To assess the indica-japonica differentiation of improved rice varieties, a total of 512 modem varieties including 301 indica and 211 japonica accessions were analyzed using 36 microsatellites. The Fst coefficients ra...To assess the indica-japonica differentiation of improved rice varieties, a total of 512 modem varieties including 301 indica and 211 japonica accessions were analyzed using 36 microsatellites. The Fst coefficients ranged from 0.002 to 0.730 among the loci with an average of 0.315. Significant differentiation was detected at 94.4% of the loci studied （P 〈 0.05, pairwise Fst tests）, indicating that there was a high level of indica-japonica differentiation within the improved varieties. At 18 loci, about 74%-98% of the alleles of indica and japonica accessions were distributed in two ranges of amplicon length. Linkage disequilibrium analysis showed that the distribution trends were significantly nonrandomly associated. Using the differentiation trends at the 18 loci, microsatellite index （MI） was proposed for discrimination of the two subspecies. When rice accessions with MI value greater than zero were classified as indica, and those with MI value smaller than zero were classified as japonica, about 96.1% of the accessions could be classified. This result agrees with the classification based on morphological-physiological characters, indicating that this method is feasible and effective.展开更多
Revealing the indica-japonica differentiation in parents of hybridization between indica and japonica rice and their derived lines can provide theoretical and practical bases for the breeding of practical inter-subspe...Revealing the indica-japonica differentiation in parents of hybridization between indica and japonica rice and their derived lines can provide theoretical and practical bases for the breeding of practical inter-subspecific hybrid rice. Using subspeciesspecific molecular markers ILP （intron length polymorphism） and Cheng＇s index, the indica-japonica differentiation was analyzed with special materials including 18 indica-japonica hybrid parents and 39 derived lines, which accumulated different wide compatibility and restoring genes by convergent cross method in 21 years spanning four breeding phases. The indica-japonica differentiation was detected on all tested loci in 57 materials. Among the 18 parental lines, 4 were japonica type, 5 japonicaclinous type, 8 indicaclinous type and one indica type. The japonica proportion indexes in indica restorer lines Minghui 63 and 9308 were 12.50 and 33.33 %, respectively, while that in japonica restorer line C418 was only 31.25%. Among the 39 derived lines from indica-japonica hybridization, one was japonica type, 11 japonicaclinous type, 20 indicaclinous type and 7 indica type. The japonica proportion index in Minghui 502 was only 10.42%. The results of indica and japonica classification by ILP molecular markers and Cheng＇s index were relatively consistent. The correlation coefficient between the japonica proportion index and morphology index was 0.794＊＊, while that between the indica proportion index and morphology index was -0.7662＊＊. ILP markers could be used to accurately detect the proportion of indica/japonica content in the genome of a rice variety. The results of indica-japonica differentiation analysis could make reasonable explanation for that the hybrids obtained from indica-japonica type restorer lines had obvious heterosis. This conclusion would provide important guidance in efficient use of beneficial genes of inter-subspecific hybrid rice.展开更多
The relationship between the indica-japonica differentiation of parents and heterosis of hybrid in rice was studied with 10 sterile lines, 10 maintainer lines of the sterile lines, 38 restorer lines of Dian type hybri...The relationship between the indica-japonica differentiation of parents and heterosis of hybrid in rice was studied with 10 sterile lines, 10 maintainer lines of the sterile lines, 38 restorer lines of Dian type hybrid rice and 40 hybrids derived from the sterile lines and restorer lines. The results indicated that there was a parabolic correlation between the indica-japonica differentiation of parents detected by RAPD markers and heterosis of hybrid rice. When certain indica-japonica differentiation of parents exists, the percentage of combinations with positve heterosis and the mean heterosis of hybrids were high. But that didn't mean too much difference of parents could lead to stronger hetesosis, that meant overdiffernt parents seldom bring positve het-erotic hybrids. Suitable difference of percent of indica alleles of parents of stronger heterotic hybrid was 12 -16%.展开更多
