The Financial Technology(FinTech)sector has witnessed rapid growth,resulting in increasingly complex and high-volume digital transactions.Although this expansion improves efficiency and accessibility,it also introduce...The Financial Technology(FinTech)sector has witnessed rapid growth,resulting in increasingly complex and high-volume digital transactions.Although this expansion improves efficiency and accessibility,it also introduces significant vulnerabilities,including fraud,money laundering,and market manipulation.Traditional anomaly detection techniques often fail to capture the relational and dynamic characteristics of financial data.Graph Neural Networks(GNNs),capable of modeling intricate interdependencies among entities,have emerged as a powerful framework for detecting subtle and sophisticated anomalies.However,the high-dimensionality and inherent noise of FinTech datasets demand robust feature selection strategies to improve model scalability,performance,and interpretability.This paper presents a comprehensive survey of GNN-based approaches for anomaly detection in FinTech,with an emphasis on the synergistic role of feature selection.We examine the theoretical foundations of GNNs,review state-of-the-art feature selection techniques,analyze their integration with GNNs,and categorize prevalent anomaly types in FinTech applications.In addition,we discuss practical implementation challenges,highlight representative case studies,and propose future research directions to advance the field of graph-based anomaly detection in financial systems.展开更多
With the increasing complexity of vehicular networks and the proliferation of connected vehicles,Federated Learning(FL)has emerged as a critical framework for decentralized model training while preserving data privacy...With the increasing complexity of vehicular networks and the proliferation of connected vehicles,Federated Learning(FL)has emerged as a critical framework for decentralized model training while preserving data privacy.However,efficient client selection and adaptive weight allocation in heterogeneous and non-IID environments remain challenging.To address these issues,we propose Federated Learning with Client Selection and Adaptive Weighting(FedCW),a novel algorithm that leverages adaptive client selection and dynamic weight allocation for optimizing model convergence in real-time vehicular networks.FedCW selects clients based on their Euclidean distance from the global model and dynamically adjusts aggregation weights to optimize both data diversity and model convergence.Experimental results show that FedCW significantly outperforms existing FL algorithms such as FedAvg,FedProx,and SCAFFOLD,particularly in non-IID settings,achieving faster convergence,higher accuracy,and reduced communication overhead.These findings demonstrate that FedCW provides an effective solution for enhancing the performance of FL in heterogeneous,edge-based computing environments.展开更多
High-dimensional data causes difficulties in machine learning due to high time consumption and large memory requirements.In particular,in amulti-label environment,higher complexity is required asmuch as the number of ...High-dimensional data causes difficulties in machine learning due to high time consumption and large memory requirements.In particular,in amulti-label environment,higher complexity is required asmuch as the number of labels.Moreover,an optimization problem that fully considers all dependencies between features and labels is difficult to solve.In this study,we propose a novel regression-basedmulti-label feature selectionmethod that integrates mutual information to better exploit the underlying data structure.By incorporating mutual information into the regression formulation,the model captures not only linear relationships but also complex non-linear dependencies.The proposed objective function simultaneously considers three types of relationships:(1)feature redundancy,(2)featurelabel relevance,and(3)inter-label dependency.These three quantities are computed usingmutual information,allowing the proposed formulation to capture nonlinear dependencies among variables.These three types of relationships are key factors in multi-label feature selection,and our method expresses them within a unified formulation,enabling efficient optimization while simultaneously accounting for all of them.To efficiently solve the proposed optimization problem under non-negativity constraints,we develop a gradient-based optimization algorithm with fast convergence.Theexperimental results on sevenmulti-label datasets show that the proposed method outperforms existingmulti-label feature selection techniques.展开更多
Populus species,important economic species combining rapid growth with broad ecological adaptability,play a critical role in sustainable forestry and bioenergy production.In this study,we performed whole-genome resequ...Populus species,important economic species combining rapid growth with broad ecological adaptability,play a critical role in sustainable forestry and bioenergy production.In this study,we performed whole-genome resequencing of 707 individuals from a full-sib family to develop comprehensive single nucleotide polymorphism(SNP)markers and constructed a high-density genetic linkage map of 19 linkage groups.The total genetic length of the map reached 3623.65 cM with an average marker interval of 0.34 cM.By integrating multidimensional phenotypic data,89 quantitative trait loci(QTL)associated with growth,wood physical and chemical properties,disease resistance,and leaf morphology traits were identified,with logarithm of odds(LOD)scores ranging from 3.13 to 21.72 Notably,pleiotropic analysis revealed significant colocaliza and phenotypic variance explained between 1.7% and 11.6%.-tion hotspots on chromosomes LG1,LG5,LG6,LG8,and LG14,with epistatic interaction network analysis confirming genetic basis of coordinated regulation across multiple traits.Functional annotation of 207 candidate genes showed that R2R3-MYB and bHLH transcription factors and pyruvate kinase-encoding genes were significantly enriched,suggesting crucial roles in lignin biosynthesis and carbon metabolic pathways.Allelic effect analysis indicated that the frequency of favorable alleles associated with target traits ranged from 0.20 to 0.55.Incorporation of QTL-derived favorable alleles as random effects into Bayesian-based genomic selection models led to an increase in prediction accuracy ranging from 1% to 21%,with Bayesian ridge regression as the best predictive model.This study provides valuable genomic resources and genetic insights for deciphering complex trait architecture and advancing molecular breeding in poplar.展开更多
The advantages of genome selection(GS) in animal and plant breeding are self-evident.Traditional parametric models have disadvantage in better fit the increasingly large sequencing data and capture complex effects acc...The advantages of genome selection(GS) in animal and plant breeding are self-evident.Traditional parametric models have disadvantage in better fit the increasingly large sequencing data and capture complex effects accurately.Machine learning models have demonstrated remarkable potential in addressing these challenges.In this study,we introduced the concept of mixed kernel functions to explore the performance of support vector machine regression(SVR) in GS.Six single kernel functions(SVR_L,SVR_C,SVR_G,SVR_P,SVR_S,SVR_L) and four mixed kernel functions(SVR_GS,SVR_GP,SVR_LS,SVR_LP) were used to predict genome breeding values.The prediction accuracy,mean squared error(MSE) and mean absolute error(MAE) were used as evaluation indicators to compare with two traditional parametric models(GBLUP,BayesB) and two popular machine learning models(RF,KcRR).The results indicate that in most cases,the performance of the mixed kernel function model significantly outperforms that of GBLUP,BayesB and single kernel function.For instance,for T1 in the pig dataset,the predictive accuracy of SVR_GS is improved by 10% compared to GBLUP,and by approximately 4.4 and 18.6% compared to SVR_G and SVR_S respectively.For E1 in the wheat dataset,SVR_GS achieves 13.3% higher prediction accuracy than GBLUP.Among single kernel functions,the Laplacian and Gaussian kernel functions yield similar results,with the Gaussian kernel function performing better.The mixed kernel function notably reduces the MSE and MAE when compared to all single kernel functions.Furthermore,regarding runtime,SVR_GS and SVR_GP mixed kernel functions run approximately three times faster than GBLUP in the pig dataset,with only a slight increase in runtime compared to the single kernel function model.In summary,the mixed kernel function model of SVR demonstrates speed and accuracy competitiveness,and the model such as SVR_GS has important application potential for GS.展开更多
