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南极红藻Iridaea cordata和Curdiea racovitzae转录组分析及其极端光环境适应相关基因的挖掘
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作者 刘晨临 王秀良 林学政 《海洋学报》 CAS CSCD 北大核心 2020年第10期110-120,共11页
南极红藻具有重要的生态学功能和开发利用价值。南极极端环境赋予了其独特的生理耐受机制,也是发现新基因和代谢途径的理想材料。我们测序分析了南极产胶红藻Iridaea cordata (Turner) Bory和Curdiea racovitzae Hariot的转录组序列,并... 南极红藻具有重要的生态学功能和开发利用价值。南极极端环境赋予了其独特的生理耐受机制,也是发现新基因和代谢途径的理想材料。我们测序分析了南极产胶红藻Iridaea cordata (Turner) Bory和Curdiea racovitzae Hariot的转录组序列,并与其常温近缘种进行了比较,同时挖掘了其与光限制和强紫外线辐射等光环境适应相关的基因。I. cordata和C. racovitzae的转录组序列分别拼接成了14 055条和12 006条非冗余基因,平均长度分别为1 473 bp和1 448 bp。在I. cordata转录组中发现多条与绿藻基因同源的捕光复合物LHC基因Lhca2、Lhca6和Lhcb,并且在两种南极红藻中都各发现了1条编码结合岩藻黄质和Chl a/c蛋白的Lhcf基因,目前尚未在其他红藻中发现这类基因。光裂解酶修复紫外线诱导DNA损伤,在I. cordata的转录组序列中发现了6-4光裂解酶,光裂解酶CPD Ⅰ和CPD Ⅱ基因,而C. racovitzae转录组序列中仅找到了光裂解酶CPD Ⅱ基因。尽管南极红藻中这些特有基因的功能有待进一步的验证,但是本文为后续研究红藻的南极极端光环境适应机制提供了方向。 展开更多
关键词 南极红藻 转录组 极端光环境适应 iridaea cordata Curdiea racovitzae
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Trace Metals Analysis Along the Fildes Peninsula Coastline Using Two Red Algae, Rhodymenia antarctica and Iridaea cordata, as Monitors
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作者 LIU Yang DU Guoying MAO Yunxiang 《Journal of Ocean University of China》 SCIE CAS CSCD 2018年第6期1487-1491,共5页
Two red algae, Rhodymenia antarctica and Iridaea cordata(Rhodophyta), were employed to investigate the pollution situation along Fildes Peninsula coastline, King George Island. Ten sites from east and west coastlines ... Two red algae, Rhodymenia antarctica and Iridaea cordata(Rhodophyta), were employed to investigate the pollution situation along Fildes Peninsula coastline, King George Island. Ten sites from east and west coastlines were investigated, and the concentrations of Cu, Pb, Zn, Cd, Cr, As and Hg were determined. The metal pollution index(MPI) was used to evaluate the overall pollution level represented by the investigated sites and for interregional comparisons. The two algae exhibited different preference to special trace metal. R. antarctica could accumulate more Cd(0.63 mg kg^(-1)) and Hg(0.026 mg kg^(-1)) than I. cordata(Cd 0.34 mgkg^(-1), Hg 0.019 mg kg^(-1)). I. cordata could accumulate more As(15.53 mg kg^(-1)) than R. antarctica(10.11 mg kg^(-1)). There was no significant difference in accumulating Cu, Pb, Zn and Cr between the two algae. R. antarctica could be used to monitor Cd and Hg. I. cordata would be more appropriate for monitoring As. MPI monitored by the two algae were from 1.02 to 2.26(R. antarctica), and 1.03 to 1.25(I. cordata), respectively. Pollution situation of Fildes Peninsula was becoming serious, especially of the east coastline. The objective of this research was to gather the baseline information for trace metals investigation in Antarctic. 展开更多
关键词 Fildes PENINSULA Rhodymenia ANTARCTICA iridaea cordata TRACE metal MPI
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