Spermidine（Spd） is known to be involved in the regulation of plant responses to chilling stress and counteract the adverse effect of stress conditions.Antioxidant activities,endogenous hormones and ultrastructure ch...Spermidine（Spd） is known to be involved in the regulation of plant responses to chilling stress and counteract the adverse effect of stress conditions.Antioxidant activities,endogenous hormones and ultrastructure change under chilling stress were investigated in indica-japonica hybrid rice seedlings.12-d-old seedlings were subjected to exogenous Spd（1 mmol L^（-1）） and then a chilling stress（6℃,4 d） was induced,followed by a subsequent recovery（25℃,4 d）.Results showed that malondialdehyde（MDA） and proline content were enhanced significantly,whereas shoot fresh and dry weights decreased during chilling stress and after recovery;chlorophyll content of chilling-stressed seedlings increased slightly but declined after recovery;additionally,total soluble sugar,sucrose,fructose and starch contents increased significantly during chilling stress,and only soluble sugar and fructose contents were observed in increase after recovery;chilling stress-induced increases in superoxide dismutase（SOD）,peroxidase（POD） and catalase（CAT） activities,but declined after recovery,and the level of ascorbate peroxidase was lower during chilling stress and after recovery;however,endogenous indole-3-acetic acid（IAA）,zeatin riboside（ZR）,gibberellic acid（GA_3）,and abscisic acid（ABA） levels were induced decreased compared with Spd pretreatment.The microscopic analysis revealed that chilling stress-induced destruction of the chloroplast envelope during chilling stress and increased the number of plastoglobuli along with aberrations in thylakoid membranes after recovery.In contrast,exogenous Spd protected rice seedlings from chilling-induced injuries in terms of lower malondialdehyde,proline and carbohydrates accumulation coupled with increased endogenous hormones metabolism.After recovery,Spd pretreatment chilling-exposed seedlings showed higher activities of antioxidant enzymes and normal physiological function of chloroplasts.These results suggest that Spd could promote effectively chilling tolerance which might be largely attributable to the integrity of cell structure and normal metabolism of endogenous hormones in indica-japonica hybrid rice seedlings.展开更多
Taking the main parents （10 male sterile lines and 10 restorer lines） and their 100 combinations of japonica hybrid rice in northern China as materials, the relationships of parental indica-japonica indexes determin...Taking the main parents （10 male sterile lines and 10 restorer lines） and their 100 combinations of japonica hybrid rice in northern China as materials, the relationships of parental indica-japonica indexes determined by the methods of the Cheng’s index as well as simple sequence repeat （SSR） markers with yield and grain quality traits of hybrid rice were studied. For the parents, the Cheng’s index （Chi） ranged from 13.5 to 19.3 and the indica index in SSR markers （ADi） were from 0.12 to 0.38. The classification of parents by Chi was not completely consistent with that by ADi. The Chi of male parent was more closely related to hybrid traits than that of female parent, as contrasted to ADi. At the same time, the difference between parents （PD） in Chi was more closely related to hybrid traits than that in ADi. The indica-japonica indexes of parents and their difference between parents appeared quadratic relationship to hybrid traits with the critical extremum. The directions of the correlation of indica-japonica indexes of parents and their differences with hybrid yield traits were on the opposition to those with hybrid grain quality traits. Therefore, the female parent should match the male parent moderately in indica-japonica index to obtain the optimum of hybrid traits, high yield as well as good quality.展开更多