Most predictive maintenance studies have emphasized accuracy but provide very little focus on Interpretability or deployment readiness.This study improves on prior methods by developing a small yet robust system that ...Most predictive maintenance studies have emphasized accuracy but provide very little focus on Interpretability or deployment readiness.This study improves on prior methods by developing a small yet robust system that can predict when turbofan engines will fail.It uses the NASA CMAPSS dataset,which has over 200,000 engine cycles from260 engines.The process begins with systematic preprocessing,which includes imputation,outlier removal,scaling,and labelling of the remaining useful life.Dimensionality is reduced using a hybrid selection method that combines variance filtering,recursive elimination,and gradient-boosted importance scores,yielding a stable set of 10 informative sensors.To mitigate class imbalance,minority cases are oversampled,and class-weighted losses are applied during training.Benchmarking is carried out with logistic regression,gradient boosting,and a recurrent design that integrates gated recurrent units with long short-term memory networks.The Long Short-Term Memory–Gated Recurrent Unit(LSTM–GRU)hybrid achieved the strongest performance with an F1 score of 0.92,precision of 0.93,recall of 0.91,ReceiverOperating Characteristic–AreaUnder the Curve(ROC-AUC)of 0.97,andminority recall of 0.75.Interpretability testing using permutation importance and Shapley values indicates that sensors 13,15,and 11 are the most important indicators of engine wear.The proposed system combines imbalance handling,feature reduction,and Interpretability into a practical design suitable for real industrial settings.展开更多
Feature selection serves as a critical preprocessing step inmachine learning,focusing on identifying and preserving the most relevant features to improve the efficiency and performance of classification algorithms.Par...Feature selection serves as a critical preprocessing step inmachine learning,focusing on identifying and preserving the most relevant features to improve the efficiency and performance of classification algorithms.Particle Swarm Optimization has demonstrated significant potential in addressing feature selection challenges.However,there are inherent limitations in Particle Swarm Optimization,such as the delicate balance between exploration and exploitation,susceptibility to local optima,and suboptimal convergence rates,hinder its performance.To tackle these issues,this study introduces a novel Leveraged Opposition-Based Learning method within Fitness Landscape Particle Swarm Optimization,tailored for wrapper-based feature selection.The proposed approach integrates:(1)a fitness-landscape adaptive strategy to dynamically balance exploration and exploitation,(2)the lever principle within Opposition-Based Learning to improve search efficiency,and(3)a Local Selection and Re-optimization mechanism combined with random perturbation to expedite convergence and enhance the quality of the optimal feature subset.The effectiveness of is rigorously evaluated on 24 benchmark datasets and compared against 13 advancedmetaheuristic algorithms.Experimental results demonstrate that the proposed method outperforms the compared algorithms in classification accuracy on over half of the datasets,whilst also significantly reducing the number of selected features.These findings demonstrate its effectiveness and robustness in feature selection tasks.展开更多
Existing feature selection methods for intrusion detection systems in the Industrial Internet of Things often suffer from local optimality and high computational complexity.These challenges hinder traditional IDS from...Existing feature selection methods for intrusion detection systems in the Industrial Internet of Things often suffer from local optimality and high computational complexity.These challenges hinder traditional IDS from effectively extracting features while maintaining detection accuracy.This paper proposes an industrial Internet ofThings intrusion detection feature selection algorithm based on an improved whale optimization algorithm(GSLDWOA).The aim is to address the problems that feature selection algorithms under high-dimensional data are prone to,such as local optimality,long detection time,and reduced accuracy.First,the initial population’s diversity is increased using the Gaussian Mutation mechanism.Then,Non-linear Shrinking Factor balances global exploration and local development,avoiding premature convergence.Lastly,Variable-step Levy Flight operator and Dynamic Differential Evolution strategy are introduced to improve the algorithm’s search efficiency and convergence accuracy in highdimensional feature space.Experiments on the NSL-KDD and WUSTL-IIoT-2021 datasets demonstrate that the feature subset selected by GSLDWOA significantly improves detection performance.Compared to the traditional WOA algorithm,the detection rate and F1-score increased by 3.68%and 4.12%.On the WUSTL-IIoT-2021 dataset,accuracy,recall,and F1-score all exceed 99.9%.展开更多
Unconfined Compressive Strength(UCS)is a key parameter for the assessment of the stability and performance of stabilized soils,yet traditional laboratory testing is both time and resource intensive.In this study,an in...Unconfined Compressive Strength(UCS)is a key parameter for the assessment of the stability and performance of stabilized soils,yet traditional laboratory testing is both time and resource intensive.In this study,an interpretable machine learning approach to UCS prediction is presented,pairing five models(Random Forest(RF),Gradient Boosting(GB),Extreme Gradient Boosting(XGB),CatBoost,and K-Nearest Neighbors(KNN))with SHapley Additive exPlanations(SHAP)for enhanced interpretability and to guide feature removal.A complete dataset of 12 geotechnical and chemical parameters,i.e.,Atterberg limits,compaction properties,stabilizer chemistry,dosage,curing time,was used to train and test the models.R2,RMSE,MSE,and MAE were used to assess performance.Initial results with all 12 features indicated that boosting-based models(GB,XGB,CatBoost)exhibited the highest predictive accuracy(R^(2)=0.93)with satisfactory generalization on test data,followed by RF and KNN.SHAP analysis consistently picked CaO content,curing time,stabilizer dosage,and compaction parameters as the most important features,aligning with established soil stabilization mechanisms.Models were then re-trained on the top 8 and top 5 SHAP-ranked features.Interestingly,GB,XGB,and CatBoost maintained comparable accuracy with reduced input sets,while RF was moderately sensitive and KNN was somewhat better owing to reduced dimensionality.The findings confirm that feature reduction through SHAP enables cost-effective UCS prediction through the reduction of laboratory test requirements without significant accuracy loss.The suggested hybrid approach offers an explainable,interpretable,and cost-effective tool for geotechnical engineering practice.展开更多
