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Proteomic signatures of infiltrative gastric cancer by proteomic and bioinformatic analysis 被引量:3
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作者 Li-Hua Zhang Hui-Qin Zhuo +3 位作者 Jing-Jing Hou Yang Zhou Jia Cheng Jian-Chun Cai 《World Journal of Gastrointestinal Oncology》 SCIE 2022年第11期2097-2107,共11页
BACKGROUND Proteomic signatures of Ming's infiltrative gastric cancer(IGC)remain unknown.AIM To elucidate the molecular characteristics of IGC at the proteomics level.METHODS Twelve pairs of IGC and adjacent norma... BACKGROUND Proteomic signatures of Ming's infiltrative gastric cancer(IGC)remain unknown.AIM To elucidate the molecular characteristics of IGC at the proteomics level.METHODS Twelve pairs of IGC and adjacent normal tissues were collected and their proteomes were analyzed by high performance liquid chromatography tandem mass spectrometry.The identified peptides were sequenced de novo and matched against the SwissProt database using Maxquant software.The differentially expressed proteins(DEPs)were screened using|log2(Fold change)|>1 and P-adj<0.01 as the thresholds.The expression levels of selected proteins were verified by Western blotting.The interaction network of the DEPs was constructed with the STRING database and visualized using Cytoscape with cytoHubba software.The DEPs were functionally annotated using clusterProfiler,STRING and DAVID for Gene Ontology(GO)and Kyoto Encyclopedia of Genes and Genomes(KEGG)pathways.P<0.05 was considered statistically significant.RESULTS A total of 7361 DEPs were identified,of which 94 were significantly up-regulated and 223 were significantly down-regulated in IGC relative to normal gastric tissues.The top 10 up-regulated proteins were MRTO4,BOP1,PES1,WDR12,BRIX1,NOP2,POLR1C,NOC2L,MYBBP1A and TSR1,and the top 10 down-regulated proteins were NDUFS8,NDUFS6,NDUFA8,NDUFA5,NDUFC2,NDUFB8,NDUFB5,NDUFB9,UQCRC2 and UQCRC1.The up-regulated proteins were enriched for 9 biological processes including DNA replication,ribosome biogenesis and initiation of DNA replication,and the cellular component MCM complex.Among the down-regulated proteins,17 biological processes were enriched,including glucose metabolism,pyruvic acid metabolism and fatty acidβ-oxidation.In addition,the mitochondrial inner membrane,mitochondrial matrix and mitochondrial proton transport ATP synthase complex were among the 6 enriched cellular components,and 11 molecular functions including reduced nicotinamide adenine dinucleotide dehydrogenase activity,acyl-CoA dehydrogenase activity and nicotinamide adenine dinucleotide binding were also enriched.The significant KEGG pathways for the up-regulated proteins were DNA replication,cell cycle and mismatch repair,whereas 18 pathways including oxidative phosphorylation,fatty acid degradation and phenylalanine metabolism were significantly enriched among the down-regulated proteins.CONCLUSION The proteins involved in cell cycle regulation,DNA replication and mismatch repair,and metabolism were significantly altered in IGC,and the proteomic profile may enable the discovery of novel biomarkers. 展开更多
关键词 infiltrative gastric cancer PROTEOMICS Molecular biological characteristics Ming's classification Bioinformatic analysis
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ANALYSIS ON INFILTRATIVE CHARACTERISTICS OF DEFORMABLE POROUS MATAL RUBBER MATERIAL AND PARAMATERS IDENTIFICATION 被引量:7
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作者 Jiang Hongyuan Xia Yuhong +1 位作者 Su Daizhong Белоусов А И 《Chinese Journal of Mechanical Engineering》 SCIE EI CAS CSCD 2005年第4期562-565,共4页
The effect of deformation of porous material on infiltrative performance is investigated. Based on Darcy theory and Boit principle, the Reynolds equation and mathematical expression of deformable metal rubber (MR) m... The effect of deformation of porous material on infiltrative performance is investigated. Based on Darcy theory and Boit principle, the Reynolds equation and mathematical expression of deformable metal rubber (MR) material under laminar flow are obtained according to the change of porosity of metal rubber. It is shown that the throttle of MR material is dependent on its porosity and diameter of metal wires. It will be of great value for the application of MR in throttle field. 展开更多
关键词 Metal rubber Porous material infiltrative coefficient Porosity Reynolds equation
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Repeated operations for infiltrative low - grade gliomas without intervening therapy. 被引量:8
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作者 Schmidt MH Berger MS +4 位作者 Lamborn KR Aldape K McDermott MW Prados MD Chang SM 《中国神经肿瘤杂志》 2003年第2期110-110,共1页
OBJECT:Progression of infiltrative low-grade gliomas(LGGs)has been reported previously.The limitations ofsuch studies include diverse histological grading systems,intervening therapy,and the lack of histological confi... OBJECT:Progression of infiltrative low-grade gliomas(LGGs)has been reported previously.The limitations ofsuch studies include diverse histological grading systems,intervening therapy,and the lack of histological confir-mation of malignant tumor progression.The aim of this study was to determine tumor progression in adult patientswith an initial diagnosis of infiltrative LGG who subsequently underwent a repeated operation,but no other inter-vening therapy.The authors examined factors that may be associated with tumor progression. 展开更多