By using 19 pairs of primers that could identify two subspecies （indica and japonica） of cultivated rice （Oryza sativa L.）, the indica-japonica differentiation of 56 individuals from the natural population of comm...By using 19 pairs of primers that could identify two subspecies （indica and japonica） of cultivated rice （Oryza sativa L.）, the indica-japonica differentiation of 56 individuals from the natural population of common wild rice （Oryza rufipogon Griff.） in Yuanjiang was analyzed by SSR （microsatellite DNAs, or simple sequence repeat）. Of the 19 pairs of primers, 17 pairs （89.47%） could amplify only one kind of band type among all of the individuals, but primers RM251 and RM18 could amplify polymorphic band types. The bands amplified by 16 pairs of primers （84.21%） were identical to the indica-japonica diagnostic bands of relevant locus in cultivated rice, including 11 japonica-like loci and 4 indica-like loci. The bands amplified by the other three pairs of primers （RM18, RM202, RM205） were different from indica or japonica diagnostic bands of cultivated rice. The results showed that according to 19 loci analyzed, 84.21% of SSR loci in genomic DNA of common wild rice in Yuanjiang displayed indica-japonica differentiation and 13.79% of the loci still kept primitive, and most of the detected loci were homoaenetic in the natural population.展开更多
Based on a series of polyploid indica-japonica hybrid plant lines obtained from a new breeding strategy of using double predominance of wide cross and polyploidization to breed super flee, two polyploid indica-japonic...Based on a series of polyploid indica-japonica hybrid plant lines obtained from a new breeding strategy of using double predominance of wide cross and polyploidization to breed super flee, two polyploid indica-japonica hybrids, PSR073 and PSR120 were studied in their growth periods to show the powerful heterosis in a larger scale and to study the characteristics of polyploid indica-japonica hybrids more elaborately. The leaf age, tiller growth, flowering habits, and agronomic traits of them were observed to analyze their growth habits and characteristics. The results showed that the.agronomic traits of PSR073 and PSR120, such as the plant height, panicle length, grain length, grain width, and 1000-grain weight, all acquired obvious predominance of polyploidy, and that the seed setting rate was more than 83%. No significant difference was observed between the two tetraploids and common diploids in the leaf age, tiller growth, and flowering habits. It was concluded that the characteristics of the two powerful heterosis polyploid hybrids were different from those of the polyploid rice reported earlier. Wide cross and polyploidization had no negative effects on their growth habits and characteristics; on the contrary these had powerful heterosis. This had provided theoretic and practical evidences for their application to agricultural production.展开更多
The developmental genetic behaviors of brown rice width （BRW） have been studied in indica-japonica hybrid rice （Oryza sativa L.）, in which seven indica male sterile lines and five japonica restorer lines were appl...The developmental genetic behaviors of brown rice width （BRW） have been studied in indica-japonica hybrid rice （Oryza sativa L.）, in which seven indica male sterile lines and five japonica restorer lines were applied, by using the developmental genetic models and corresponding statistical approaches for quantitative traits of triploid in cereal crops. The BRW of indica-japonica hybrid rice was co-determined by gene expression of tdploid endosperm, cytoplasm, diploid maternal plant and their genotype × environmental interaction effects. Unconditional analysis showed that the endosperm additive and matemal additive effects were predominant for the development of BRW from early- to late-stage of the grain development, but the endosperm dominant effect together with matemal effect and cytoplasmic effect became the major factor determing the BRW at the ripening stage. Moreover, conditional analysis found that there were new onset and offset of gene expression at different developmental stages of BRW in indica-japonica hybrid rice. Maternal and cytoplasm general heritabilities and their interaction heritabilities were more important compared to other components of heritability for BRW at all the five developmental stages.展开更多
Genetic control of leucine content in indica-japonica hybrid rice (Oryza sativa L.) was studied in 35 crosses of F1 and F2 generations, which were derived from crossing 7 male sterile indica rice lines with 5 restorer...Genetic control of leucine content in indica-japonica hybrid rice (Oryza sativa L.) was studied in 35 crosses of F1 and F2 generations, which were derived from crossing 7 male sterile indica rice lines with 5 restorer japonica rice lines along with their parents. Two genetic models and their corresponding statistical methods for quantitative traits of triploid seeds in cereal crops were used for the analysis. The first was the unconditional genetic model, which refers to the analysis of cumulative measurements (from flowering to a specific time) along the developmental stages, while the second was the