Automated essay scoring(AES)systems have gained significant importance in educational settings,offering a scalable,efficient,and objective method for evaluating student essays.However,developing AES systems for Arabic...Automated essay scoring(AES)systems have gained significant importance in educational settings,offering a scalable,efficient,and objective method for evaluating student essays.However,developing AES systems for Arabic poses distinct challenges due to the language’s complex morphology,diglossia,and the scarcity of annotated datasets.This paper presents a hybrid approach to Arabic AES by combining text-based,vector-based,and embeddingbased similarity measures to improve essay scoring accuracy while minimizing the training data required.Using a large Arabic essay dataset categorized into thematic groups,the study conducted four experiments to evaluate the impact of feature selection,data size,and model performance.Experiment 1 established a baseline using a non-machine learning approach,selecting top-N correlated features to predict essay scores.The subsequent experiments employed 5-fold cross-validation.Experiment 2 showed that combining embedding-based,text-based,and vector-based features in a Random Forest(RF)model achieved an R2 of 88.92%and an accuracy of 83.3%within a 0.5-point tolerance.Experiment 3 further refined the feature selection process,demonstrating that 19 correlated features yielded optimal results,improving R2 to 88.95%.In Experiment 4,an optimal data efficiency training approach was introduced,where training data portions increased from 5%to 50%.The study found that using just 10%of the data achieved near-peak performance,with an R2 of 85.49%,emphasizing an effective trade-off between performance and computational costs.These findings highlight the potential of the hybrid approach for developing scalable Arabic AES systems,especially in low-resource environments,addressing linguistic challenges while ensuring efficient data usage.展开更多
In the quest to enhance energy efficiency and reduce environmental impact in the transportation sector,the recovery of waste heat from diesel engines has become a critical area of focus.This study provided an exhausti...In the quest to enhance energy efficiency and reduce environmental impact in the transportation sector,the recovery of waste heat from diesel engines has become a critical area of focus.This study provided an exhaustive thermodynamic analysis optimizing Organic Rankine Cycle(ORC)systems forwaste heat recovery fromdiesel engines.Thestudy assessed the performance of five candidateworking fluids—R11,R123,R113,R245fa,and R141b—under a range of operating conditions,specifically varying overheat temperatures and evaporation pressures.The results indicated that the choice of working fluid substantially influences the system’s exergetic efficiency,net output power,and thermal efficiency.R245fa showed an outstanding net output power of 30.39 kW at high overheat conditions,outperforming R11,which is significant for high-temperature waste heat recovery.At lower temperatures,R11 and R113 demonstrated higher exergetic efficiencies,with R11 reaching a peak exergetic efficiency of 7.4%at an evaporation pressure of 10 bar and an overheat of 10℃.The study also revealed that controlling the overheat and optimizing the evaporation pressure are crucial for enhancing the net output power of the ORC system.Specifically,at an evaporation pressure of 30 bar and an overheat of 0℃,R113 exhibited the lowest exergetic destruction of 544.5 kJ/kg,making it a suitable choice for minimizing irreversible losses.These findings are instrumental for understanding the performance of ORC systems in waste heat recovery applications and offer valuable insights for the design and operation of more efficient and environmentally friendly diesel engine systems.展开更多
Multi-label feature selection(MFS)is a crucial dimensionality reduction technique aimed at identifying informative features associated with multiple labels.However,traditional centralized methods face significant chal...Multi-label feature selection(MFS)is a crucial dimensionality reduction technique aimed at identifying informative features associated with multiple labels.However,traditional centralized methods face significant challenges in privacy-sensitive and distributed settings,often neglecting label dependencies and suffering from low computational efficiency.To address these issues,we introduce a novel framework,Fed-MFSDHBCPSO—federated MFS via dual-layer hybrid breeding cooperative particle swarm optimization algorithm with manifold and sparsity regularization(DHBCPSO-MSR).Leveraging the federated learning paradigm,Fed-MFSDHBCPSO allows clients to perform local feature selection(FS)using DHBCPSO-MSR.Locally selected feature subsets are encrypted with differential privacy(DP)and transmitted to a central server,where they are securely aggregated and refined through secure multi-party computation(SMPC)until global convergence is achieved.Within each client,DHBCPSO-MSR employs a dual-layer FS strategy.The inner layer constructs sample and label similarity graphs,generates Laplacian matrices to capture the manifold structure between samples and labels,and applies L2,1-norm regularization to sparsify the feature subset,yielding an optimized feature weight matrix.The outer layer uses a hybrid breeding cooperative particle swarm optimization algorithm to further refine the feature weight matrix and identify the optimal feature subset.The updated weight matrix is then fed back to the inner layer for further optimization.Comprehensive experiments on multiple real-world multi-label datasets demonstrate that Fed-MFSDHBCPSO consistently outperforms both centralized and federated baseline methods across several key evaluation metrics.展开更多
Emerging and powerful genome editing tools,particularly CRISPR/Cas9,are facilitating functional genomics research and accelerating crop improvement(Jiang et al.2021;Cao et al.2023;Chen C et al.2023;Liu et al.2023a).Ho...Emerging and powerful genome editing tools,particularly CRISPR/Cas9,are facilitating functional genomics research and accelerating crop improvement(Jiang et al.2021;Cao et al.2023;Chen C et al.2023;Liu et al.2023a).However,the detection and screening of transgenic lines remain major bottlenecks,being time-consuming,labor-intensive,and inefficient during transformation and subsequent mutation identification.A simple and efficient visual marker system plays a critical role in addressing these challenges.Recent studies demonstrated that the GmW1 and RUBY reporter systems were used to obtain visual transgenic soybean(Glycine max) plants(Chen L et al.2023;Chen et al.2024).展开更多
1000-Grain weight and spikelet number per panicle are two important components for rice grain yield. In our previous study, eight quantitative trait loci （QTLs） conferring spikelet number per panicle and 1000-grain ...1000-Grain weight and spikelet number per panicle are two important components for rice grain yield. In our previous study, eight quantitative trait loci （QTLs） conferring spikelet number per panicle and 1000-grain weight were mapped through sequencing-based genotyping of 150 rice recombinant inbred lines （RILs）. In this study, we validated the effects of four QTLs from Nipponbare using chromosome segment substitution lines （CSSLs）, and pyramided eight grain yield related QTLs. The new lines containing the eight QTLs with positive effects showed increased panicle and spikelet size as compared with the parent variety 93-11. We further proposed a novel pyramid breeding scheme based on marker-assistant and phenotype selection （MAPS）. This scheme allowed pyramiding of as many as 24 QTLs at a single hybridization without massive cross work. This study provided insights into the molecular basis of rice grain yield for direct wealth for high-yielding rice breeding.展开更多