关键词 were with in of Pro Repeated operations for infiltrative low grade gliomas without intervening therapy
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ERBB1 Is Amplified and Overexpressed in High-grade Diffusely Infiltrative Pediatric Brain Stem Glioma 被引量:1
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作者 Gilbertson RJ Hill DA +8 位作者 Hernan R Kocak M Geyer R Olson J Gajjar A Rush L Hamilton RL Finkelstein SD Pollack IF 《中国神经肿瘤杂志》 2003年第3期161-161,共1页
PURPOSE:This study was conducted to investigate the incidence of ERBB1 amplification and overexpression in samples of diffusely infiltrative (WHO grades Ⅱ-Ⅳ) pediatric brain stem glioma (BSG) and determine the relat... PURPOSE:This study was conducted to investigate the incidence of ERBB1 amplification and overexpression in samples of diffusely infiltrative (WHO grades Ⅱ-Ⅳ) pediatric brain stem glioma (BSG) and determine the relationship of these abnormalities to expression and mutation of TP53 and tumor grade. Experimental Design: After central pathology review, the incidence of ERBB1 amplification and overexpression was determined in 28 samples (18 surgical biopsy and 10 postmortem specimens) of BSG using quantitative PCR and immunohistochemistry, 展开更多
关键词 in of BSG ERBB1 Is Amplified and Overexpressed in High-grade Diffusely infiltrative Pediatric Brain Stem Glioma
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Prognostic significance of serum inflammation indices for different tumor infiltrative pattern types of gastric cancer
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作者 Yu-Fei Wang Xin Yin +8 位作者 Tian-Yi Fang Yi-Min Wang Lei Zhang Xing-Hai Zhang Dao-Xu Zhang Yao Zhang Xi-Bo Wang Hao Wang Ying-Wei Xue 《World Journal of Gastrointestinal Oncology》 SCIE 2022年第4期897-919,共23页
BACKGROUND Inflammatory indices are considered to be potential prognostic biomarkers for patients with gastric cancer(GC).However,there is no evidence defining the prognostic significance of inflammatory indices for G... BACKGROUND Inflammatory indices are considered to be potential prognostic biomarkers for patients with gastric cancer(GC).However,there is no evidence defining the prognostic significance of inflammatory indices for GC with different tumor infiltrative pattern(INF)types.AIM To evaluate the significance of inflammatory indices and INF types in predicting the prognosis of patients with GC.METHODS A total of 962 patients who underwent radical gastrectomy were retrospectively selected for this study.Patients were categorized into the expansive growth type(INFa),the intermediate type(INFb),and the infiltrative growth type(INFc)groups.The cutoff values of inflammatory indices were analyzed by receiver operating characteristic curves.The Kaplan–Meier method and log-rank test were used to analyze overall survival(OS).The chi-square test was used to analyze the association between inflammatory indices and clinical characteristics.The independent risk factors for prognosis in each group were analyzed by univariate and multivariate analyses based on logistic regression.Nomogram models were constructed by R studio.RESULTS The INFc group had the worst OS(P<0.001).The systemic immune-inflammation index(P=0.039)and metastatic lymph node ratio(mLNR)(P=0.003)were independent risk factors for prognosis in the INFa group.The platelet-lymphocyte ratio(PLR)(P=0.018),age(P=0.026),body mass index(P=0.003),and postsurgical tumor node metastasis(pTNM)stage(P<0.001)were independent risk factors for prognosis in the INFb group.The PLR(P=0.021),pTNM stage(P=0.028),age(P=0.021),and mLNR(P=0.002)were independent risk factors for prognosis in the INFc group.The area under the curve of the nomogram model for predicting 5-year survival in the INFa group,INFb group,and INFc group was 0.787,0.823,and 0.781,respectively.CONCLUSION The outcome of different INF types GC patients could be assessed by nomograms based on different inflammatory indices and clinicopathologic features. 展开更多
关键词 Gastric cancer Tumor infiltrative pattern Systemic immune-inflammation index Plateletlymphocyte ratio Prognosis NOMOGRAM
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Effect of α-interferon + gemcitabine combined with infusion chemotherapy on the proliferation and infiltrative growth of advanced bladder cancer
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作者 Yuan Luo Juan Zhou 《Journal of Hainan Medical University》 2017年第22期123-126,共4页
