting bridging bonds and side chains connected to aromatic structures and reducing the relative content of C—O bonds.Additionally,A.spinosa increases the ignition temperature by 25.34℃.The total heat release was decreased by approximately 32.58%,and the activation energies were increased.The genome of Absidia spinosa revealed genes related to oxygen consumption,small molecule degradation,and secretion of metabolic products,such as those annotated under GO ID:0140657,etc.The pathways involved in the degradation of small organic molecules(e.g.,ko00626,etc.),carbon fixation,and nitrogen cycling,all linked to coal decomposition.Through oxygen consumption and the alteration of coal-active structures,A.spinosa effectively inhibits CSC,providing an experimental basis for exploring eco-friendly biological control methods in the goaf.展开更多
Formate bioconversion plays a crucial role in achieving renewable resource utilization and green and sustainable development,as it helps convert formate to biofuels and biochemicals.However,to tap the full potential o...Formate bioconversion plays a crucial role in achieving renewable resource utilization and green and sustainable development,as it helps convert formate to biofuels and biochemicals.However,to tap the full potential of formate bioconversion,it is important to identify the most appropriate microbial hosts,design the most promising formate assimilation pathways,and develop the most efficient formate assimilation cell factories.Here,we summarize the formatotrophic microorganisms capable of assimilating formate into building blocks of cell growth and analyze the characteristics of formate assimilation pathways for transmitting formate into central carbon metabolism.Furthermore,we discuss microbial engineering strategies to improve the efficiency of formate utilization for producing high-value bioproducts.Finally,we highlight the key challenges of formate bioconversion and their possible solutions to advance the formate bioeconomy and biomanufacturing.展开更多
The present study investigates the flow,heat,and mass transfer analysis in the bioconvection of nanofluid containing motile gyrotactic microorganisms through a semi-porous curved oscillatory channel with a magnetic fi...The present study investigates the flow,heat,and mass transfer analysis in the bioconvection of nanofluid containing motile gyrotactic microorganisms through a semi-porous curved oscillatory channel with a magnetic field.These microorganisms produce density gradients by swimming,which induces macroscopic convection flows in the fluid.This procedure improves the mass and heat transfer,illustrating the interaction between biological activity and fluid dynamics.Furthermore,instead of considering traditional Fourier's and Fick's law the energy and concentration equations are developed by incorporating Cattaneo-Christov double diffusion theory.Moreover,to examine the influence of thermophoresis and Brownian diffusions in the fluid we have adopted the Buongiorno nanofluid model.Due to the oscillation of the surface of the channel,the mathematical development of the considered flow problem is obtained in the form of partial differential equations via the curvilinear coordinate system.The convergent series solution of the governing flow equations is obtained after applying the homotopy analysis method(HAM).The effects of different pertinent flow parameters on velocity,motile microorganism density distribution,concentration,pressure,temperature,and skin friction coefficient are examined and discussed in detail with the help of graphs and tables.It is observed during the current study that the density of microorganisms is enhanced for higher values of Reynolds number,Peclet number,radius of curvature variable,and Lewis number.展开更多
Soil microorganisms and labile soil organic carbon(SOC)fractions are essential factors affecting greenhouse gas(GHG)emissions in paddy fields.However,the effects of labile SOC fractions and microorganisms on GHG emiss...Soil microorganisms and labile soil organic carbon(SOC)fractions are essential factors affecting greenhouse gas(GHG)emissions in paddy fields.However,the effects of labile SOC fractions and microorganisms on GHG emissions from flooding to drying after organic fertilizer replacing for chemical fertilizer remain unclear.Here,a long-term experiment was conducted with four treatments:chemical fertilization only(control),organic fertilizer substituting 25%of chemical N fertilizer(NM1),50%of chemical N fertilizer(NM2),and NM2combined with crop straw(NMS).GHG emissions were monitored,and soil samples were collected to determine labile SOC fractions and microorganisms.Results revealed the GHG emissions in the NM2 significantly increased by 196.88%from flooding to drying,mainly due to the higher CO_(2) emissions.The GHG emissions per kg of C input in NMS was the lowest with the value of 9.17.From flooding to drying,organic fertilizer application significantly increased the readily oxidizable organic carbon(ROC)contents and C lability;the NM2 and NMS dramatically increased the SOC and non-readily oxidizable organic carbon(NROC).The bacterial communities showed significant differences among different treatments in the flooding,while the significant difference was only found between the NMS and other treatments in the drying.From flooding to drying,changing soil moisture conditions causes C fractions and microbial communities to jointly affect carbon emissions,and the NMS promoted carbon sequestration and mitigated GHG emissions.Our findings highlight the importance of the labile SOC fractions and microorganisms linked to GHG emissions in paddy fields.展开更多
Whilst phosphorus(P)in soil is considered to be abundant,the portion available for plant uptake constitutes less than 1%of the overall P present.To enhance crop productivity,the utilization of mineral P fertilizers ha...Whilst phosphorus(P)in soil is considered to be abundant,the portion available for plant uptake constitutes less than 1%of the overall P present.To enhance crop productivity,the utilization of mineral P fertilizers has become pervasive in agriculture.Nonetheless,the escalating prices of chemical fertilizers,coupled with new European regulations prohibiting the use of P fertilizers containing cadmium,have highlighted the urgency to identify environmentally friendly products and practices for P fertilization in agricultural soils.This comprehensive review delves into the current landscape of P fertilization from agricultural,political,and economic standpoints.We recognize the potential of microbes in mobilizing P,but emphasize the necessity for more robust research to establish their effectiveness in promoting plant P uptake under real-world conditions.Additionally,we explore the role of agricultural conservation practices,such as optimal tillage,diversified cropping systems,and increased organic carbon input,in conserving P.Furthermore,this review contemplates forthcoming innovations in research.These innovations encompass the development of enhanced formulations for biofertilizers and the undertaking of more comprehensive studies within the realm of conservation agriculture.All these endeavors collectively hold the potential to augment P accessibility to plants in a sustainable manner,thereby advancing agricultural sustainability and productivity.展开更多