[Objective] The aim was to study the supporting raising technology of Castanea mollissima Blume molecular marker-assisted selection to reduce the cost and time for chestnut breeding.[Method] To find the best cutting m...[Objective] The aim was to study the supporting raising technology of Castanea mollissima Blume molecular marker-assisted selection to reduce the cost and time for chestnut breeding.[Method] To find the best cutting method,10 treatments were designed according to transverse diameter and vertical diameter of the chestnut including different cutting ratios in 1/2,1/3,1/4 and different directions about cross cutting,vertical cutting,bevel cutting and two side-cutting.The germination rate,seedling survival rate and morphological indicators of the treatments were measured;significant difference among them was also analyzed.[Result] 1/3 bevel cutting was the best,which not only could give high germination rate and survival rate,but also could guarantee high quality of nursery stock,which did not grow so differently with the untreated seedlings.[Conclusion] This way can not only reduce too much cost and time for seedling breeding,but also promote the germination of chestnut in advance,which could do much good to production.展开更多
Rice with low glutelin content is suitable as functional food for patients affected with diabetes and kidney failure. The fine mapping of the gene(s) responsible for low glutelin content will provide information regar...Rice with low glutelin content is suitable as functional food for patients affected with diabetes and kidney failure. The fine mapping of the gene(s) responsible for low glutelin content will provide information regarding the distribution of glutelin related genes in rice genome and will generate markers for the selection of low glutelin rice varieties. Following an SDS-PAGE screen of rice germplasm from Taihu Valley of China, Japonica selection W3660 is identified to be a novel mutant characterized with low glutelin content. For fine mapping the mutant gene for low glutelin content, F2 and F3 populations were derived from a cross between W3660 and Jingrennuo. SDS-PAGE analysis of the total endosperm protein showed that the low glutelin content trait was controlled by a single dominant nuclear gene. Genetic mapping, using SSRs, located this gene to chromosome 2, in the region between SSR2-001/SSR2-004 and RM1358. The dis- tances of the two markers to the target gene were 1.1 cM and 3.8 cM respectively. By semi-quantitative RT-PCR analysis, the transcripts of GluB4/GluB5 genes located within the region do not change. However, GluB5 gene located proximal to SSR2-001/SSR2-004 was specifically reduced. SSR profiles of seven Japonica varieties were compared with that of W3660 for loci in the relevant genetic region. The markers SSR2-004 and RM1358 were used for marker- assisted selection. The selection efficiencies of SSR2-004 and RM1358 were 96.8% and 92.7% respectively. This provides a standard starting point for the breeding of low glutelin content rice varieties in China.展开更多
The resistance in tomato plants to bacterial speck caused by Pseudomonas syringae pv. tomato is triggered by the interactions between the plant resistance protein Pto and the pathogen avirulence proteins AvrPto or Avr...The resistance in tomato plants to bacterial speck caused by Pseudomonas syringae pv. tomato is triggered by the interactions between the plant resistance protein Pto and the pathogen avirulence proteins AvrPto or AvrPtoB. Fen is a gene encoding closely related functional protein kinases as the Pto gene. To investigate the status of resistance to the pathogen and natural variation of Pto and Fen genes in tomato, 67 lines including 29 growing in China were subject to disease resistance evaluation and fenthion-sensitivity test. Alleles of Pto and Fen were amplified from genomic DNA of 25 tomato lines using polymerase chain reaction （PCR） and sequences were determined by sequencing the PCR products. The results indicated that none of the 29 cultivars/hybrids growing in China were resistant to bacterial speck race 0 strain DC3000. Seven of eight tomato lines resistant to DC3000 were also fenthion-sensitive. Analysis of deduced amino acid sequences identified three novel residue substitutions between Pto and pto, and one new substitution identified between Fen and fen. A PCR-based marker was developed and successfully used to select plants with resistance to DC3000.展开更多
A high-yielding japonica rice variety, Wuyunjing 7, bred in Jiangsu Province, China as a female parent was crossed with a Japanese rice variety Kantou 194, which carries a rice stripe disease resistance gene Stv-b＇ a...A high-yielding japonica rice variety, Wuyunjing 7, bred in Jiangsu Province, China as a female parent was crossed with a Japanese rice variety Kantou 194, which carries a rice stripe disease resistance gene Stv-b＇ and a translucent endosperm mutant gene Wx-mq. From F2 generations, a sequence characterized amplified region （SCAR） marker tightly linked with Stv-b＇ and a cleaved amplified polymorphic sequence （CAPS） marker for Wx-mq were used for marker-assisted selection. Finally, a new japonica rice line, Ning 9108, with excellent agronomic traits was obtained by multi-generational selection on stripe disease resistance and endosperm appearance. The utilization of the markers from genes related to rice quality and disease resistance was helpful not only for establishing a marker-assisted selection system of high-quality and disease resistance for rice but also for providing important intermediate materials and rapid selection method for good quality, disease resistance and high yield in rice breeding.展开更多
Fusarium head blight(FHB)is one of the most detrimental wheat diseases which greatly decreases the yield and grain quality,especially in the middle and lower reaches of the Yangtze River of China.Fhb1 and Fhb2 are two...Fusarium head blight(FHB)is one of the most detrimental wheat diseases which greatly decreases the yield and grain quality,especially in the middle and lower reaches of the Yangtze River of China.Fhb1 and Fhb2 are two major resistance loci against Fusarium graminearum.Yangmai 15(YM15)is one of the most popular varieties in the middle and lower reaches of the Yangtze River,and it has good weak gluten characters but poor resistance to FHB.Here we used Fhb1 and Fhb2 to improve the FHB resistance of YM15 by a molecular marker-assisted selection(MAS)backcrossing strategy.The selection of agronomic traits was performed for each generation.We successfully selected seven introgressed lines which carry homozygous Fhb1 and Fhb2 with significantly higher FHB resistance than the recurrent parent YM15.Three of the introgressed lines had agronomic and quality characters that were similar to YM15.This study demonstrates that the pyramiding of Fhb1 and Fhb2 could significantly improve the FHB resistance in wheat using the MAS approach.展开更多
This review updates the present status of the field of molecular markers and marker-assisted selection(MAS),using the example of drought tolerance in barley.The accuracy of selected quantitative trait loci(QTLs),candi...This review updates the present status of the field of molecular markers and marker-assisted selection(MAS),using the example of drought tolerance in barley.The accuracy of selected quantitative trait loci(QTLs),candidate genes and suggested markers was assessed in the barley genome cv.Morex.Six common strategies are described for molecular marker development,candidate gene identification and verification,and their possible applications in MAS to improve the grain yield and yield components in barley under drought stress.These strategies are based on the following five principles:(1)Molecular markers are designated as genomic‘tags’,and their‘prediction’is strongly dependent on their distance from a candidate gene on genetic or physical maps;(2)plants react differently under favourable and stressful conditions or depending on their stage of development;(3)each candidate gene must be verified by confirming its expression in the relevant conditions,e.g.,drought;(4)the molecular marker identified must be validated for MAS for tolerance to drought stress and improved grain yield;and(5)the small number of molecular markers realized for MAS in breeding,from among the many studies targeting candidate genes,can be explained by the complex nature of drought stress,and multiple stress-responsive genes in each barley genotype that are expressed differentially depending on many other factors.展开更多
基金supported by Ho Chi Minh City Open University,Vietnam under grant number E2024.02.1CD and Suan Sunandha Rajabhat University,Thailand.