Objective: To study the effect of α-interferon + gemcitabine combined with infusion chemotherapy on the proliferation and infiltrative growth of advanced bladder cancer. Methods: Patients with advanced bladder cancer... Objective: To study the effect of α-interferon + gemcitabine combined with infusion chemotherapy on the proliferation and infiltrative growth of advanced bladder cancer. Methods: Patients with advanced bladder cancer who accepted bladder infusion chemotherapy in Wuhan Red Cross Hospital between March 2015 and August 2016 were selected and randomly divided into the IFN-α+GEM group and the GEM group who acceptedα-interferon + gemcitabine combined with infusion chemotherapy and single gemcitabine infusion chemotherapy respectively. The contents of bladder cancer markers, cancer cell apoptosis molecules and angiogenesis molecules in urine were detected before treatment and 3 months after treatment. Results: 3 months after treatment, NMP-22, BLCA-4, Apo-A1, HA, CYFRA21-1, ANG, NAC-1, VEGF and bFGF levels in urine of both groups of patients were significantly lower than those before treatment while PTEN, TRAIL, Bim, HSG and p16 levels were significantly higher than those before treatment, and NMP-22, BLCA-4, Apo-A1, HA, CYFRA21-1, ANG, NAC-1, VEGF and bFGF levels in urine of IFN-α+GEM group were significantly lower than those of GEM group while PTEN, TRAIL, Bim, HSG and p16 levels were significantly higher than those of GEM group. Conclusion: α-interferon + gemcitabine combined with infusion chemotherapy can be more effective than single gemcitabine infusion chemotherapy in killing cancer cells and inhibiting the proliferation and infiltrative growth of the cancer cells. 展开更多
关键词 BLADDER cancer Infusion chemotherapy Α-INTERFERON GEMCITABINE Cell PROLIFERATION infiltrative GROWTH
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CVI过程中三向正交预制体孔隙结构的演变及气体扩散行为
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作者 肖佳文 杨敏 +4 位作者 姚彧敏 黄成杰 李红 任慕苏 孙晋良 《上海大学学报(自然科学版)》 北大核心 2025年第1期58-67,共10页
为探究碳纤维预制体孔隙结构对碳/碳材料致密化效率的影响,以织造参数不同的3种三向正交预制体为研究对象,采用相同的化学气相渗透(chemical vapor infiltration,CVI)工艺致密化,并研究气体在纤维束内、纤维束间孔隙中的扩散行为,探究不... 为探究碳纤维预制体孔隙结构对碳/碳材料致密化效率的影响,以织造参数不同的3种三向正交预制体为研究对象,采用相同的化学气相渗透(chemical vapor infiltration,CVI)工艺致密化,并研究气体在纤维束内、纤维束间孔隙中的扩散行为,探究不同类型孔隙对增重速率的影响.借助ImageJ软件计算CVI后3种预制体中纤维束内规则化模型孔隙的演变;借助显微观测法获得预制体参数,定量计算模型孔隙通道面积及气体扩散系数.研究结果表明,气体在纤维束内孔隙中扩散时,前期发生Fick扩散,后期以Knudsen扩散为主,束内孔隙数量主要通过影响前期增重速率来影响孔隙填充;纤维含量低的A3预制体中束间孔隙率高,孔隙截面积大,具有更高的扩散系数,束内单丝按同心圆式排列,在CVI过程中易形成闭孔,气体在纤维束间孔隙处主要发生Fick扩散,扩散系数主要受扩散通道面积和孔隙率影响,并对后期增重速率产生影响. 展开更多
关键词 碳纤维预制体 孔隙结构 化学气相渗透 (chemical vapor INFILTRATION CVI) 致密化 气体扩散
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C/C-Ti_(3)SiC_(2)复合材料的制备及性能研究
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作者 陈旭 王言 +4 位作者 陈翔 吕雉 赵欢 孙国栋 张毅 《航空制造技术》 北大核心 2025年第19期44-50,91,共8页
本文采用反应熔渗法(Reactive melting infiltration,RMI),以TiC粉、Ti粉、Si粉、Al粉为原材料,制备C/C-Ti_(3)SiC_(2)复合材料,研究原料不同摩尔配比对复合材料的相组成、微观形貌、抗弯强度、热物理性能、电磁屏蔽效能的影响。结果表... 本文采用反应熔渗法(Reactive melting infiltration,RMI),以TiC粉、Ti粉、Si粉、Al粉为原材料,制备C/C-Ti_(3)SiC_(2)复合材料,研究原料不同摩尔配比对复合材料的相组成、微观形貌、抗弯强度、热物理性能、电磁屏蔽效能的影响。结果表明,摩尔配比为1.8TiC/1.2Ti/1.4Si/0.2Al制得的复合材料中,Ti_(3)SiC_(2)含量较高,表现出较好的力学性能、导热性能和电磁屏蔽能,抗弯强度从103.02 MPa±8 MPa提高到150.50 MPa±7 MPa,热导率在室温至1000℃下为12.651~15.193 W/(m·K),电磁屏蔽效能在8.2~12.4 GHz频率范围内从21.40 dB提高到26.68 dB。通过对3组试样的相组成及微观形貌的分析发现,随着TiC与Ti摩尔比的降低,Ti_(3)SiC_(2)的生成难度逐渐提高,主要是因为Ti含量在反应过程中对液相的产生及反应的进行程度起到了关键调控作用。 展开更多
关键词 碳/碳复合材料 反应熔渗法(Reactive melting infiltration RMI) 力学性能 导热性能 电磁屏蔽效能
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Predicting Infiltrative Hepatocellular Carcinoma Patient Outcome Post-TACE:MR Bias Field Correction Effect on 3D-quantitative Image Analysis 被引量:1
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作者 Cuihong Liu Susanne Smolka +8 位作者 Xenophon Papademetris Duc Do Minh Geliang Gan Yanhong Deng MingDe Lin Julius Chapiro Ximing Wang Christos Georgiades Kelvin Hong 《Journal of Clinical and Translational Hepatology》 SCIE 2020年第3期292-298,共7页
Background and Aims:To investigate the impact of MR bias field correction on response determination and survival prediction using volumetric tumor enhancement analysis in patients with infiltrative hepatocellular carc... Background and Aims:To investigate the impact of MR bias field correction on response determination and survival prediction using volumetric tumor enhancement analysis in patients with infiltrative hepatocellular carcinoma,after transcatheter arterial chemoembolization(TACE).Methods:This study included 101 patients treated with conventional or drug-eluting beads TACE between the years of 2001 and 2013.Semi-automated 3D quantification software was used to segment and calculate the enhancing tumor volume(ETV)of the liver with and without bias-field correction on multi-phasic contrast-enhanced MRI before and 1-month after initial TACE.ETV(expressed as cm3)at baseline imaging and the relative change in ETV(as%change,ETV%)before and after TACE were used to predict response and survival,respectively.Statistical survival analyses included Kaplan-Meier curve generation and Cox proportional hazards modeling.Q statistics were calculated and used to identify the best cut-off value for ETV to separate responders and non-responders(ETV cm3).The difference in survival was evaluated between responders and non-responders using Kaplan-Meier and Cox models.Results:MR bias field correction correlated with improved response calculation from baseline MR as well as survival after TACE;using a 415 cm3 cut-off for ETV at baseline(hazard ratio:2.00,95%confidence interval:1.23-3.26,p=0.01)resulted in significantly improved response prediction(median survival in patients with baseline ETV<415 cm3:19.66 months vs.≥415 cm3:9.21 months,p<0.001,log-rank test).A≥41%relative decrease in ETV(hazard ratio:0.58,95%confidence interval:0.37-0.93,p=0.02)was significant in predicting survival(ETV≥41%:19.20 months vs.ETV<41%:8.71 months,p=0.008,log-rank test).Without MR bias field correction,response from baseline ETV could be predicted but survival after TACE could not.Conclusions:MR bias field correction improves both response assessment and accuracy of survival prediction using whole liver tumor enhancement analysis from baseline MR after initial TACE in patients with infiltrative hepatocellular carcinoma. 展开更多