Antimony smelting activities damage the soil and vegetation surroundings while generating economic value.However,no standardizedmethods are available to diagnose the extent of soil degradation at antimony smelting sit...Antimony smelting activities damage the soil and vegetation surroundings while generating economic value.However,no standardizedmethods are available to diagnose the extent of soil degradation at antimony smelting sites.This study developed a standardized framework for assessing soil quality by consideringmicrobial-induced resilience and heavymetal contamination at Xikuangshan antimony smelting site.The soil resilience index(SRI)and soil contamination index(SCI)were calculated byMinimum Data Set and geo-accumulation model,respectively.After standardized by a multi-criteria quantitative procedure of modified Nemerow’s pollution index(NPI),the integrated assessment of soil quality index(SQI),which is the minimumof SRINPI and SCINPI,was achieved.The results showed that Sb and As were the prominent metal(loid)pollutants,and significant correlations between SQI and SRI indicated that the poor soil quality was mainly caused by the low level of soil resilience.The primary limiting factors of SRI were Fungi in high andmiddle contaminated areas,and Skermanella in low contaminated area,suggesting that the weak soil resilience was caused by low specific microbial abundances.Microbial regulation and phytoremediation are greatly required to improve the soil quality at antimony smelting sites from the perspectives of pollution control and resilience improvement.This study improves our understanding of ecological effects of antimony smelting sites and provides a theoretical basis for ecological restoration and sustainable development of mining areas.展开更多
In a recent case report in the World Journal of Clinical Cases,emphasized the crucial role of rapidly and accurately identifying pathogens to optimize patient treatment outcomes.Laboratory-on-a-chip(LOC)technology has...In a recent case report in the World Journal of Clinical Cases,emphasized the crucial role of rapidly and accurately identifying pathogens to optimize patient treatment outcomes.Laboratory-on-a-chip(LOC)technology has emerged as a transformative tool in health care,offering rapid,sensitive,and specific identification of microorganisms.This editorial provides a comprehensive overview of LOC technology,highlighting its principles,advantages,applications,challenges,and future directions.Success studies from the field have demonstrated the practical benefits of LOC devices in clinical diagnostics,epidemiology,and food safety.Comparative studies have underscored the superiority of LOC technology over traditional methods,showcasing improvements in speed,accuracy,and portability.The future integration of LOC with biosensors,artificial intelligence,and data analytics promises further innovation and expansion.This call to action emphasizes the importance of continued research,investment,and adoption to realize the full potential of LOC technology in improving healthcare outcomes worldwide.展开更多
BACKGROUND In the absence of effective antimicrobials,transplant surgery is not viable,and antirejection immunosuppressants cannot be administered,as resistant infections compromise the life-saving goal of organ trans...BACKGROUND In the absence of effective antimicrobials,transplant surgery is not viable,and antirejection immunosuppressants cannot be administered,as resistant infections compromise the life-saving goal of organ transplantation.AIM To evaluate the efficacy of antimicrobials in preventing resistance in solid organ transplant recipients.METHODS A systematic review was conducted using a search methodology consistent with the preferred reporting items for systematic reviews and meta-analyses.This review included randomized clinical trials that evaluated the efficacy of antimicrobial agents(prophylactic or therapeutic)aimed at preventing antimicrobial resistance.The search strategy involved analyzing multiple databases,including PubMed/MEDLINE,Web of Science,Embase,Scopus,and SciELO,as well as examining gray literature sources on Google Scholar.A comprehensive electronic database search was conducted from the databases’inception until May 2024,with no language restrictions.RESULTS After the final phase of the eligibility assessment,this systematic review ultimate-ly included 7 articles.A total of 2318 patients were studied.The most studied microorganisms were cytomegalovirus,although vancomycinresistant enterococci,Clostridioides difficile,and multidrug-resistant Enterobacterales were also analyzed.The antimicrobials used in the interventions were mainly maribavir,valganciclovir,gancic-lovir,and colistin-neomycin.Of concern,all clinical trials showed significant proportions of resistant microorga-nisms after the interventions,with no statistically significant differences between the groups(mean resistance 13.47%vs 14.39%),except for two studies that demonstrated greater efficacy of maribavir and valganciclovir(mean resistance 22.2%vs 41.1%in the control group;P<0.05).The total reported deaths in three clinical trials were 75,and there were 24 graft rejections in two studies.CONCLUSION All clinical trials reported significant proportions of antimicrobial-resistant microorganisms following interventions.More high-quality randomized clinical trials are needed to corroborate these results.展开更多
[Objectives]To systematically investigate the microbial community composition of rhizosphere soil and endophytes associated with Pogostemon cablin,and to explore the relationships between endophytes and rhizosphere mi...[Objectives]To systematically investigate the microbial community composition of rhizosphere soil and endophytes associated with Pogostemon cablin,and to explore the relationships between endophytes and rhizosphere microorganisms as well as their potential applications.[Methods]Microbial isolates were obtained from rhizosphere soil,root tissues,and stem tissues using the serial dilution and spread plate method.These isolates were identified through morphological characterization,physiological and biochemical assays,and molecular biological techniques.[Results]A total of 18 microbial strains were isolated,including 7 bacterial and 11 fungal strains.Among the bacterial isolates,Pseudomonas spp.and Bacillus spp.were predominant,while the fungal isolates were mainly represented by Aspergillus spp.Certain bacterial strains,notably Pseudomonas spp.,exhibited potential abilities for indole-3-acetic acid(IAA)production,nitrogen fixation,and antagonistic activity against pathogenic microorganisms,suggesting their potential utility as biocontrol agents and promoters of plant growth.[Conclusions]This study establishes a foundational understanding of the microbial community characteristics in the rhizosphere and tissues of P.cablin,as well as their roles in plant growth and development.展开更多
Introduction Diatoms,a diverse group of photosynthetic unicellular algae,have gained significant global attention due to their ecological importance and multifaceted applications in scientific research.Their ecologica...Introduction Diatoms,a diverse group of photosynthetic unicellular algae,have gained significant global attention due to their ecological importance and multifaceted applications in scientific research.Their ecological roles are critical,encompassing nutrient cycling,carbon sequestration,and primary productivity,which establish them as essential components of aquatic food webs.The remarkable species richness of diatoms underscores their evolutionary success and highlights their integral roles in both freshwater and marine ecosystems.In addition to their environmental significance,diatoms possess a rich biochemical profile comprising valuable compounds with immense potential for biotechnological applications.These applications span diverse fields,including biofuel production,pharmaceuticals,and wastewater remediation.Despite the vast diversity and biochemical richness of diatoms,laboratory cultivation and maintenance remain challenging.To address these challenges,two primary methodologies have been developed:xenic and axenic culture techniques.Xenic culture involves maintaining diatoms alongside associated microorganisms,thereby replicating natural conditions and preserving ecological interactions.In contrast,axenic culture techniques focus on isolating pure diatom strains by employing meticulous sterilization processes,enabling precise experimental manipulation and fundamental research.Understanding the significance of xenic and axenic cultivation methodologies is essential for unlocking the full potential of diatoms across diverse scientific domains.This review elaborates on the methodologies,scope,and applications of xenic and axenic culture techniques for diatoms.By examining the intricacies of these cultivation approaches,it seeks to provide insights into optimizing diatom culture practices,advancing research initiatives,and harnessing the biotechnological potential of these extraordinary microorganisms.展开更多