文摘The Financial Technology(FinTech)sector has witnessed rapid growth,resulting in increasingly complex and high-volume digital transactions.Although this expansion improves efficiency and accessibility,it also introduces significant vulnerabilities,including fraud,money laundering,and market manipulation.Traditional anomaly detection techniques often fail to capture the relational and dynamic characteristics of financial data.Graph Neural Networks(GNNs),capable of modeling intricate interdependencies among entities,have emerged as a powerful framework for detecting subtle and sophisticated anomalies.However,the high-dimensionality and inherent noise of FinTech datasets demand robust feature selection strategies to improve model scalability,performance,and interpretability.This paper presents a comprehensive survey of GNN-based approaches for anomaly detection in FinTech,with an emphasis on the synergistic role of feature selection.We examine the theoretical foundations of GNNs,review state-of-the-art feature selection techniques,analyze their integration with GNNs,and categorize prevalent anomaly types in FinTech applications.In addition,we discuss practical implementation challenges,highlight representative case studies,and propose future research directions to advance the field of graph-based anomaly detection in financial systems.
文摘With the increasing complexity of vehicular networks and the proliferation of connected vehicles,Federated Learning(FL)has emerged as a critical framework for decentralized model training while preserving data privacy.However,efficient client selection and adaptive weight allocation in heterogeneous and non-IID environments remain challenging.To address these issues,we propose Federated Learning with Client Selection and Adaptive Weighting(FedCW),a novel algorithm that leverages adaptive client selection and dynamic weight allocation for optimizing model convergence in real-time vehicular networks.FedCW selects clients based on their Euclidean distance from the global model and dynamically adjusts aggregation weights to optimize both data diversity and model convergence.Experimental results show that FedCW significantly outperforms existing FL algorithms such as FedAvg,FedProx,and SCAFFOLD,particularly in non-IID settings,achieving faster convergence,higher accuracy,and reduced communication overhead.These findings demonstrate that FedCW provides an effective solution for enhancing the performance of FL in heterogeneous,edge-based computing environments.
基金supported by Basic Science Research Program through the National Research Foundation of Korea(NRF)funded by the Ministry of Education(RS-2020-NR049579).
文摘High-dimensional data causes difficulties in machine learning due to high time consumption and large memory requirements.In particular,in amulti-label environment,higher complexity is required asmuch as the number of labels.Moreover,an optimization problem that fully considers all dependencies between features and labels is difficult to solve.In this study,we propose a novel regression-basedmulti-label feature selectionmethod that integrates mutual information to better exploit the underlying data structure.By incorporating mutual information into the regression formulation,the model captures not only linear relationships but also complex non-linear dependencies.The proposed objective function simultaneously considers three types of relationships:(1)feature redundancy,(2)featurelabel relevance,and(3)inter-label dependency.These three quantities are computed usingmutual information,allowing the proposed formulation to capture nonlinear dependencies among variables.These three types of relationships are key factors in multi-label feature selection,and our method expresses them within a unified formulation,enabling efficient optimization while simultaneously accounting for all of them.To efficiently solve the proposed optimization problem under non-negativity constraints,we develop a gradient-based optimization algorithm with fast convergence.Theexperimental results on sevenmulti-label datasets show that the proposed method outperforms existingmulti-label feature selection techniques.
基金supported by the National Key Research and Development Plan of China(2021YFD2200202)the Key Research and Development Project of Jiangsu Province,China(BE2021366).
文摘Populus species,important economic species combining rapid growth with broad ecological adaptability,play a critical role in sustainable forestry and bioenergy production.In this study,we performed whole-genome resequencing of 707 individuals from a full-sib family to develop comprehensive single nucleotide polymorphism(SNP)markers and constructed a high-density genetic linkage map of 19 linkage groups.The total genetic length of the map reached 3623.65 cM with an average marker interval of 0.34 cM.By integrating multidimensional phenotypic data,89 quantitative trait loci(QTL)associated with growth,wood physical and chemical properties,disease resistance,and leaf morphology traits were identified,with logarithm of odds(LOD)scores ranging from 3.13 to 21.72 Notably,pleiotropic analysis revealed significant colocaliza and phenotypic variance explained between 1.7% and 11.6%.-tion hotspots on chromosomes LG1,LG5,LG6,LG8,and LG14,with epistatic interaction network analysis confirming genetic basis of coordinated regulation across multiple traits.Functional annotation of 207 candidate genes showed that R2R3-MYB and bHLH transcription factors and pyruvate kinase-encoding genes were significantly enriched,suggesting crucial roles in lignin biosynthesis and carbon metabolic pathways.Allelic effect analysis indicated that the frequency of favorable alleles associated with target traits ranged from 0.20 to 0.55.Incorporation of QTL-derived favorable alleles as random effects into Bayesian-based genomic selection models led to an increase in prediction accuracy ranging from 1% to 21%,with Bayesian ridge regression as the best predictive model.This study provides valuable genomic resources and genetic insights for deciphering complex trait architecture and advancing molecular breeding in poplar.
基金supported by the China Agriculture Research System of MOF and MARAthe National Natural Science Foundation of China (31872337 and 31501919)the Agricultural Science and Technology Innovation Project,China (ASTIP-IAS02)。
文摘The advantages of genome selection(GS) in animal and plant breeding are self-evident.Traditional parametric models have disadvantage in better fit the increasingly large sequencing data and capture complex effects accurately.Machine learning models have demonstrated remarkable potential in addressing these challenges.In this study,we introduced the concept of mixed kernel functions to explore the performance of support vector machine regression(SVR) in GS.Six single kernel functions(SVR_L,SVR_C,SVR_G,SVR_P,SVR_S,SVR_L) and four mixed kernel functions(SVR_GS,SVR_GP,SVR_LS,SVR_LP) were used to predict genome breeding values.The prediction accuracy,mean squared error(MSE) and mean absolute error(MAE) were used as evaluation indicators to compare with two traditional parametric models(GBLUP,BayesB) and two popular machine learning models(RF,KcRR).The results indicate that in most cases,the performance of the mixed kernel function model significantly outperforms that of GBLUP,BayesB and single kernel function.For instance,for T1 in the pig dataset,the predictive accuracy of SVR_GS is improved by 10% compared to GBLUP,and by approximately 4.4 and 18.6% compared to SVR_G and SVR_S respectively.For E1 in the wheat dataset,SVR_GS achieves 13.3% higher prediction accuracy than GBLUP.Among single kernel functions,the Laplacian and Gaussian kernel functions yield similar results,with the Gaussian kernel function performing better.The mixed kernel function notably reduces the MSE and MAE when compared to all single kernel functions.Furthermore,regarding runtime,SVR_GS and SVR_GP mixed kernel functions run approximately three times faster than GBLUP in the pig dataset,with only a slight increase in runtime compared to the single kernel function model.In summary,the mixed kernel function model of SVR demonstrates speed and accuracy competitiveness,and the model such as SVR_GS has important application potential for GS.