关键词 3D volume measurement infiltrative HCC TACE Segmentation Bias field correction
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Pan-cancer transcriptomic analysis reveals HSPB8 as a prognostic and immunological biomarker in colorectal cancer 被引量:1
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作者 Yuyong Deng Xuguang Sun +3 位作者 Rui Jian DuojiaWu Junyang Wang Shan Li 《Oncology and Translational Medicine》 2025年第1期36-45,共10页
Background:Heat shock protein B8(HSPB8)is implicated in autophagy,and its aberrant expression has been linked to both the ini-tiation and progression of tumors.However,the role and function of HSPB8 in colorectal canc... Background:Heat shock protein B8(HSPB8)is implicated in autophagy,and its aberrant expression has been linked to both the ini-tiation and progression of tumors.However,the role and function of HSPB8 in colorectal cancer(CRC)and across multiple cancer types remain unclear.This study aimed to map the transcriptome of autophagy-related genes in CRC and to conduct a pan-cancer analysis of HSPB8 as both a prognostic and immunological biomarker.Methods:We performed bioinformatics analyses on GSE113513 and GSE74602 to identify differentially expressed genes(DEGs)in CRC.These DEGs were then compared with autophagy-related genes to identify critical overlapping genes.The Kaplan-Meier plotter was used to verify the ex-pression of autophagy-linked DEGs and evaluate its prognostic value.The protein expression of Hub gene in CRC was analyzed using the Human Protein Atlas database.The cBioPortal was used to analyze the type and frequency of Hub gene mutations.The TIMER(Tumor Immune Estimation Resource)database was used to study the correlation between HSPB8 and immune infiltration in CRC.Results:In total,825 DEGs were identified,including 8 autophagy-linked DEGs:ATIC,MYC,HSPB8,TNFSF10,BCL2,TP53INP2,ITPR1,and NKX2-3.Survival analysis showed that increased HSPB8 expression significantly correlates with poor prognosis in patients with CRC(p<0.05).HSPB8 was also found to be differentially expressed in various cancer types,correlating with both prognosis and immune infiltration.Further,changes in HSPB8 methylation and phosphorylation status were observed across several cancers,suggesting potential regulatory mechanisms.Therefore,HSPB8 may serve as a crucial prognostic and immunological biomarker in CRC and other cancers.Conclusions:This study provides new insights into the role of autophagy-related genes in cancer progression and highlights HSPB8 as a potential target for cancer diagnostics and therapy. 展开更多
关键词 BIOMARKER Differentially expressed gene HSPB8 Immune infiltration Pan-cancer
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Higher entropy-induced strengthening in mechanical property of Cantor alloys/Zr-3 joints by laser in-situ eutectic high-entropy transformation 被引量:1
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作者 Nan Jiang Hong Bian +7 位作者 Xiaoguo Song Hyeonseok Kwon Xin Xi Danyang Lin Bo Chen Weimin Long Hyoung Seop Kim Lianhui Jia 《Journal of Materials Science & Technology》 2025年第8期110-122,共13页
To effectively regulate the grain boundary infiltration in CoCrFeMnNi high-entropy alloy(Cantor alloys,HEA)caused by the violent atomic interdiffusion,the higher configuration entropy on Cantor alloys surface was desi... To effectively regulate the grain boundary infiltration in CoCrFeMnNi high-entropy alloy(Cantor alloys,HEA)caused by the violent atomic interdiffusion,the higher configuration entropy on Cantor alloys surface was designed and realized via eutectic high-entropy(EHEA)transformation.Meanwhile,to effectively alleviate the residual stress caused by the notable difference in the thermal expansion coefficient(CTE)between Cantor alloys and Zr-3 alloys,a cladding layer was applied to the HEA surface using laser cladding technology of Nb,followed by brazing to Zr-3 alloys with Zr63.2Cu filler.The cladding layer’s microstructure comprised Nbss and FCC+(Co,Ni)_(2) Nb eutectic structure,resulting from an in-situ reaction between Cantor alloys and Nb.The Nbss and FCC demonstrated good plasticity,and the(Co,Ni)_(2) Nb Laves phase provided increased strength,endowing both good plastic deformation ability and strength of the cladding layer.Notably,the existence of EHEA in the laser cladding layer made the Cantor alloy entropy from 1.61 R to 1.77 R,greatly enhancing its thermal stability and suppressing the grave grain boundary infiltration.Joints produced via laser cladding with Nb-assisted brazing exhibited a complex microstructure(HEA/Nbss+FCC+(Co,Ni)_(2)Nb/(Zr,Nb)(Cr,Mn)_(2)+(Zr,Nb)ss/(Zr,Nb)_(2)(Cu,Ni,Co,Fe)+(Zr,Nb)(Cr,Mn)_(2)+(Zr,Nb)ss/Zr-3) and a significantly improved shear strength of 242.8 MPa at 1010℃ for 10 min,42.4%higher than that of directly brazed joints.This improvement was attributed to reduced grain boundary infiltration,alleviated residual stress due to CTE disparity,and eliminated micro-cracks in the brazing seam.This study presents an effective solution for reducing residual stresses and achieving reliable bonding between Cantor alloys and Zr-3 alloys,with potential applications in brazing CoCrFeNi-based HEA and Zr-3 due to the beneficial eutectic reaction between CoCrFeNi and Nb. 展开更多