The mathematical model for non-Newtonian magnetohydrodynamics flows across a vertically stretched surface with non-linear thermal radiation,mass and heat transfer rates,thermophoretic and Brownian movements,bio-convec...The mathematical model for non-Newtonian magnetohydrodynamics flows across a vertically stretched surface with non-linear thermal radiation,mass and heat transfer rates,thermophoretic and Brownian movements,bio-convection,and motile microbes considered in the present work.It is possible to regulate the nanomaterial suspension in the nanofluid using the growth of microbes.With the use of boundary layer approximation,highly nonlinear partial differential equations were derived for the present flow model.The nonlinear partial differential equations are converted into ordinary differential equations by utilizing similarity transmutations,which simplify them.Numerical elixirs for ordinary differential equations are found through bvp4c.This guarantees accurate results for profiles of temperature,concentration,velocity,and motile density.There is a good match between the numerical values shown graphically and the existing data.As the thermal radiation parameter rises,the flow temperature grows.Increasing Lewis number values is a sharp drop in the nanoparticle volume fraction.Bioconvection Lewis number reduces microorganism profiles.The research work focused on electrical systems,heat transfer,acoustics,chemical processing,rigid body dynamics,fluid mechanics,and solid mechanics,among others.展开更多
To improve crop yields,global food production needs sustainable agronomic tools like Plant Growth-Promoting Rhizobacteria(PGPR).Region-adapted PGPR strains are crucial to increasing peanut production.Argentina is the ...To improve crop yields,global food production needs sustainable agronomic tools like Plant Growth-Promoting Rhizobacteria(PGPR).Region-adapted PGPR strains are crucial to increasing peanut production.Argentina is the seventh-largest peanut producer,and Cordoba is the main region with 250,000 ha(75%of the total sowing area).This study aimed to isolate,identify,and characterize the biocontrol and growth promotion capacity of PGPR strains belonging to the Bacillus and Pseudomonas genera.The strains were tested against Sclerotinia minor,Sclerotium rolfsii,Fusarium verticillioides,and Aspergillus flavus for biocontrol assays.For growth promotion,pot trials used two peanut cultivars,ASEM 400 INTA and Granoleico,under 40%and 60%field capacity under two water regimes.The isolated strains were Bacillus velezensis,B.subtilis,B.tequilensis,B.safensis,B.altitudinis,and Pseudomonas psychrophila.These strains demonstrated in-vitro phosphorus solubilization,nitrogen fixation,ammonification,nitrification,enzyme releasing,phytohormones production,and high biocontrol capacity of over 75%.SC6 and RI3(both B.velezensis)and P10(P.psychrophila)exhibited outstanding performance.They significantly promoted peanut root biomass by more than 50%and leaf area by 30%,with increased chlorophyll content index and leaf relative water content,particularly under water stress conditions(40%field capacity).According to the results,RI3,SC6,and P10 could be classified as PGPR,which supports the results obtained in other field studies with these same microorganisms.Future investigations should prioritize the development of industrial formulations to assess their effectiveness in alternative crops and to incorporate them into other agricultural practices.展开更多
In Burkina Faso, as in other African countries, infertility has become a social burden for the population and a public health problem. Male infertility accounts for 30% to 40% of all infertility cases. The diagnosis o...In Burkina Faso, as in other African countries, infertility has become a social burden for the population and a public health problem. Male infertility accounts for 30% to 40% of all infertility cases. The diagnosis of male infertility or hypofertility is often made by a simple laboratory analysis of sperm to explore sperm parameters. In most African countries, such as Burkina Faso, microbiological analysis in the context of sperm analysis is still not developed, and is carried out solely based on microscopy and traditional culture, which does not allow the growth of fragile and demanding bacteria. Our study investigated the microorganisms of sperm that may be involved in male infertility, using conventional bacteriology techniques and real-time PCR. However, it did not intend to perform a multivariate statistical association analysis to estimate the association of microorganisms with abnormal semen parameters. This prospective cross-sectional pilot study was carried out on patients who visited the bacteriology laboratory of Centre MURAZ, a research Institute in Burkina Faso, for male infertility diagnosis between 2 August and 31 August 2021. Bacteria were isolated and identified using standard bacteriology techniques. In parallel, common pathogenic microorganisms known to be associated with male infertility were targeted and detected in the sperm using a multiplex real-time PCR assay. A total of 38 sperm samples were analyzed by bacteriological culture and bacteria isolated were Staphylococcus aureus (S. aureus) 5.55%, Klebsiella pneumoniae (K. pneumoniae), Enterococcus faecalis (E. faecalis), Streptococcus agalactiae (S. agalactiae) and Staphylococcus hoemalyticus (S. hoemalyticus) respectively 2.70%. Real-time PCR targeted and detected Chlamydia trachomatis (C. trachomatis) at 7.89%, Ureaplasma urealyticum (U. urealyticum) at 21.05%, Ureaplasma parvum (U. parvum) at 18.42%, Mycoplasma hominis (M. hominis) at 15.79%, Mycoplasma genitalium (M. genitalium) at 10.53% and Trichomonas vaginalis (T. vaginalis) at 2.63%. Neisseria gonorrhoeae (N. gonorrhoeae) was targeted by the real-time PCR assay and was not detected (0%) in the tested semen samples. Our study highlights critical limitations of culture performance (low sensitivity), particularly in Burkina Faso, which has a total inability to detect microorganisms (fragile and demanding microorganisms) detected by PCR-based assays. There is therefore an urgent need to at least optimize culture, procedures and algorithms for detection of microorganisms associated with male infertility in clinical laboratories of Burkina Faso. The most effective solution is the routine implementation of molecular diagnostic methods.展开更多
[Objectives]To explore the effects of high soil temperature stress on microorganisms utilizing different carbon sources in the rhizosphere of pepper seedlings.[Methods]Using seedlings of the main pepper cultivar‘Reyi...[Objectives]To explore the effects of high soil temperature stress on microorganisms utilizing different carbon sources in the rhizosphere of pepper seedlings.[Methods]Using seedlings of the main pepper cultivar‘Reyin 1’as experimental materials,five soil temperature gradients(25,30,35,40,and 45℃)were established.After a 96 d cultivation,soil nutrient content and soil microbial functional diversity were measured to elucidate the impact of high soil temperature on the soil microenvironment.[Results]As soil temperature increased,the contents of total nitrogen,alkaline hydrolyzable nitrogen,available phosphorus,and rapidly available potassium generally showed a decreasing trend.However,under the 45℃ treatment,the contents of total nitrogen,available phosphorus,and rapidly available potassium were the highest among all treatments,although the alkaline hydrolyzable nitrogen content was significantly lower compared to the other treatments.BIOLOG analysis revealed that with increasing soil temperature,the average soil microbial absorbance value and the Shannon diversity index decreased significantly.In contrast,the Shannon evenness index and the Simpson dominance index showed no significant differences across the different temperature treatments.This indicates that as soil temperature rises,the carbon source utilization capacity of the soil microbial community decreases,leading to reduced overall carbon metabolic activity and microbial functional diversity,while the dominant microbial populations remained unchanged during this process.Principal component analysis further confirmed effective separation among the different temperature treatments,suggesting that high soil stress significantly altered the structure of the soil microbial community.[Conclusions]In practical production,appropriate measures should be taken to decrease soil temperature to create a favorable rhizosphere microenvironment and thereby promote crop growth.展开更多