基金supported by the Deanship of Scientific Research,Vice Presidency for Graduate Studies and Scientific Research,King Faisal University,Saudi Arabia Grant No.KFU253765.
文摘Most predictive maintenance studies have emphasized accuracy but provide very little focus on Interpretability or deployment readiness.This study improves on prior methods by developing a small yet robust system that can predict when turbofan engines will fail.It uses the NASA CMAPSS dataset,which has over 200,000 engine cycles from260 engines.The process begins with systematic preprocessing,which includes imputation,outlier removal,scaling,and labelling of the remaining useful life.Dimensionality is reduced using a hybrid selection method that combines variance filtering,recursive elimination,and gradient-boosted importance scores,yielding a stable set of 10 informative sensors.To mitigate class imbalance,minority cases are oversampled,and class-weighted losses are applied during training.Benchmarking is carried out with logistic regression,gradient boosting,and a recurrent design that integrates gated recurrent units with long short-term memory networks.The Long Short-Term Memory–Gated Recurrent Unit(LSTM–GRU)hybrid achieved the strongest performance with an F1 score of 0.92,precision of 0.93,recall of 0.91,ReceiverOperating Characteristic–AreaUnder the Curve(ROC-AUC)of 0.97,andminority recall of 0.75.Interpretability testing using permutation importance and Shapley values indicates that sensors 13,15,and 11 are the most important indicators of engine wear.The proposed system combines imbalance handling,feature reduction,and Interpretability into a practical design suitable for real industrial settings.
基金supported by National Natural Science Foundation of China(62106092)Natural Science Foundation of Fujian Province(2024J01822,2024J01820,2022J01916)Natural Science Foundation of Zhangzhou City(ZZ2024J28).
文摘Feature selection serves as a critical preprocessing step inmachine learning,focusing on identifying and preserving the most relevant features to improve the efficiency and performance of classification algorithms.Particle Swarm Optimization has demonstrated significant potential in addressing feature selection challenges.However,there are inherent limitations in Particle Swarm Optimization,such as the delicate balance between exploration and exploitation,susceptibility to local optima,and suboptimal convergence rates,hinder its performance.To tackle these issues,this study introduces a novel Leveraged Opposition-Based Learning method within Fitness Landscape Particle Swarm Optimization,tailored for wrapper-based feature selection.The proposed approach integrates:(1)a fitness-landscape adaptive strategy to dynamically balance exploration and exploitation,(2)the lever principle within Opposition-Based Learning to improve search efficiency,and(3)a Local Selection and Re-optimization mechanism combined with random perturbation to expedite convergence and enhance the quality of the optimal feature subset.The effectiveness of is rigorously evaluated on 24 benchmark datasets and compared against 13 advancedmetaheuristic algorithms.Experimental results demonstrate that the proposed method outperforms the compared algorithms in classification accuracy on over half of the datasets,whilst also significantly reducing the number of selected features.These findings demonstrate its effectiveness and robustness in feature selection tasks.
基金supported by the Major Science and Technology Programs in Henan Province(No.241100210100)Henan Provincial Science and Technology Research Project(No.252102211085,No.252102211105)+3 种基金Endogenous Security Cloud Network Convergence R&D Center(No.602431011PQ1)The Special Project for Research and Development in Key Areas of Guangdong Province(No.2021ZDZX1098)The Stabilization Support Program of Science,Technology and Innovation Commission of Shenzhen Municipality(No.20231128083944001)The Key scientific research projects of Henan higher education institutions(No.24A520042).
文摘Existing feature selection methods for intrusion detection systems in the Industrial Internet of Things often suffer from local optimality and high computational complexity.These challenges hinder traditional IDS from effectively extracting features while maintaining detection accuracy.This paper proposes an industrial Internet ofThings intrusion detection feature selection algorithm based on an improved whale optimization algorithm(GSLDWOA).The aim is to address the problems that feature selection algorithms under high-dimensional data are prone to,such as local optimality,long detection time,and reduced accuracy.First,the initial population’s diversity is increased using the Gaussian Mutation mechanism.Then,Non-linear Shrinking Factor balances global exploration and local development,avoiding premature convergence.Lastly,Variable-step Levy Flight operator and Dynamic Differential Evolution strategy are introduced to improve the algorithm’s search efficiency and convergence accuracy in highdimensional feature space.Experiments on the NSL-KDD and WUSTL-IIoT-2021 datasets demonstrate that the feature subset selected by GSLDWOA significantly improves detection performance.Compared to the traditional WOA algorithm,the detection rate and F1-score increased by 3.68%and 4.12%.On the WUSTL-IIoT-2021 dataset,accuracy,recall,and F1-score all exceed 99.9%.
文摘Unconfined Compressive Strength(UCS)is a key parameter for the assessment of the stability and performance of stabilized soils,yet traditional laboratory testing is both time and resource intensive.In this study,an interpretable machine learning approach to UCS prediction is presented,pairing five models(Random Forest(RF),Gradient Boosting(GB),Extreme Gradient Boosting(XGB),CatBoost,and K-Nearest Neighbors(KNN))with SHapley Additive exPlanations(SHAP)for enhanced interpretability and to guide feature removal.A complete dataset of 12 geotechnical and chemical parameters,i.e.,Atterberg limits,compaction properties,stabilizer chemistry,dosage,curing time,was used to train and test the models.R2,RMSE,MSE,and MAE were used to assess performance.Initial results with all 12 features indicated that boosting-based models(GB,XGB,CatBoost)exhibited the highest predictive accuracy(R^(2)=0.93)with satisfactory generalization on test data,followed by RF and KNN.SHAP analysis consistently picked CaO content,curing time,stabilizer dosage,and compaction parameters as the most important features,aligning with established soil stabilization mechanisms.Models were then re-trained on the top 8 and top 5 SHAP-ranked features.Interestingly,GB,XGB,and CatBoost maintained comparable accuracy with reduced input sets,while RF was moderately sensitive and KNN was somewhat better owing to reduced dimensionality.The findings confirm that feature reduction through SHAP enables cost-effective UCS prediction through the reduction of laboratory test requirements without significant accuracy loss.The suggested hybrid approach offers an explainable,interpretable,and cost-effective tool for geotechnical engineering practice.
基金funded by Deanship of Graduate studies and Scientific Research at Jouf University under grant No.(DGSSR-2024-02-01264).