关键词 Laser in-situ preparation High-Entropy Grain boundary infiltration Brazing Residual stress Strengthening mechanism
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Overexpression and clinicopathological significance of zinc finger protein 71 in hepatocellular carcinoma 被引量:1
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作者 Kai Qin Dan-Dan Xiong +13 位作者 Zhen Qin Ming-Jie Li Qi Li Zhi-Guang Huang Yu-Xing Tang Jian-Di Li Yan-Ting Zhan Rong-Quan He Jie Luo Hai-Quan Wang Shu-Qi Zhang Gang Chen Dan-Ming Wei Yi-Wu Dang 《World Journal of Hepatology》 2025年第2期182-199,共18页
BACKGROUND Hepatocellular carcinoma(HCC)is one of the most prevalent and aggressive forms of liver cancer,with high morbidity and poor prognosis due to late diagnosis and limited treatment options.Despite advances in ... BACKGROUND Hepatocellular carcinoma(HCC)is one of the most prevalent and aggressive forms of liver cancer,with high morbidity and poor prognosis due to late diagnosis and limited treatment options.Despite advances in understanding its molecular mechanisms,effective biomarkers for early detection and targeted therapy remain scarce.Zinc finger protein 71(ZNF71),a zinc-finger protein,has been implicated in various cancers,yet its role in HCC remains largely unexplored.This gap in knowledge underscores the need for further investigation into the ZNF71 of potential as a diagnostic or therapeutic target in HCC.AIM To explore the expression levels,clinical relevance,and molecular mechanisms of ZNF71 in the progression of HCC.METHODS The study evaluated ZNF71 expression in 235 HCC specimens and 13 noncancerous liver tissue samples using immunohistochemistry.High-throughput datasets were employed to assess the differential expression of ZNF71 in HCC and its association with clinical and pathological features.The impact of ZNF71 on HCC cell line growth was examined through clustered regularly interspaced short palindromic repeat knockout screens.Co-expressed genes were identified and analyzed for enrichment using LinkedOmics and Sangerbox 3.0,focusing on significant correlations(P<0.01,correlation coefficient≥0.3).Furthermore,the relationship between ZNF71 expression and immune cell infiltration was quantified using TIMER2.0.RESULTS ZNF71 showed higher expression in HCC tissues vs non-tumorous tissues,with a significant statistical difference(P<0.05).Data from the UALCAN platform indicated increased ZNF71 levels across early to mid-stage HCC,correlating with disease severity(P<0.05).High-throughput analysis presented a standardized mean difference in ZNF71 expression of 0.55(95%confidence interval[CI]:0.34-0.75).The efficiency of ZNF71 mRNA was evaluated,yielding an area under the curve of 0.78(95%CI:0.75-0.82),a sensitivity of 0.63(95%CI:0.53-0.72),and a specificity of 0.82(95%CI:0.73-0.89).Diagnostic likelihood ratios were positive at 3.61(95%CI:2.41-5.41)and negative at 0.45(95%CI:0.36-0.56).LinkedOmics analysis identified strong positive correlations of ZNF71 with genes such as ZNF470,ZNF256,and ZNF285.Pathway enrichment analyses highlighted associations with herpes simplex virus type 1 infection,the cell cycle,and DNA replication.Negative correlations involved metabolic pathways,peroxisomes,and fatty acid degradation.TIMER2.0 analysis demonstrated positive correlations of high ZNF71 expression with various immune cell types,including CD4^(+)T cells,B cells,regulatory T cells,monocytes,macrophages,and myeloid dendritic cells.CONCLUSION ZNF71 is significantly upregulated in HCC,correlating with the disease’s clinical and pathological stages.It appears to promote HCC progression through mechanisms involving the cell cycle and metabolism and is associated with immune cell infiltration.These findings suggest that ZNF71 could be a novel target for diagnosing and treating HCC. 展开更多
关键词 Hepatocellular carcinoma Zinc finger protein 71 IMMUNOHISTOCHEMISTRY Enrichment analysis Immune infiltration
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Integrative human pan-cancer analysis of NDC80
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作者 Zhengchun Liu Jianing Wang +5 位作者 Peizhen Geng Yuan Yuan Tianwei Zhang Shuai Wang Yang Wang Yihui Liu 《Oncology and Translational Medicine》 2025年第4期175-186,共12页
Background:NDC80 is pivotal in cell division,particularly in regulating the G2/M transition and mitotic progression.Recent studies have demonstrated that NDC80 is significantly overexpressed in multiple solid tumors.F... Background:NDC80 is pivotal in cell division,particularly in regulating the G2/M transition and mitotic progression.Recent studies have demonstrated that NDC80 is significantly overexpressed in multiple solid tumors.Further analysis has suggested that its high expression is significantly associated with an elevated pathological grade,increased metastatic risk,and shortened overall survival in patients with cancer.However,its precise role in pan-cancer development,progression,and prognosis remains unclear.Methods:We conducted a multi-omics analysis of NDC80 using genomic,transcriptomic,and proteomic data from 33 cancer types in The Cancer Genome Atlas,Clinical Proteomic Tumor Analysis Consortium,Genotype-Tissue Expression,and Human Protein Atlas.Results:The results demonstrated frequent NDC80 mutations across multiple malignancies and significantly elevated expression in tumor tissues compared with that in their normal counterparts,correlating with worse overall and disease-free survival.Moreover,NDC80 expression was strongly associated with oncogenic pathways,key protein regulators,cellular components,myeloid-derived suppressor cell infiltration,ESTIMATE scores,and cancer-related signaling networks.Conclusions:These findings underscore the potential of NDC80 as a prognostic biomarker and therapeutic target for cancer treatment. 展开更多