Electrochemiluminescence(ECL)technology has emerged as a pivotal tool in the field of pathogen detection due to its high sensitivity,strong specificity,operational convenience,and adaptability to complex biological sa...Electrochemiluminescence(ECL)technology has emerged as a pivotal tool in the field of pathogen detection due to its high sensitivity,strong specificity,operational convenience,and adaptability to complex biological samples.This paper systematically elucidates the fundamental mechanisms and classification characteristics of ECL technology,with a particular focus on its applications in detecting nucleic acids,proteins,metabolites,and drug-resistant mutants of pathogenic microorganisms.Through comparative analysis with traditional detection methods,the technological advantages and suitable scenarios of ECL are highlighted.Furthermore,this paper delves into the existing challenges of ECL technology in clinical applications,providing a theoretical basis for advancing its translational use in pathogen diagnostics.展开更多
文摘AIMTo develop a simplified bioartificial liver (BAL) device prototype, suitable to use freshly and preserved liver Microorgans (LMOs) as biological component. METHODSThe system consists of 140 capillary fibers through which goat blood is pumped. The evolution of hematocrit, plasma and extra-fiber fluid osmolality was evaluated without any biological component, to characterize the prototype. LMOs were cut and cold stored 48 h in BG35 and ViaSpan<sup>®</sup> solutions. Fresh LMOs were used as controls. After preservation, LMOs were loaded into the BAL and an ammonia overload was added. To assess LMOs viability and functionality, samples were taken to determine lactate dehydrogenase (LDH) release and ammonia detoxification capacity. RESULTSThe concentrations of ammonia and glucose, and the fluids osmolalities were matched after the first hour of perfusion, showing a proper exchange between blood and the biological compartment in the minibioreactor. After 120 min of perfusion, LMOs cold preserved in BG35 and ViaSpan<sup>®</sup> were able to detoxify 52.9% ± 6.5% and 53.6% ± 6.0%, respectively, of the initial ammonia overload. No significant differences were found with Controls (49.3% ± 8.8%, P ®</sup> cold preserved LMOs, respectively (n = 6, P CONCLUSIONThis prototype relied on a simple design and excellent performance. It’s a practical tool to evaluate the detoxification ability of LMOs subjected to different preservation protocols.
基金supported by the Wencheng County Science and Technology Plan Project(2023NKY03)Earmarked Fund for Modern Agro-industry Technology Research System(Grant Number CARS-24-B04,CARS-23-B05)Additional support was provided by Key Laboratory of Biology and Genetic Improvement of Horticultural Crops(Vegetables),Ministry of Agriculture and Rural Affairs,China.
文摘To address the issue of residual pollution caused by polyethylene mulch,this study explored the effects of different mulching methods on the soil environment of the yam field,as well as on yam yield and quality.The experiment comprised six treatments in total:one non-mulched treatment served as the control(CK),along with five different film-mulched treatments,namely PE,FZS12,FZS15,FC12,and FC15.The degradation of these films and their effects on soil physicochemical properties,microbial community,yam yield and quality were compared.The results showed that the FZS12 treatment achieved grade 5 degradation by the end of the planting period.Compared with PE treatment,the total soluble sugar content and yield of yam treated with FZS12 were significantly increased by 35.78%and 74.97%,respectively(p<0.05).Compared with CK and PE treatments,FZS12 significantly increased soil available nitrogen by 31.62%and 6.20%,respectively(p<0.05),and significantly increased soil available phosphorus by 8.58%and 4.45%,respectively(p<0.05).Soil pH,available nitrogen,and available phosphorus were the main environmental factors affecting the soil bacterial community.The FZS12 treatment significantly increased the relative abundances of soil bacteria phylum including Acidobacteriota,Myxococcota,Patescibacteria,and Proteobacteria compared with the CK and PE treatments.Functional prediction using Picrust2 revealed that the FZS12 treatment had significantly higher levels of signal transduction and amino acid metabolism than the CK and PE treatments.In conclusion,covering with 12μm PBAT/PLA humic acid biodegradable film enhances yam yield and total soluble sugar content by shaping beneficial soil microbial communities,activating soil nutrients.
基金Supported by the National Natural Science Foundation of China(Nos.42141003,42176147)the National Key Research and Development Program of China(No.2022YFF0802204)the Xiamen Key Laboratory of Urban Sea Ecological Conservation and Restoration(USER)(Nos.USER2021-1,USER2021-5)。
文摘Ecological floating bed is an important biological remediation method for water pollution control.During the removal of excess nutrients and pollutants,changes in environmental factors affect the characteristics of microorganisms in aquatic ecosystems.To understand the influences of ecological floating beds on size-fractionated microorganisms,we investigated the community assembly and nitrogen metabolic characteristics of three size-fractionated microorganism groups in the ecological floating bed area,using 18S rDNA,16S rDNA metabarcoding,and metagenomic sequencing techniques.Firstly,we discovered substantial differences between size-fractionated groups in the diversity and compositions of both microeukaryotic and bacterial communities,as well as the influences of floating beds on specific groups.The floating beds appeared to provide more habitats for heterotrophs and symbiotes while potentially inhibiting the growth of certain phytoplankton(cyanobacteria).Secondly,we observed that microeukaryotic and bacterial communities were predominantly influenced by stochastic and deterministic processes,respectively,and they both exhibited distinct patterns across different size-fractionated groups.Notably,microeukaryotic community assembly demonstrated a greater sensitivity to ecological floating beds,as indicated by an increase in dispersal limitation processes.Finally,the nitrogen metabolism functional genes revealed that microbes associated with large-sized particles played a crucial role in dissimilatory nitrate reduction to ammonium(DNRA)and denitrification processes within the floating bed area,thereby facilitating the removal of excess nitrogen nutrients from the water.In contrast,freeliving microorganisms from small-sized groups were linked mainly to the genes involved in nitrogen assimilation and assimilatory nitrate reduction to ammonium(ANRA)processes.These findings help understand the impact of ecological floating beds on the diversity and functional characteristics of microorganism communities in different size-fractionated groups.