conditional genetic model, which relates to analysis from one developmental stage to another stage (t - 1→t). The results showed that leucine content of indica-japonica hybrid rice was controlled by the expression of triploid endosperm effect (endosperm additive effect and endosperm dominant effect), cytoplasm effect, diploid maternal plant effect (maternal additive effect and maternal dominant effect) and their environmental interaction effects. Of these effects, endosperm dominant effect and maternal dominant effect were more important at the earlier stages, while endosperm additive effect and maternal additive effect were more important at the later stages of rice grain development under both unconditional and conditional genetic analyses. Due to the high heritabilities, which came from endosperm, maternal and cytoplasm effects for leucine content at different developmental stages, selection for leucine content of indica-japonica hybrid rice would be more efficient at early generations in breeding programs.展开更多
The rice indica/japonica hybrid shows strong heterosis.However,such inter-subspecific hybrid can＇t be directly used in rice production due to its low spikelet fertility.The S5 locus was proved to be associated with f...The rice indica/japonica hybrid shows strong heterosis.However,such inter-subspecific hybrid can＇t be directly used in rice production due to its low spikelet fertility.The S5 locus was proved to be associated with fertility of indica/japonica hybrid and its S5n allele from wide-compatibility variety （WCV） is capable to overcome fertility barrier.In the present study,we reported the causal sites in the S5 locus responsible for compatibility of indica/japonica hybrid.Fine-mapping of the S5 locus using the 11 test-cross families pinpoints a candidate S5 locus encoding aspartic protease （Asp）.Intragenic recombination within the Asp gene happened in a number of recombinants,resulting in chimeric S5j-S5n alleles.Just like S5n,the chimeric S5j-S5n allele displayed higher spikelet fertility when combined with the S5i allele.In the complementary test,however,the S5n allele from WCVs failed to enhance fertilities of the indica/japonica hybrids.Compared to both indica and japonica varieties,all nine WCVs from different resources are characterized with a 136 bp deletion in the Asp N-terminus,which probably renders the S5n allele non-functional.Furthermore,an A/C polymorphic site is detected 1,233 bp downstream of the Asp start codon.The heterozygous A/C site of the Asp gene in indica/japonica hybrid is believed to be the casual factor to cause partial sterility.The functional makers based on the two polymorphic sites will be broadly used in developing wide-compatibility rice varieties.展开更多
大穗型籼粳杂交稻颖花容易退化,为明晰氮素对籼粳杂交稻颖花退化的缓解效应及其调控作用,本研究以大穗型籼粳杂交稻甬优538为试验材料,于2023年和2024年进行试验,设置S_(1)(4月20日播种)、S2(5月10日播种)和S_(3)(5月30日播种)3个播期,1...大穗型籼粳杂交稻颖花容易退化,为明晰氮素对籼粳杂交稻颖花退化的缓解效应及其调控作用,本研究以大穗型籼粳杂交稻甬优538为试验材料,于2023年和2024年进行试验,设置S_(1)(4月20日播种)、S2(5月10日播种)和S_(3)(5月30日播种)3个播期,180 kg hm^(-2)(N12)、270 kg hm^(-2)(N18)2种总施氮量,以及T_(1)(在叶龄余数3.5施用100%穗肥)、T_(2)(在叶龄余数1.5施用100%穗肥)和T_(3)(在叶龄余数3.5施用50%穗肥+叶龄余数1.5施用50%穗肥)3种穗肥施用方式,分析比较不同处理下产量与产量构成、分蘖动态、颖花分化与退化、干物质积累和单朵颖花干物质占比变化。结果表明,(1)S_(1)播期下N18T_(2)处理的产量最高,较S_(3)播期下N12T_(1)处理的产量平均提高46.83%;其中播期对结实率影响最为显著,其次影响每穗粒数;不同施氮量对有效穗数和穗粒数有显著影响,N18处理较N12处理的穗粒数平均提高14.44%,有效穗数平均提高12.88%。(2)不同施氮量和穗肥施用时间对每穗粒数的影响主要在于颖花发育,N18处理较N12处理的氮含量平均提高22.51%,2023年和2024年颖花分化数分别提高12.12%和15.35%,现存颖花数分别提高16.00%和13.60%。穗肥施用时间后移可有效缓解颖花退化,其中N12T_(3)处理平均提高植株氮含量31.58%,N18T_(2)处理平均提高26.29%;T_(2)时期施用保花肥,颖花退化率较T_(1)平均减少18.20%,较T_(3)平均减少5.48%。(3)颖花发育直接依赖于干物质积累,N18处理较N12处理,穗分化始期干物质积累量(DM-SDI)显著提高6.96%,穗发育期间干物质积累量(DM-SD)显著提高15.08%,颖花分化数与DM-SDI、DM-SD呈正相关关系,干物质积累越多,颖花分化数越多。(4)不同穗肥施用时间显著影响穗分化期间单朵颖花的干物质占比(SSDM-SD),T_(2)>T_(3)>T_(1);颖花退化与SSDM-SDI、SSDM-SD呈负相关关系,单朵颖花干物质越小,颖花退化率越高。综上,合理的氮素穗肥通过调控干物质积累来影响籼粳杂交稻颖花形成,叶龄余数1.5时增施穗肥有利于提高单朵颖花的干物质占比,支撑颖花生存和发育,有效缓解颖花退化,增加每穗粒数。在实际生产中,可以适当提早播种,在减少氮肥施用的基础上优化氮肥运筹(施用促花肥和保花肥),可以延长营养生长期并提高单朵颖花干物质占比,促进颖花分化的同时减少颖花退化,进而达到籼粳杂交稻大穗栽培的目标。展开更多