关键词 NDC80 Pan-cancer Tumor Immune infiltration PROGNOSIS Enrichment analysis
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Identification of pyroptosis-related lncRNAs for constructing a prognostic model and their correlation with immune infiltration in pancreatic cancer
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作者 Zhou Ye Qi-Jun Zhang +4 位作者 Wei Chen Xiao-Yu Weng Bing-Yi Lin Beng Yang Wei-Lin Wang 《Hepatobiliary & Pancreatic Diseases International》 2025年第5期579-585,共7页
To the Editor:Pancreatic cancer is a malignancy characterized by a poor prog-nosis,with a 5-year survival rate of<10%[1].Furthermore,only a minority of patients(<20%)qualify for curative-intent resec-tion,and ev... To the Editor:Pancreatic cancer is a malignancy characterized by a poor prog-nosis,with a 5-year survival rate of<10%[1].Furthermore,only a minority of patients(<20%)qualify for curative-intent resec-tion,and even among those who undergo this procedure,the risk of recurrence within three years remains alarmingly high,reach-ing up to 70%[2].Due to the lack of specific clinical manifes-tations of pancreatic cancer,most cases have metastasized or in-vaded the major vessels around the pancreas at the time of initial diagnosis,resulting in a low surgical resection rate.Even patients who undergo surgical resection often face a poor prognosis[3].In recent years,neoadjuvant chemotherapy using agents such as gemcitabine,5-fluorouracil,albumin-bound paclitaxel,modified fluorouracil/leucovorin plus irinotecan,and oxaliplatin(mFOLFIRI-NOX),targeted therapies addressing molecular subtypes of pan-creatic cancer,and immunotherapies targeting PD-1 and PD-L1 have shown efficacy in improving the overall prognosis of patients with pancreatic cancer,although the impact remains modest[4,5].Therefore,novel therapeutic strategies and prognostic evaluation systems are urgently needed to enhance the survival of patients with pancreatic cancer. 展开更多
关键词 lncRNAs PYROPTOSIS pancreatic cancer immune infiltration PROGNOSIS
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Presenting and evaluating a new empirical relationship for estimating the rate of infiltration in trenches
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作者 Mojtaba Hassanpour Hossein Khozeymehnezhad Abalfazl Akbarpour 《Journal of Groundwater Science and Engineering》 2025年第2期101-115,共15页
Empirical formulas are indispensable tools in water engineering and hydraulic structure design.Derived from meticulous field observations,experiments,and diverse datasets,these formulas help to estimate water leakage ... Empirical formulas are indispensable tools in water engineering and hydraulic structure design.Derived from meticulous field observations,experiments,and diverse datasets,these formulas help to estimate water leakage in structures such as dams,tunnels,canals,and pipelines.By utilizing a few easily measurable parameters,engineers can employ these formulas to generate preliminary leakage rate estimates before proceeding with more detailed analyses.In this study,a physical model was developed,and a series of experiments were conducted,considering variables such as inflow rate,materials constituting the unsaturated medium,and variations in infiltration trench depth and width.As a result,a novel artificial recharge method was introduced,and an empirical equation,Q_(out)=0.0066×D_(50)^(0.64)×L×P^(0.36),was proposed to estimate the infiltration capacity of the trench.This equation incorporates factors such as the wetted perimeter,mean soil particle diameter,trench length,and a coefficient.A comparative analysis between the observed data from nine Iranian earthen canals and the values calculated using the proposed equation revealed an average relative error of 15%between the two datasets.In addition,the Pearson correlation coefficient was determined to be 0.981 and the Root Mean Square Error(RMSE)was 0.381,demonstrating the strong predictive performance of the equation.The parameters considered in the proposed equation allow for its application across diverse regions.Given its accurate performance,this equation provides a reliable initial estimate of the leakage rate,thereby helping to reduce costs and save time. 展开更多
关键词 GROUNDWATER Artificial recharge Desert area Infiltration rate Physical model
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Liver failure due to metastatic melanoma:A case report
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作者 Viktor Domislovic Vibor Sesa +2 位作者 Iva Kosuta Stela Bulimbasic Anna Mrzljak 《World Journal of Clinical Cases》 2025年第31期93-100,共8页