文摘Automated essay scoring(AES)systems have gained significant importance in educational settings,offering a scalable,efficient,and objective method for evaluating student essays.However,developing AES systems for Arabic poses distinct challenges due to the language’s complex morphology,diglossia,and the scarcity of annotated datasets.This paper presents a hybrid approach to Arabic AES by combining text-based,vector-based,and embeddingbased similarity measures to improve essay scoring accuracy while minimizing the training data required.Using a large Arabic essay dataset categorized into thematic groups,the study conducted four experiments to evaluate the impact of feature selection,data size,and model performance.Experiment 1 established a baseline using a non-machine learning approach,selecting top-N correlated features to predict essay scores.The subsequent experiments employed 5-fold cross-validation.Experiment 2 showed that combining embedding-based,text-based,and vector-based features in a Random Forest(RF)model achieved an R2 of 88.92%and an accuracy of 83.3%within a 0.5-point tolerance.Experiment 3 further refined the feature selection process,demonstrating that 19 correlated features yielded optimal results,improving R2 to 88.95%.In Experiment 4,an optimal data efficiency training approach was introduced,where training data portions increased from 5%to 50%.The study found that using just 10%of the data achieved near-peak performance,with an R2 of 85.49%,emphasizing an effective trade-off between performance and computational costs.These findings highlight the potential of the hybrid approach for developing scalable Arabic AES systems,especially in low-resource environments,addressing linguistic challenges while ensuring efficient data usage.
基金funded by the Huaiyin Institute of Technology—Institute of Smart Energy.
文摘In the quest to enhance energy efficiency and reduce environmental impact in the transportation sector,the recovery of waste heat from diesel engines has become a critical area of focus.This study provided an exhaustive thermodynamic analysis optimizing Organic Rankine Cycle(ORC)systems forwaste heat recovery fromdiesel engines.Thestudy assessed the performance of five candidateworking fluids—R11,R123,R113,R245fa,and R141b—under a range of operating conditions,specifically varying overheat temperatures and evaporation pressures.The results indicated that the choice of working fluid substantially influences the system’s exergetic efficiency,net output power,and thermal efficiency.R245fa showed an outstanding net output power of 30.39 kW at high overheat conditions,outperforming R11,which is significant for high-temperature waste heat recovery.At lower temperatures,R11 and R113 demonstrated higher exergetic efficiencies,with R11 reaching a peak exergetic efficiency of 7.4%at an evaporation pressure of 10 bar and an overheat of 10℃.The study also revealed that controlling the overheat and optimizing the evaporation pressure are crucial for enhancing the net output power of the ORC system.Specifically,at an evaporation pressure of 30 bar and an overheat of 0℃,R113 exhibited the lowest exergetic destruction of 544.5 kJ/kg,making it a suitable choice for minimizing irreversible losses.These findings are instrumental for understanding the performance of ORC systems in waste heat recovery applications and offer valuable insights for the design and operation of more efficient and environmentally friendly diesel engine systems.
文摘Multi-label feature selection(MFS)is a crucial dimensionality reduction technique aimed at identifying informative features associated with multiple labels.However,traditional centralized methods face significant challenges in privacy-sensitive and distributed settings,often neglecting label dependencies and suffering from low computational efficiency.To address these issues,we introduce a novel framework,Fed-MFSDHBCPSO—federated MFS via dual-layer hybrid breeding cooperative particle swarm optimization algorithm with manifold and sparsity regularization(DHBCPSO-MSR).Leveraging the federated learning paradigm,Fed-MFSDHBCPSO allows clients to perform local feature selection(FS)using DHBCPSO-MSR.Locally selected feature subsets are encrypted with differential privacy(DP)and transmitted to a central server,where they are securely aggregated and refined through secure multi-party computation(SMPC)until global convergence is achieved.Within each client,DHBCPSO-MSR employs a dual-layer FS strategy.The inner layer constructs sample and label similarity graphs,generates Laplacian matrices to capture the manifold structure between samples and labels,and applies L2,1-norm regularization to sparsify the feature subset,yielding an optimized feature weight matrix.The outer layer uses a hybrid breeding cooperative particle swarm optimization algorithm to further refine the feature weight matrix and identify the optimal feature subset.The updated weight matrix is then fed back to the inner layer for further optimization.Comprehensive experiments on multiple real-world multi-label datasets demonstrate that Fed-MFSDHBCPSO consistently outperforms both centralized and federated baseline methods across several key evaluation metrics.
基金supported by the Jilin Science and Technology Development Program,China (20240602032RC)the Jilin Agricultural Science and Technology Innovation Project,China (CXGC2024ZD001)+1 种基金the Jilin Agricultural Science and Technology Innovation Project,China (CXGC2024ZY012)the Jilin Province Development and Reform Commission-Project for Improving the Independent Innovation Capacity of Major Grain Crops,China (2024C002)。
文摘Emerging and powerful genome editing tools,particularly CRISPR/Cas9,are facilitating functional genomics research and accelerating crop improvement(Jiang et al.2021;Cao et al.2023;Chen C et al.2023;Liu et al.2023a).However,the detection and screening of transgenic lines remain major bottlenecks,being time-consuming,labor-intensive,and inefficient during transformation and subsequent mutation identification.A simple and efficient visual marker system plays a critical role in addressing these challenges.Recent studies demonstrated that the GmW1 and RUBY reporter systems were used to obtain visual transgenic soybean(Glycine max) plants(Chen L et al.2023;Chen et al.2024).
基金supported by the Ministry of Science and Technology(Grant No. 2011 CB 100205)the Ministry of Agriculture of China (Grant Nos.2011ZX08001-004 and 2011ZX08009-002)the National Natural Science Foundation of China(Grant No. 31121063)
文摘1000-Grain weight and spikelet number per panicle are two important components for rice grain yield. In our previous study, eight quantitative trait loci （QTLs） conferring spikelet number per panicle and 1000-grain weight were mapped through sequencing-based genotyping of 150 rice recombinant inbred lines （RILs）. In this study, we validated the effects of four QTLs from Nipponbare using chromosome segment substitution lines （CSSLs）, and pyramided eight grain yield related QTLs. The new lines containing the eight QTLs with positive effects showed increased panicle and spikelet size as compared with the parent variety 93-11. We further proposed a novel pyramid breeding scheme based on marker-assistant and phenotype selection （MAPS）. This scheme allowed pyramiding of as many as 24 QTLs at a single hybridization without massive cross work. This study provided insights into the molecular basis of rice grain yield for direct wealth for high-yielding rice breeding.
基金Supported by Key Projects in the National Science&Technology Pil-lar Program during the Eleventh Five-Year Plan Period(2006BAD01A1703-1)~~
文摘[Objective] The aim was to study the supporting raising technology of Castanea mollissima Blume molecular marker-assisted selection to reduce the cost and time for chestnut breeding.[Method] To find the best cutting method,10 treatments were designed according to transverse diameter and vertical diameter of the chestnut including different cutting ratios in 1/2,1/3,1/4 and different directions about cross cutting,vertical cutting,bevel cutting and two side-cutting.The germination rate,seedling survival rate and morphological indicators of the treatments were measured;significant difference among them was also analyzed.[Result] 1/3 bevel cutting was the best,which not only could give high germination rate and survival rate,but also could guarantee high quality of nursery stock,which did not grow so differently with the untreated seedlings.[Conclusion] This way can not only reduce too much cost and time for seedling breeding,but also promote the germination of chestnut in advance,which could do much good to production.