基金financially supported by the National Natural Science Foundation of China(22138004)National Treasure Ecological Research Synergetic Innovation Center.
文摘Environment serves as the pivotal medium to produce fermented food,with fluctuations in environmental factors exerting a profound impact on the modulation of fermentation microbial communities.Such shifts are crucial for the distinctiveness of fermented food flavor and the variability in quality.Chinese liquor(Baijiu)is one of the typical representatives of spontaneous fermented food.In this review,the multifaceted relationship between regional environmental attributes and the fermentation dynamics of Baijiu was examined,with a spotlight on the strong-flavor,sauce-flavor,and light-flavor varieties.It reveals the influence of regional environmental factors and brewing environmental factors on microbial function and metabolism,which results in the formation of unique flavor characteristics of Baijiu.The 9 main factors affecting the microecology of Baijiu fermentation were further explored,including environmental sensitivity,microbial interactions,biogeographic patterns,and key abiotic factors such as temperature and humidity.Environmental factor management is crucial for controlling microbial community in fermentation.Intelligent detection of the fermentation system is combined with artificial intelligence to realize the digitalization of Baijiu fermentation,with a view to further studying the environmental mechanism or quantitative control relationship of natural fermentation,improving the environmental stability of natural fermentation,and promoting the mechanization and intelligence of fermentation production.
基金supported by the Beijing Natural Science Foundation(L242149)Research Project on High Quality Development of Hospital Pharmacy,National Institute of Hospital Administration,NHC,China(NIHAYS2332)+1 种基金National High Level Hospital Clinical Research Funding(BJ-2023-199)Capital Funds for Health Improvement and Research(CFH)(2024-1-4052).
文摘Objective To examine national trends in antibiotic consumption and antimicrobial resistance(AMR)among six WHO-priority bacterial pathogens in China from 2016 to 2022.Methods This ecological study analyzed national and provincial data from the China Antibacterial Resistance Surveillance System(CARSS)and the National Hospital Information Network.Beta regression models assessed temporal trends,and hierarchical models evaluated associations between antibiotic use and resistance.Results From 2016 to 2022,carbapenem resistance in Acinetobacter baumannii and Pseudomonas aeruginosa,and vancomycin resistance in Enterococcus faecium and E.faecalis significantly declined(β<0,P<0.010),while carbapenem-resistant Klebsiella pneumoniae increased(β=0.081,P<0.001).Nationwide antibiotic consumption rose across 10 major classes.Positive associations were found between carbapenem use and resistance in A.baumannii(z=2.719,P=0.007)and P.aeruginosa(z=3.241,P=0.001),and between vancomycin use and resistance in E.faecium(z=4.510,P=0.001)and E.faecalis(z=3.210,P=0.001).Conclusion Carbapenem-resistant K.pneumoniae increased significantly in China,while other resistant pathogens declined.Resistance patterns were linked to the use of multiple antibiotic classes,underscoring the need for strengthened antibiotic stewardship and surveillance.
基金supported by the National Natural Science Foundation of China(No.51974128)the National Key Research and Development Program of China(No.2023YFC3009105)。
文摘Early prevention and control of coal spontaneous combustion have emerged as a critical research area in coal mine safety.Due to their sustainability and environmental friendliness,microorganisms have gained attention.A filamentous fungus was collected in the coal mine and identified as Absidia spinosa.Results indicated that the mycelium effectively covered and repaired many coal pores.The oxygen consumption ratio of A.spinosa was higher in coal-containing environments than in coal-free conditions.The fungus significantly impacted aliphatic functional groups,disrupting bridging bonds and side chains connected to aromatic structures and reducing the relative content of C—O bonds.Additionally,A.spinosa increases the ignition temperature by 25.34℃.The total heat release was decreased by approximately 32.58%,and the activation energies were increased.The genome of Absidia spinosa revealed genes related to oxygen consumption,small molecule degradation,and secretion of metabolic products,such as those annotated under GO ID:0140657,etc.The pathways involved in the degradation of small organic molecules(e.g.,ko00626,etc.),carbon fixation,and nitrogen cycling,all linked to coal decomposition.Through oxygen consumption and the alteration of coal-active structures,A.spinosa effectively inhibits CSC,providing an experimental basis for exploring eco-friendly biological control methods in the goaf.
基金supported by the National Natural Science Foundation of China(22378166)the Basic Research Program of Jiangsu and Jiangsu Basic Research Center for Synthetic Biology(BK20233003)+1 种基金the Fundamental Research Funds for the Central Universities(JUSRP622001)the Open Funding Project of Key Laboratory of Industrial Biotechnology Ministry of Education(KLIB-KF202403).
文摘Formate bioconversion plays a crucial role in achieving renewable resource utilization and green and sustainable development,as it helps convert formate to biofuels and biochemicals.However,to tap the full potential of formate bioconversion,it is important to identify the most appropriate microbial hosts,design the most promising formate assimilation pathways,and develop the most efficient formate assimilation cell factories.Here,we summarize the formatotrophic microorganisms capable of assimilating formate into building blocks of cell growth and analyze the characteristics of formate assimilation pathways for transmitting formate into central carbon metabolism.Furthermore,we discuss microbial engineering strategies to improve the efficiency of formate utilization for producing high-value bioproducts.Finally,we highlight the key challenges of formate bioconversion and their possible solutions to advance the formate bioeconomy and biomanufacturing.