DNA polymorphisms from nucleotide insertion/deletions(InDels)in genomic sequences are the basis for developing InDel molecular markers.To validate the InDel primer pairs on the basis of the comparative genomic study o...DNA polymorphisms from nucleotide insertion/deletions(InDels)in genomic sequences are the basis for developing InDel molecular markers.To validate the InDel primer pairs on the basis of the comparative genomic study on DNA sequences between an Indica rice 93-11 and a Japonica rice Nipponbare for identifying Indica and Japonica rice varieties and studying wild Oryza species,we studied 49 Indica,43 Japonica,and 24 wild rice accessions collected from ten Asian countries using 45 InDel primer pairs.Results indicated that of the 45 InDel primer pairs,41 can accurately identify Indica and Japonica rice varieties with a reliability of over 80%.The scatter plotting data of the principal compo-nent analysis(PCA)indicated that:(i)the InDel primer pairs can easily distinguish Indica from Japonica rice varieties,in addition to revealing their genetic differentiation;(ii)the AA-genome wild rice species showed a relatively close genetic relationship with the Indica rice varieties;and(iii)the non-AA genome wild rice species did not show evident differentiation into the Indica and Japonica types.It is con-cluded from the study that most of the InDel primer pairs obtained from DNA sequences of 93-11 and Nipponbare can be used for identifying Indica and Japonica rice varieties,and for studying genetic relationships of wild rice species,particularly in terms of the Indica-Japonica differentiation.展开更多
基金supported by the National Basic Research Program of China (No.2004CB117201)National Natural Science Foundation of China (No.30600388)the Key Technologies Research and Development Program of China (No.2006BAD13B01)
文摘To assess the indica-japonica differentiation of improved rice varieties, a total of 512 modem varieties including 301 indica and 211 japonica accessions were analyzed using 36 microsatellites. The Fst coefficients ranged from 0.002 to 0.730 among the loci with an average of 0.315. Significant differentiation was detected at 94.4% of the loci studied （P 〈 0.05, pairwise Fst tests）, indicating that there was a high level of indica-japonica differentiation within the improved varieties. At 18 loci, about 74%-98% of the alleles of indica and japonica accessions were distributed in two ranges of amplicon length. Linkage disequilibrium analysis showed that the distribution trends were significantly nonrandomly associated. Using the differentiation trends at the 18 loci, microsatellite index （MI） was proposed for discrimination of the two subspecies. When rice accessions with MI value greater than zero were classified as indica, and those with MI value smaller than zero were classified as japonica, about 96.1% of the accessions could be classified. This result agrees with the classification based on morphological-physiological characters, indicating that this method is feasible and effective.
基金supported by the National Key Technologies R&D Program of China(2006BAD01A01-3)Important Specialized Science and Technology Item of Fujian Province,China (2004NZ01-4)Important Subject Fund of Science and Technology Department of Fujian Province,China(2007N0070)
文摘Revealing the indica-japonica differentiation in parents of hybridization between indica and japonica rice and their derived lines can provide theoretical and practical bases for the breeding of practical inter-subspecific hybrid rice. Using subspeciesspecific molecular markers ILP （intron length polymorphism） and Cheng＇s index, the indica-japonica differentiation was analyzed with special materials including 18 indica-japonica hybrid parents and 39 derived lines, which accumulated different wide compatibility and restoring genes by convergent cross method in 21 years spanning four breeding phases. The indica-japonica differentiation was detected on all tested loci in 57 materials. Among the 18 parental lines, 4 were japonica type, 5 japonicaclinous type, 8 indicaclinous type and one indica type. The japonica proportion indexes in indica restorer lines Minghui 63 and 9308 were 12.50 and 33.33 %, respectively, while that in japonica restorer line C418 was only 31.25%. Among the 39 derived lines from indica-japonica hybridization, one was japonica type, 11 japonicaclinous type, 20 indicaclinous type and 7 indica type. The japonica proportion index in Minghui 502 was only 10.42%. The results of indica and japonica classification by ILP molecular markers and Cheng＇s index were relatively consistent. The correlation coefficient between the japonica proportion index and morphology index was 0.794＊＊, while that between the indica proportion index and morphology index was -0.7662＊＊. ILP markers could be used to accurately detect the proportion of indica/japonica content in the genome of a rice variety. The results of indica-japonica differentiation analysis could make reasonable explanation for that the hybrids obtained from indica-japonica type restorer lines had obvious heterosis. This conclusion would provide important guidance in efficient use of beneficial genes of inter-subspecific hybrid rice.