基金supported by the grants from Hi-Tech Research and Development Program of China("863"Program,No.2003AA222131,2003AA207020)the National Natural Science Foundation of China(No.30170570)Special Program for gene-transfering(No.JY03-B-07,JY03-A-07-02)
文摘Rice with low glutelin content is suitable as functional food for patients affected with diabetes and kidney failure. The fine mapping of the gene(s) responsible for low glutelin content will provide information regarding the distribution of glutelin related genes in rice genome and will generate markers for the selection of low glutelin rice varieties. Following an SDS-PAGE screen of rice germplasm from Taihu Valley of China, Japonica selection W3660 is identified to be a novel mutant characterized with low glutelin content. For fine mapping the mutant gene for low glutelin content, F2 and F3 populations were derived from a cross between W3660 and Jingrennuo. SDS-PAGE analysis of the total endosperm protein showed that the low glutelin content trait was controlled by a single dominant nuclear gene. Genetic mapping, using SSRs, located this gene to chromosome 2, in the region between SSR2-001/SSR2-004 and RM1358. The dis- tances of the two markers to the target gene were 1.1 cM and 3.8 cM respectively. By semi-quantitative RT-PCR analysis, the transcripts of GluB4/GluB5 genes located within the region do not change. However, GluB5 gene located proximal to SSR2-001/SSR2-004 was specifically reduced. SSR profiles of seven Japonica varieties were compared with that of W3660 for loci in the relevant genetic region. The markers SSR2-004 and RM1358 were used for marker- assisted selection. The selection efficiencies of SSR2-004 and RM1358 were 96.8% and 92.7% respectively. This provides a standard starting point for the breeding of low glutelin content rice varieties in China.
基金supported by the National High Technology Research and Development Program of China (2006AA10Z1A6)the Program for New Century Excellent Talents in University, China (NCET-08-0531)
文摘The resistance in tomato plants to bacterial speck caused by Pseudomonas syringae pv. tomato is triggered by the interactions between the plant resistance protein Pto and the pathogen avirulence proteins AvrPto or AvrPtoB. Fen is a gene encoding closely related functional protein kinases as the Pto gene. To investigate the status of resistance to the pathogen and natural variation of Pto and Fen genes in tomato, 67 lines including 29 growing in China were subject to disease resistance evaluation and fenthion-sensitivity test. Alleles of Pto and Fen were amplified from genomic DNA of 25 tomato lines using polymerase chain reaction （PCR） and sequences were determined by sequencing the PCR products. The results indicated that none of the 29 cultivars/hybrids growing in China were resistant to bacterial speck race 0 strain DC3000. Seven of eight tomato lines resistant to DC3000 were also fenthion-sensitive. Analysis of deduced amino acid sequences identified three novel residue substitutions between Pto and pto, and one new substitution identified between Fen and fen. A PCR-based marker was developed and successfully used to select plants with resistance to DC3000.
基金supported by the Key Program of the Development of Variety of Genetically Modified Organisms(Grant Nos.2009ZX08001-019B and 2008ZX08001-006)the Special Program for Rice Scientific Research of Ministry of Agriculture(Grant No.nyhyzx 07-001-006)+1 种基金the Key Support Program of Science and Technology of Jiangsu Province(Grant No.BE2008354)the Self-directed Innovation Fund of Agricultural Science and Technology in Jiangsu Province,China(Grant No.CX[09]634)
文摘A high-yielding japonica rice variety, Wuyunjing 7, bred in Jiangsu Province, China as a female parent was crossed with a Japanese rice variety Kantou 194, which carries a rice stripe disease resistance gene Stv-b＇ and a translucent endosperm mutant gene Wx-mq. From F2 generations, a sequence characterized amplified region （SCAR） marker tightly linked with Stv-b＇ and a cleaved amplified polymorphic sequence （CAPS） marker for Wx-mq were used for marker-assisted selection. Finally, a new japonica rice line, Ning 9108, with excellent agronomic traits was obtained by multi-generational selection on stripe disease resistance and endosperm appearance. The utilization of the markers from genes related to rice quality and disease resistance was helpful not only for establishing a marker-assisted selection system of high-quality and disease resistance for rice but also for providing important intermediate materials and rapid selection method for good quality, disease resistance and high yield in rice breeding.
基金supported by the National Natural Science Foundation of China(31901544 and 2071999)the National Key Research and Development Program of China(2017YFD0100801)。
文摘Fusarium head blight(FHB)is one of the most detrimental wheat diseases which greatly decreases the yield and grain quality,especially in the middle and lower reaches of the Yangtze River of China.Fhb1 and Fhb2 are two major resistance loci against Fusarium graminearum.Yangmai 15(YM15)is one of the most popular varieties in the middle and lower reaches of the Yangtze River,and it has good weak gluten characters but poor resistance to FHB.Here we used Fhb1 and Fhb2 to improve the FHB resistance of YM15 by a molecular marker-assisted selection(MAS)backcrossing strategy.The selection of agronomic traits was performed for each generation.We successfully selected seven introgressed lines which carry homozygous Fhb1 and Fhb2 with significantly higher FHB resistance than the recurrent parent YM15.Three of the introgressed lines had agronomic and quality characters that were similar to YM15.This study demonstrates that the pyramiding of Fhb1 and Fhb2 could significantly improve the FHB resistance in wheat using the MAS approach.
基金supported by Bolashak International Fellowships,Center for International Programs,Ministry of Education and Science,KazakhstanAP14869777 supported by the Ministry of Education and Science,KazakhstanResearch Projects BR10764991 and BR10765000 supported by the Ministry of Agriculture,Kazakhstan。
文摘This review updates the present status of the field of molecular markers and marker-assisted selection(MAS),using the example of drought tolerance in barley.The accuracy of selected quantitative trait loci(QTLs),candidate genes and suggested markers was assessed in the barley genome cv.Morex.Six common strategies are described for molecular marker development,candidate gene identification and verification,and their possible applications in MAS to improve the grain yield and yield components in barley under drought stress.These strategies are based on the following five principles:(1)Molecular markers are designated as genomic‘tags’,and their‘prediction’is strongly dependent on their distance from a candidate gene on genetic or physical maps;(2)plants react differently under favourable and stressful conditions or depending on their stage of development;(3)each candidate gene must be verified by confirming its expression in the relevant conditions,e.g.,drought;(4)the molecular marker identified must be validated for MAS for tolerance to drought stress and improved grain yield;and(5)the small number of molecular markers realized for MAS in breeding,from among the many studies targeting candidate genes,can be explained by the complex nature of drought stress,and multiple stress-responsive genes in each barley genotype that are expressed differentially depending on many other factors.