文摘The present study investigates the flow,heat,and mass transfer analysis in the bioconvection of nanofluid containing motile gyrotactic microorganisms through a semi-porous curved oscillatory channel with a magnetic field.These microorganisms produce density gradients by swimming,which induces macroscopic convection flows in the fluid.This procedure improves the mass and heat transfer,illustrating the interaction between biological activity and fluid dynamics.Furthermore,instead of considering traditional Fourier's and Fick's law the energy and concentration equations are developed by incorporating Cattaneo-Christov double diffusion theory.Moreover,to examine the influence of thermophoresis and Brownian diffusions in the fluid we have adopted the Buongiorno nanofluid model.Due to the oscillation of the surface of the channel,the mathematical development of the considered flow problem is obtained in the form of partial differential equations via the curvilinear coordinate system.The convergent series solution of the governing flow equations is obtained after applying the homotopy analysis method(HAM).The effects of different pertinent flow parameters on velocity,motile microorganism density distribution,concentration,pressure,temperature,and skin friction coefficient are examined and discussed in detail with the help of graphs and tables.It is observed during the current study that the density of microorganisms is enhanced for higher values of Reynolds number,Peclet number,radius of curvature variable,and Lewis number.
基金the support of the National Natural Science Foundation of China(No.42107247)the National Key Research and Development Project(No.2022YFD1901605)+1 种基金the Natural Science Foundation of Sichuan Province(Nos.2025YFHZ0142 and 2024NSFSC0800)the Tobacco Science Foundation of Sichuan Province(No.SCYC202407)。
文摘Soil microorganisms and labile soil organic carbon(SOC)fractions are essential factors affecting greenhouse gas(GHG)emissions in paddy fields.However,the effects of labile SOC fractions and microorganisms on GHG emissions from flooding to drying after organic fertilizer replacing for chemical fertilizer remain unclear.Here,a long-term experiment was conducted with four treatments:chemical fertilization only(control),organic fertilizer substituting 25%of chemical N fertilizer(NM1),50%of chemical N fertilizer(NM2),and NM2combined with crop straw(NMS).GHG emissions were monitored,and soil samples were collected to determine labile SOC fractions and microorganisms.Results revealed the GHG emissions in the NM2 significantly increased by 196.88%from flooding to drying,mainly due to the higher CO_(2) emissions.The GHG emissions per kg of C input in NMS was the lowest with the value of 9.17.From flooding to drying,organic fertilizer application significantly increased the readily oxidizable organic carbon(ROC)contents and C lability;the NM2 and NMS dramatically increased the SOC and non-readily oxidizable organic carbon(NROC).The bacterial communities showed significant differences among different treatments in the flooding,while the significant difference was only found between the NMS and other treatments in the drying.From flooding to drying,changing soil moisture conditions causes C fractions and microbial communities to jointly affect carbon emissions,and the NMS promoted carbon sequestration and mitigated GHG emissions.Our findings highlight the importance of the labile SOC fractions and microorganisms linked to GHG emissions in paddy fields.
基金financed by the Spanish Ministry of Science and Innovation and the European Regional Development Fund(ERDF)(No.PID20211234690BI00)the European Joint Program EJP_Soil(TRACE-Soils)(No.862695)+1 种基金the Spanish Ministry of Science and Innovation(RED2018-102624TMCIN/AEI/10.13039/501100011033)the Project PREPSOIL European Union(No.101070045,HORIZON CSA)。
文摘Whilst phosphorus(P)in soil is considered to be abundant,the portion available for plant uptake constitutes less than 1%of the overall P present.To enhance crop productivity,the utilization of mineral P fertilizers has become pervasive in agriculture.Nonetheless,the escalating prices of chemical fertilizers,coupled with new European regulations prohibiting the use of P fertilizers containing cadmium,have highlighted the urgency to identify environmentally friendly products and practices for P fertilization in agricultural soils.This comprehensive review delves into the current landscape of P fertilization from agricultural,political,and economic standpoints.We recognize the potential of microbes in mobilizing P,but emphasize the necessity for more robust research to establish their effectiveness in promoting plant P uptake under real-world conditions.Additionally,we explore the role of agricultural conservation practices,such as optimal tillage,diversified cropping systems,and increased organic carbon input,in conserving P.Furthermore,this review contemplates forthcoming innovations in research.These innovations encompass the development of enhanced formulations for biofertilizers and the undertaking of more comprehensive studies within the realm of conservation agriculture.All these endeavors collectively hold the potential to augment P accessibility to plants in a sustainable manner,thereby advancing agricultural sustainability and productivity.
基金supported by the National Key Research and Development Program of China (No.2019YFC1803604)the National Natural Science Foundation of China (Nos.42007306 and 42277193).
文摘Antimony smelting activities damage the soil and vegetation surroundings while generating economic value.However,no standardizedmethods are available to diagnose the extent of soil degradation at antimony smelting sites.This study developed a standardized framework for assessing soil quality by consideringmicrobial-induced resilience and heavymetal contamination at Xikuangshan antimony smelting site.The soil resilience index(SRI)and soil contamination index(SCI)were calculated byMinimum Data Set and geo-accumulation model,respectively.After standardized by a multi-criteria quantitative procedure of modified Nemerow’s pollution index(NPI),the integrated assessment of soil quality index(SQI),which is the minimumof SRINPI and SCINPI,was achieved.The results showed that Sb and As were the prominent metal(loid)pollutants,and significant correlations between SQI and SRI indicated that the poor soil quality was mainly caused by the low level of soil resilience.The primary limiting factors of SRI were Fungi in high andmiddle contaminated areas,and Skermanella in low contaminated area,suggesting that the weak soil resilience was caused by low specific microbial abundances.Microbial regulation and phytoremediation are greatly required to improve the soil quality at antimony smelting sites from the perspectives of pollution control and resilience improvement.This study improves our understanding of ecological effects of antimony smelting sites and provides a theoretical basis for ecological restoration and sustainable development of mining areas.
文摘In a recent case report in the World Journal of Clinical Cases,emphasized the crucial role of rapidly and accurately identifying pathogens to optimize patient treatment outcomes.Laboratory-on-a-chip(LOC)technology has emerged as a transformative tool in health care,offering rapid,sensitive,and specific identification of microorganisms.This editorial provides a comprehensive overview of LOC technology,highlighting its principles,advantages,applications,challenges,and future directions.Success studies from the field have demonstrated the practical benefits of LOC devices in clinical diagnostics,epidemiology,and food safety.Comparative studies have underscored the superiority of LOC technology over traditional methods,showcasing improvements in speed,accuracy,and portability.The future integration of LOC with biosensors,artificial intelligence,and data analytics promises further innovation and expansion.This call to action emphasizes the importance of continued research,investment,and adoption to realize the full potential of LOC technology in improving healthcare outcomes worldwide.