BACKGROUND Acute liver failure(ALF)due to diffuse hepatic infiltration by metastatic mela-noma is extremely rare and often misdiagnosed.In the absence of prior malig-nancy,this presentation can mimic other hepatic eme... BACKGROUND Acute liver failure(ALF)due to diffuse hepatic infiltration by metastatic mela-noma is extremely rare and often misdiagnosed.In the absence of prior malig-nancy,this presentation can mimic other hepatic emergencies such as Budd-Chiari syndrome.Early identification is crucial,especially in transplant candidates,to prevent inappropriate management.CASE SUMMARY A 61-year-old male presented with jaundice,abdominal distension,and enceph-alopathy.Liver imaging suggested acute Budd-Chiari syndrome,and liver trans-plantation was considered.However,biopsy revealed extensive hepatic infilt-ration by human melanoma black-positive melanoma cells.There was no known can-cer history,although retrospective symptoms suggested uveal localization as a possi-ble primary site.The patient rapidly deteriorated and died.A review of 12 simi-lar cases revealed shared diagnostic challenges,frequent misdiagnoses,and poor outcomes.CONCLUSION Infiltrative melanoma should be considered in unexplained ALF,even without previously known malignancy. 展开更多
关键词 Acute liver failure MELANOMA Budd-Chiari syndrome Hepatic infiltration Case report
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ARPC1A Promotes NSCLC Malignancy via Stimulating the Drug Resistance and Cell Migration
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作者 Hongjuan Guo Dan Liu +3 位作者 Ruyu Yan Tianjing Zhang Kecheng Zhou Minxia Liu 《BIOCELL》 2025年第3期483-502,共20页
Objectives:Non-small cell lung cancer(NSCLC)represents a formidable malignancy characterized by its marked metastatic potential and intrinsic resistance to therapeutic interventions.The identification of potential bio... Objectives:Non-small cell lung cancer(NSCLC)represents a formidable malignancy characterized by its marked metastatic potential and intrinsic resistance to therapeutic interventions.The identification of potential biomarkers delineating the progression and metastatic cascade of NSCLC assumes paramount importance in fostering advancements toward enhanced patient outcomes and prognostic stratification.Methods:The expression level of the actin-related protein 2/3 complex;subunit 1A(ARPC1A)in NSCLC was evaluated using The Cancer Genome Atlas(TCGA)and Gene Expression Profiling Interactive Analysis(GEPIA)databases;along with the LinkedOmics database for co-expression genes.Further verification of ARPC1A expression in normal lung cells and NSCLC cells;as well as in normal tissues and lung cancer tissues;was performed using quantitative real-time reverse transcription PCR(RTqPCR)and Western blotting.The function of ARPC1A was explored through Gene Set Enrichment Analysis(GSEA)and immune infiltration analysis;followed by functional experiments for validation.Results:ARPC1A is upregulated in NSCLC and is associated with unfavorable clinical prognoses.Additionally,the Kyoto Encyclopedia of Genes and Genomes(KEGG)pathway enrichment analysis highlights a potential link between the ARPC1A gene and the cell cycle and p53 signaling pathways.ARPC1A also promotes cell proliferation and resistance to chemotherapeutic drugs,thereby enhancing the oncogenic potential of NSCLC.Relevant cell-based experiments confirm that targeted inhibition of ARPC1A effectively suppresses cellular migratory and invasive capabilities.The immune infiltration analysis showed a close association between ARPC1A expression and various immune components,suggesting ARPC1A may interact with the tumor microenvironment.Mechanistically,ARPC1A promotes cell migration by stimulating the epithelialto-mesenchymal transition(EMT).Conclusion:The study results revealed the potential of ARPC1A as a valuable prognostic biomarker for NSCLC.Additionally,the associated mechanisms provide insights that may pave the way for therapeutic interventions for NSCLC patients. 展开更多
关键词 NSCLC ARPC1A drug resistance EMT immune infiltration dynamics
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Adult presentation of Shwachman-Diamond syndrome complicated by liver cirrhosis and pancreatic fat infiltration:A case report
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作者 Hai-Jun Guo 《World Journal of Hepatology》 2025年第6期247-252,共6页
BACKGROUND Shwachman-Diamond syndrome(SDS)is a rare genetic disorder that affects multiple organs,primarily the liver.Most patients are diagnosed during infancy or early childhood.As they grow older,the majority of af... BACKGROUND Shwachman-Diamond syndrome(SDS)is a rare genetic disorder that affects multiple organs,primarily the liver.Most patients are diagnosed during infancy or early childhood.As they grow older,the majority of affected children may experience spontaneous remission,and cases of cirrhosis in adults are rarely reported.CASE SUMMARY A 36-year-old male patient presented with massive ascites.Laboratory tests revealed pancytopenia and a serum-ascites albumin gradient greater than 1.1 g/dL.An abdominal computed tomography scan demonstrated cirrhosis,splenomegaly,pancreatic fat infiltration,and a substantial accumulation of peritoneal fluid.Gastroscopy identified esophageal varices.Liver stiffness measurement indicated a value of 32.7 kPa.Based on the results of auxiliary examinations,common causes of cirrhosis were excluded,and a mutation in the Shwachman-Bodian-Diamond syndrome gene was ultimately identified through whole-exome sequencing.The patient was diagnosed with cirrhosis secondary to SDS.Following the correction of hypoalbuminemia and administration of diuretics,the patient's ascites resolved.CONCLUSION Patients with liver cirrhosis who also exhibit pancreatic fat infiltration and pancytopenia necessitate further exon testing to exclude the possibility of SDS. 展开更多