文摘The relationship between the indica-japonica differentiation of parents and heterosis of hybrid in rice was studied with 10 sterile lines, 10 maintainer lines of the sterile lines, 38 restorer lines of Dian type hybrid rice and 40 hybrids derived from the sterile lines and restorer lines. The results indicated that there was a parabolic correlation between the indica-japonica differentiation of parents detected by RAPD markers and heterosis of hybrid rice. When certain indica-japonica differentiation of parents exists, the percentage of combinations with positve heterosis and the mean heterosis of hybrids were high. But that didn't mean too much difference of parents could lead to stronger hetesosis, that meant overdiffernt parents seldom bring positve het-erotic hybrids. Suitable difference of percent of indica alleles of parents of stronger heterotic hybrid was 12 -16%.
基金supported by grants from the the Earmarked Fund for Modern Agro-industry Technology Research System of China(CARS-01-09B)the Natural Science Foundation of Zhejiang Province,China(Y13C130013)the Special Fund for Basic Scientific Research Business of Central Public Research Institutes,Chinese Academy of Agricultural Sciences(2012RG004-2)
文摘Spermidine（Spd） is known to be involved in the regulation of plant responses to chilling stress and counteract the adverse effect of stress conditions.Antioxidant activities,endogenous hormones and ultrastructure change under chilling stress were investigated in indica-japonica hybrid rice seedlings.12-d-old seedlings were subjected to exogenous Spd（1 mmol L^（-1）） and then a chilling stress（6℃,4 d） was induced,followed by a subsequent recovery（25℃,4 d）.Results showed that malondialdehyde（MDA） and proline content were enhanced significantly,whereas shoot fresh and dry weights decreased during chilling stress and after recovery;chlorophyll content of chilling-stressed seedlings increased slightly but declined after recovery;additionally,total soluble sugar,sucrose,fructose and starch contents increased significantly during chilling stress,and only soluble sugar and fructose contents were observed in increase after recovery;chilling stress-induced increases in superoxide dismutase（SOD）,peroxidase（POD） and catalase（CAT） activities,but declined after recovery,and the level of ascorbate peroxidase was lower during chilling stress and after recovery;however,endogenous indole-3-acetic acid（IAA）,zeatin riboside（ZR）,gibberellic acid（GA_3）,and abscisic acid（ABA） levels were induced decreased compared with Spd pretreatment.The microscopic analysis revealed that chilling stress-induced destruction of the chloroplast envelope during chilling stress and increased the number of plastoglobuli along with aberrations in thylakoid membranes after recovery.In contrast,exogenous Spd protected rice seedlings from chilling-induced injuries in terms of lower malondialdehyde,proline and carbohydrates accumulation coupled with increased endogenous hormones metabolism.After recovery,Spd pretreatment chilling-exposed seedlings showed higher activities of antioxidant enzymes and normal physiological function of chloroplasts.These results suggest that Spd could promote effectively chilling tolerance which might be largely attributable to the integrity of cell structure and normal metabolism of endogenous hormones in indica-japonica hybrid rice seedlings.
基金supported by the National Key Technology R & D Program of China (Grant No. 2006BA01A01-7)
文摘Taking the main parents （10 male sterile lines and 10 restorer lines） and their 100 combinations of japonica hybrid rice in northern China as materials, the relationships of parental indica-japonica indexes determined by the methods of the Cheng’s index as well as simple sequence repeat （SSR） markers with yield and grain quality traits of hybrid rice were studied. For the parents, the Cheng’s index （Chi） ranged from 13.5 to 19.3 and the indica index in SSR markers （ADi） were from 0.12 to 0.38. The classification of parents by Chi was not completely consistent with that by ADi. The Chi of male parent was more closely related to hybrid traits than that of female parent, as contrasted to ADi. At the same time, the difference between parents （PD） in Chi was more closely related to hybrid traits than that in ADi. The indica-japonica indexes of parents and their difference between parents appeared quadratic relationship to hybrid traits with the critical extremum. The directions of the correlation of indica-japonica indexes of parents and their differences with hybrid yield traits were on the opposition to those with hybrid grain quality traits. Therefore, the female parent should match the male parent moderately in indica-japonica index to obtain the optimum of hybrid traits, high yield as well as good quality.