文摘BACKGROUND In the absence of effective antimicrobials,transplant surgery is not viable,and antirejection immunosuppressants cannot be administered,as resistant infections compromise the life-saving goal of organ transplantation.AIM To evaluate the efficacy of antimicrobials in preventing resistance in solid organ transplant recipients.METHODS A systematic review was conducted using a search methodology consistent with the preferred reporting items for systematic reviews and meta-analyses.This review included randomized clinical trials that evaluated the efficacy of antimicrobial agents(prophylactic or therapeutic)aimed at preventing antimicrobial resistance.The search strategy involved analyzing multiple databases,including PubMed/MEDLINE,Web of Science,Embase,Scopus,and SciELO,as well as examining gray literature sources on Google Scholar.A comprehensive electronic database search was conducted from the databases’inception until May 2024,with no language restrictions.RESULTS After the final phase of the eligibility assessment,this systematic review ultimate-ly included 7 articles.A total of 2318 patients were studied.The most studied microorganisms were cytomegalovirus,although vancomycinresistant enterococci,Clostridioides difficile,and multidrug-resistant Enterobacterales were also analyzed.The antimicrobials used in the interventions were mainly maribavir,valganciclovir,gancic-lovir,and colistin-neomycin.Of concern,all clinical trials showed significant proportions of resistant microorga-nisms after the interventions,with no statistically significant differences between the groups(mean resistance 13.47%vs 14.39%),except for two studies that demonstrated greater efficacy of maribavir and valganciclovir(mean resistance 22.2%vs 41.1%in the control group;P<0.05).The total reported deaths in three clinical trials were 75,and there were 24 graft rejections in two studies.CONCLUSION All clinical trials reported significant proportions of antimicrobial-resistant microorganisms following interventions.More high-quality randomized clinical trials are needed to corroborate these results.
基金Supported by Rural Science and Technology Commissioner Project of Guangdong Province(KTP20240806).
文摘[Objectives]To systematically investigate the microbial community composition of rhizosphere soil and endophytes associated with Pogostemon cablin,and to explore the relationships between endophytes and rhizosphere microorganisms as well as their potential applications.[Methods]Microbial isolates were obtained from rhizosphere soil,root tissues,and stem tissues using the serial dilution and spread plate method.These isolates were identified through morphological characterization,physiological and biochemical assays,and molecular biological techniques.[Results]A total of 18 microbial strains were isolated,including 7 bacterial and 11 fungal strains.Among the bacterial isolates,Pseudomonas spp.and Bacillus spp.were predominant,while the fungal isolates were mainly represented by Aspergillus spp.Certain bacterial strains,notably Pseudomonas spp.,exhibited potential abilities for indole-3-acetic acid(IAA)production,nitrogen fixation,and antagonistic activity against pathogenic microorganisms,suggesting their potential utility as biocontrol agents and promoters of plant growth.[Conclusions]This study establishes a foundational understanding of the microbial community characteristics in the rhizosphere and tissues of P.cablin,as well as their roles in plant growth and development.
文摘Introduction Diatoms,a diverse group of photosynthetic unicellular algae,have gained significant global attention due to their ecological importance and multifaceted applications in scientific research.Their ecological roles are critical,encompassing nutrient cycling,carbon sequestration,and primary productivity,which establish them as essential components of aquatic food webs.The remarkable species richness of diatoms underscores their evolutionary success and highlights their integral roles in both freshwater and marine ecosystems.In addition to their environmental significance,diatoms possess a rich biochemical profile comprising valuable compounds with immense potential for biotechnological applications.These applications span diverse fields,including biofuel production,pharmaceuticals,and wastewater remediation.Despite the vast diversity and biochemical richness of diatoms,laboratory cultivation and maintenance remain challenging.To address these challenges,two primary methodologies have been developed:xenic and axenic culture techniques.Xenic culture involves maintaining diatoms alongside associated microorganisms,thereby replicating natural conditions and preserving ecological interactions.In contrast,axenic culture techniques focus on isolating pure diatom strains by employing meticulous sterilization processes,enabling precise experimental manipulation and fundamental research.Understanding the significance of xenic and axenic cultivation methodologies is essential for unlocking the full potential of diatoms across diverse scientific domains.This review elaborates on the methodologies,scope,and applications of xenic and axenic culture techniques for diatoms.By examining the intricacies of these cultivation approaches,it seeks to provide insights into optimizing diatom culture practices,advancing research initiatives,and harnessing the biotechnological potential of these extraordinary microorganisms.
基金U.F.-G.was supported by the Mobility Lab Foundation,a governmental organization of the Provincial Council of Araba,and the local council of Vitoria-Gasteiz.S.Noeiaghdam was supported by the Henan Academy of Sciences(Project No.241819246).
文摘The mathematical model for non-Newtonian magnetohydrodynamics flows across a vertically stretched surface with non-linear thermal radiation,mass and heat transfer rates,thermophoretic and Brownian movements,bio-convection,and motile microbes considered in the present work.It is possible to regulate the nanomaterial suspension in the nanofluid using the growth of microbes.With the use of boundary layer approximation,highly nonlinear partial differential equations were derived for the present flow model.The nonlinear partial differential equations are converted into ordinary differential equations by utilizing similarity transmutations,which simplify them.Numerical elixirs for ordinary differential equations are found through bvp4c.This guarantees accurate results for profiles of temperature,concentration,velocity,and motile density.There is a good match between the numerical values shown graphically and the existing data.As the thermal radiation parameter rises,the flow temperature grows.Increasing Lewis number values is a sharp drop in the nanoparticle volume fraction.Bioconvection Lewis number reduces microorganism profiles.The research work focused on electrical systems,heat transfer,acoustics,chemical processing,rigid body dynamics,fluid mechanics,and solid mechanics,among others.