关键词 Shwachman-Diamond syndrome Cirrhosis Pancreatic fat infiltration ASCITES Esophageal varices Case report
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Effect of alpha-tocopherol and OTR-4131 on muscle degeneration after rotator cuff tear in rats:An experimental protocol
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作者 Stavros Stamiris Angeliki Cheva +7 位作者 Michael Potoupnis Elissavet Anestiadou Dimitrios Stamiris Chryssa Bekiari Antonia Loukousia Papavasiliou Kyriakos Eleftherios Tsiridis Ioannis Sarris 《World Journal of Methodology》 2025年第4期287-298,共12页
BACKGROUND Massive rotator cuff tears(RCTs)result in impaired shoulder function and quality of life.These tears lead to structural changes in the rotator cuff muscles,which compromise recovery after repair and increas... BACKGROUND Massive rotator cuff tears(RCTs)result in impaired shoulder function and quality of life.These tears lead to structural changes in the rotator cuff muscles,which compromise recovery after repair and increase re-tear rates.AIM To investigate the potential inhibitory effects of alpha-tocopherol(vitamin E)and OTR-4131 on muscle atrophy,fatty infiltration,and fibrosis in rotator cuff muscles following a massive RCT using a Wistar rat model,and establish a standardized methodology for evaluating potential therapeutic agents.METHODS This protocol outlines a controlled animal study using 40 male Wistar rats,randomized into five groups.The experimental groups will receive either systemic administration of alpha-tocopherol or local administration of OTR-4131 via intramuscular injection into the supraspinatus and infraspinatus muscles.Two sham groups will receive systemic and local saline injections respectively,while a control group will undergo no intervention.The interventions will be administered after surgical transection of the supraspinatus and infraspinatus tendons.Outcomes will be assessed via wet muscle weight measurements,muscle fiber diameter,fatty infiltration percentage,and fibrosis evaluation using histological methods.RESULTS The study anticipates that alpha-tocopherol and OTR-4131 will reduce muscle atrophy,fatty infiltration,and fibrosis compared to control and sham groups,supporting their potential protective role in rotator cuff muscle degeneration.CONCLUSION The results are expected to improve the understanding on the role of alpha-tocopherol and OTR-4131 in rotator cuff muscle protection after massive RCT and may serve as a foundation for further preclinical and clinical research aimed at improving rotator cuff repair outcomes. 展开更多
关键词 Alpha-tocopherol OTR-4131 Rotator cuff tears Experimental protocol Muscle atrophy Fatty infiltration
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Cuproptosis-related signature and immune infiltration in age-related macular degeneration
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作者 Chen Li Yi-Cheng Lu Ming-Xuan Chen 《International Journal of Ophthalmology(English edition)》 2025年第9期1640-1649,共10页
AIM:To investigate cuproptosis-related molecular and immune infiltration in age-related macular degeneration(AMD)development and establish a predictive model.METHODS:The expression profiles of cuproptosisrelated genes... AIM:To investigate cuproptosis-related molecular and immune infiltration in age-related macular degeneration(AMD)development and establish a predictive model.METHODS:The expression profiles of cuproptosisrelated genes and immune signature in AMD based on the microarray dataset GSE29801 were analyzed.A total of 142 AMD samples were used to identify the cuproptosisrelated differentially expressed genes(Cu-DEGs),together with the immune cell infiltration.To further refine the list of potential genes for AMD diagnosis,three machine learning techniques were used,and an external dataset were applied for confirming the accuracy of the predictive performance.Reverse transcription polymerase chain reaction(RT-PCR)were also performed to examine the level of mRNA of hub genes.The activated immune responses and Cu-DEGs were assessed between AMD and controls.RESULTS:Six genes,including ATP7A,DBT,VEGFA,UBE2D3,CP,SLC31A1,were screened as cuproptosissignature in AMD via three machine learning methods.Next,SLC31A1 and VEGFA was selected as hub genes by performance evaluation in an external dataset GSE160011,further analysis showed that SLC31A1 and VEGFA were associated with pathways related to immune signaling and immune function,which were then observed in relation to infiltrating immune cells.Finally,the mRNA expression levels of SLC31A1 and VEGFA were significantly higher in laser induced choroidal neovascularization(CNV)group than in control group detected by RT-PCR.CONCLUSION:In this study,the possible relationship between cuproptosis and AMD is expounded systematically.A predictive model is developed to assess the risk of cuproptosis-related genes and their clinical prognostic value in AMD patients. 展开更多
关键词 age-related macular degeneration cuproptosis immune infiltration machine learning
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