基金supported financially by the National Natural Science Foundation of China.
文摘By using 19 pairs of primers that could identify two subspecies （indica and japonica） of cultivated rice （Oryza sativa L.）, the indica-japonica differentiation of 56 individuals from the natural population of common wild rice （Oryza rufipogon Griff.） in Yuanjiang was analyzed by SSR （microsatellite DNAs, or simple sequence repeat）. Of the 19 pairs of primers, 17 pairs （89.47%） could amplify only one kind of band type among all of the individuals, but primers RM251 and RM18 could amplify polymorphic band types. The bands amplified by 16 pairs of primers （84.21%） were identical to the indica-japonica diagnostic bands of relevant locus in cultivated rice, including 11 japonica-like loci and 4 indica-like loci. The bands amplified by the other three pairs of primers （RM18, RM202, RM205） were different from indica or japonica diagnostic bands of cultivated rice. The results showed that according to 19 loci analyzed, 84.21% of SSR loci in genomic DNA of common wild rice in Yuanjiang displayed indica-japonica differentiation and 13.79% of the loci still kept primitive, and most of the detected loci were homoaenetic in the natural population.
文摘Based on a series of polyploid indica-japonica hybrid plant lines obtained from a new breeding strategy of using double predominance of wide cross and polyploidization to breed super flee, two polyploid indica-japonica hybrids, PSR073 and PSR120 were studied in their growth periods to show the powerful heterosis in a larger scale and to study the characteristics of polyploid indica-japonica hybrids more elaborately. The leaf age, tiller growth, flowering habits, and agronomic traits of them were observed to analyze their growth habits and characteristics. The results showed that the.agronomic traits of PSR073 and PSR120, such as the plant height, panicle length, grain length, grain width, and 1000-grain weight, all acquired obvious predominance of polyploidy, and that the seed setting rate was more than 83%. No significant difference was observed between the two tetraploids and common diploids in the leaf age, tiller growth, and flowering habits. It was concluded that the characteristics of the two powerful heterosis polyploid hybrids were different from those of the polyploid rice reported earlier. Wide cross and polyploidization had no negative effects on their growth habits and characteristics; on the contrary these had powerful heterosis. This had provided theoretic and practical evidences for their application to agricultural production.
文摘The developmental genetic behaviors of brown rice width （BRW） have been studied in indica-japonica hybrid rice （Oryza sativa L.）, in which seven indica male sterile lines and five japonica restorer lines were applied, by using the developmental genetic models and corresponding statistical approaches for quantitative traits of triploid in cereal crops. The BRW of indica-japonica hybrid rice was co-determined by gene expression of tdploid endosperm, cytoplasm, diploid maternal plant and their genotype × environmental interaction effects. Unconditional analysis showed that the endosperm additive and matemal additive effects were predominant for the development of BRW from early- to late-stage of the grain development, but the endosperm dominant effect together with matemal effect and cytoplasmic effect became the major factor determing the BRW at the ripening stage. Moreover, conditional analysis found that there were new onset and offset of gene expression at different developmental stages of BRW in indica-japonica hybrid rice. Maternal and cytoplasm general heritabilities and their interaction heritabilities were more important compared to other components of heritability for BRW at all the five developmental stages.