基金the Universidad Nacional de Co rdoba,Argentina,and the Secretaría de Cienciay Tecnología (UNC,SECyT) for the financial support of the CONSOLIDAR 2018–2022 project‘EFECTO DE LOS MICROORGANISMOS PROMOTORES DEL CRECIMIENTO SOBRE LA ECOFISIOLOGíA Y EL CONTROL DE ENFERMEDADES EN EL CULTIVO DE MANí.'the Consejo Nacional de Investigaciones Científicas y Técnicas(CONICET) for the doctoral fellowshipthe University of Córdoba (Spain) for the support provided through the “Plan Propio de Investigación” 2020–2024。
文摘To improve crop yields,global food production needs sustainable agronomic tools like Plant Growth-Promoting Rhizobacteria(PGPR).Region-adapted PGPR strains are crucial to increasing peanut production.Argentina is the seventh-largest peanut producer,and Cordoba is the main region with 250,000 ha(75%of the total sowing area).This study aimed to isolate,identify,and characterize the biocontrol and growth promotion capacity of PGPR strains belonging to the Bacillus and Pseudomonas genera.The strains were tested against Sclerotinia minor,Sclerotium rolfsii,Fusarium verticillioides,and Aspergillus flavus for biocontrol assays.For growth promotion,pot trials used two peanut cultivars,ASEM 400 INTA and Granoleico,under 40%and 60%field capacity under two water regimes.The isolated strains were Bacillus velezensis,B.subtilis,B.tequilensis,B.safensis,B.altitudinis,and Pseudomonas psychrophila.These strains demonstrated in-vitro phosphorus solubilization,nitrogen fixation,ammonification,nitrification,enzyme releasing,phytohormones production,and high biocontrol capacity of over 75%.SC6 and RI3(both B.velezensis)and P10(P.psychrophila)exhibited outstanding performance.They significantly promoted peanut root biomass by more than 50%and leaf area by 30%,with increased chlorophyll content index and leaf relative water content,particularly under water stress conditions(40%field capacity).According to the results,RI3,SC6,and P10 could be classified as PGPR,which supports the results obtained in other field studies with these same microorganisms.Future investigations should prioritize the development of industrial formulations to assess their effectiveness in alternative crops and to incorporate them into other agricultural practices.
文摘In Burkina Faso, as in other African countries, infertility has become a social burden for the population and a public health problem. Male infertility accounts for 30% to 40% of all infertility cases. The diagnosis of male infertility or hypofertility is often made by a simple laboratory analysis of sperm to explore sperm parameters. In most African countries, such as Burkina Faso, microbiological analysis in the context of sperm analysis is still not developed, and is carried out solely based on microscopy and traditional culture, which does not allow the growth of fragile and demanding bacteria. Our study investigated the microorganisms of sperm that may be involved in male infertility, using conventional bacteriology techniques and real-time PCR. However, it did not intend to perform a multivariate statistical association analysis to estimate the association of microorganisms with abnormal semen parameters. This prospective cross-sectional pilot study was carried out on patients who visited the bacteriology laboratory of Centre MURAZ, a research Institute in Burkina Faso, for male infertility diagnosis between 2 August and 31 August 2021. Bacteria were isolated and identified using standard bacteriology techniques. In parallel, common pathogenic microorganisms known to be associated with male infertility were targeted and detected in the sperm using a multiplex real-time PCR assay. A total of 38 sperm samples were analyzed by bacteriological culture and bacteria isolated were Staphylococcus aureus (S. aureus) 5.55%, Klebsiella pneumoniae (K. pneumoniae), Enterococcus faecalis (E. faecalis), Streptococcus agalactiae (S. agalactiae) and Staphylococcus hoemalyticus (S. hoemalyticus) respectively 2.70%. Real-time PCR targeted and detected Chlamydia trachomatis (C. trachomatis) at 7.89%, Ureaplasma urealyticum (U. urealyticum) at 21.05%, Ureaplasma parvum (U. parvum) at 18.42%, Mycoplasma hominis (M. hominis) at 15.79%, Mycoplasma genitalium (M. genitalium) at 10.53% and Trichomonas vaginalis (T. vaginalis) at 2.63%. Neisseria gonorrhoeae (N. gonorrhoeae) was targeted by the real-time PCR assay and was not detected (0%) in the tested semen samples. Our study highlights critical limitations of culture performance (low sensitivity), particularly in Burkina Faso, which has a total inability to detect microorganisms (fragile and demanding microorganisms) detected by PCR-based assays. There is therefore an urgent need to at least optimize culture, procedures and algorithms for detection of microorganisms associated with male infertility in clinical laboratories of Burkina Faso. The most effective solution is the routine implementation of molecular diagnostic methods.
基金Supported by Natural Science Foundation of Hainan Province(320MS108)Scientific and Technological Innovation Team of the National Center for Tropical Agricultural Science,Chinese Academy of Tropical Agricultural Sciences(CATASCXTD202303)Key Laboratory of Genetic Resources Utilization of Spice and Beverage Crops,Ministry of Agriculture and Rural Affairs,Hainan Provincial Key Laboratory of Genetic Improvement and Quality Regulation for Tropical Spice and Beverage Crops,or Hainan Provincial Engineering Research Center for Tropical Spice and Beverage Crops(2019xys007).
文摘[Objectives]To explore the effects of high soil temperature stress on microorganisms utilizing different carbon sources in the rhizosphere of pepper seedlings.[Methods]Using seedlings of the main pepper cultivar‘Reyin 1’as experimental materials,five soil temperature gradients(25,30,35,40,and 45℃)were established.After a 96 d cultivation,soil nutrient content and soil microbial functional diversity were measured to elucidate the impact of high soil temperature on the soil microenvironment.[Results]As soil temperature increased,the contents of total nitrogen,alkaline hydrolyzable nitrogen,available phosphorus,and rapidly available potassium generally showed a decreasing trend.However,under the 45℃ treatment,the contents of total nitrogen,available phosphorus,and rapidly available potassium were the highest among all treatments,although the alkaline hydrolyzable nitrogen content was significantly lower compared to the other treatments.BIOLOG analysis revealed that with increasing soil temperature,the average soil microbial absorbance value and the Shannon diversity index decreased significantly.In contrast,the Shannon evenness index and the Simpson dominance index showed no significant differences across the different temperature treatments.This indicates that as soil temperature rises,the carbon source utilization capacity of the soil microbial community decreases,leading to reduced overall carbon metabolic activity and microbial functional diversity,while the dominant microbial populations remained unchanged during this process.Principal component analysis further confirmed effective separation among the different temperature treatments,suggesting that high soil stress significantly altered the structure of the soil microbial community.[Conclusions]In practical production,appropriate measures should be taken to decrease soil temperature to create a favorable rhizosphere microenvironment and thereby promote crop growth.
基金supported by the Joint Funds for the innovation of science and Technology,Fujian province(Grant number:2021Y9014).
文摘Electrochemiluminescence(ECL)technology has emerged as a pivotal tool in the field of pathogen detection due to its high sensitivity,strong specificity,operational convenience,and adaptability to complex biological samples.This paper systematically elucidates the fundamental mechanisms and classification characteristics of ECL technology,with a particular focus on its applications in detecting nucleic acids,proteins,metabolites,and drug-resistant mutants of pathogenic microorganisms.Through comparative analysis with traditional detection methods,the technological advantages and suitable scenarios of ECL are highlighted.Furthermore,this paper delves into the existing challenges of ECL technology in clinical applications,providing a theoretical basis for advancing its translational use in pathogen diagnostics.