文摘Genetic control of leucine content in indica-japonica hybrid rice (Oryza sativa L.) was studied in 35 crosses of F1 and F2 generations, which were derived from crossing 7 male sterile indica rice lines with 5 restorer japonica rice lines along with their parents. Two genetic models and their corresponding statistical methods for quantitative traits of triploid seeds in cereal crops were used for the analysis. The first was the unconditional genetic model, which refers to the analysis of cumulative measurements (from flowering to a specific time) along the developmental stages, while the second was the conditional genetic model, which relates to analysis from one developmental stage to another stage (t - 1→t). The results showed that leucine content of indica-japonica hybrid rice was controlled by the expression of triploid endosperm effect (endosperm additive effect and endosperm dominant effect), cytoplasm effect, diploid maternal plant effect (maternal additive effect and maternal dominant effect) and their environmental interaction effects. Of these effects, endosperm dominant effect and maternal dominant effect were more important at the earlier stages, while endosperm additive effect and maternal additive effect were more important at the later stages of rice grain development under both unconditional and conditional genetic analyses. Due to the high heritabilities, which came from endosperm, maternal and cytoplasm effects for leucine content at different developmental stages, selection for leucine content of indica-japonica hybrid rice would be more efficient at early generations in breeding programs.
基金supported by the National High-Tech ‘863’ Program of China (No. 2002AA224041)the National Natural Science Foundation of China (No.30771318)
文摘The rice indica/japonica hybrid shows strong heterosis.However,such inter-subspecific hybrid can＇t be directly used in rice production due to its low spikelet fertility.The S5 locus was proved to be associated with fertility of indica/japonica hybrid and its S5n allele from wide-compatibility variety （WCV） is capable to overcome fertility barrier.In the present study,we reported the causal sites in the S5 locus responsible for compatibility of indica/japonica hybrid.Fine-mapping of the S5 locus using the 11 test-cross families pinpoints a candidate S5 locus encoding aspartic protease （Asp）.Intragenic recombination within the Asp gene happened in a number of recombinants,resulting in chimeric S5j-S5n alleles.Just like S5n,the chimeric S5j-S5n allele displayed higher spikelet fertility when combined with the S5i allele.In the complementary test,however,the S5n allele from WCVs failed to enhance fertilities of the indica/japonica hybrids.Compared to both indica and japonica varieties,all nine WCVs from different resources are characterized with a 136 bp deletion in the Asp N-terminus,which probably renders the S5n allele non-functional.Furthermore,an A/C polymorphic site is detected 1,233 bp downstream of the Asp start codon.The heterozygous A/C site of the Asp gene in indica/japonica hybrid is believed to be the casual factor to cause partial sterility.The functional makers based on the two polymorphic sites will be broadly used in developing wide-compatibility rice varieties.
文摘大穗型籼粳杂交稻颖花容易退化,为明晰氮素对籼粳杂交稻颖花退化的缓解效应及其调控作用,本研究以大穗型籼粳杂交稻甬优538为试验材料,于2023年和2024年进行试验,设置S_(1)(4月20日播种)、S2(5月10日播种)和S_(3)(5月30日播种)3个播期,180 kg hm^(-2)(N12)、270 kg hm^(-2)(N18)2种总施氮量,以及T_(1)(在叶龄余数3.5施用100%穗肥)、T_(2)(在叶龄余数1.5施用100%穗肥)和T_(3)(在叶龄余数3.5施用50%穗肥+叶龄余数1.5施用50%穗肥)3种穗肥施用方式,分析比较不同处理下产量与产量构成、分蘖动态、颖花分化与退化、干物质积累和单朵颖花干物质占比变化。结果表明,(1)S_(1)播期下N18T_(2)处理的产量最高,较S_(3)播期下N12T_(1)处理的产量平均提高46.83%;其中播期对结实率影响最为显著,其次影响每穗粒数;不同施氮量对有效穗数和穗粒数有显著影响,N18处理较N12处理的穗粒数平均提高14.44%,有效穗数平均提高12.88%。(2)不同施氮量和穗肥施用时间对每穗粒数的影响主要在于颖花发育,N18处理较N12处理的氮含量平均提高22.51%,2023年和2024年颖花分化数分别提高12.12%和15.35%,现存颖花数分别提高16.00%和13.60%。穗肥施用时间后移可有效缓解颖花退化,其中N12T_(3)处理平均提高植株氮含量31.58%,N18T_(2)处理平均提高26.29%;T_(2)时期施用保花肥,颖花退化率较T_(1)平均减少18.20%,较T_(3)平均减少5.48%。(3)颖花发育直接依赖于干物质积累,N18处理较N12处理,穗分化始期干物质积累量(DM-SDI)显著提高6.96%,穗发育期间干物质积累量(DM-SD)显著提高15.08%,颖花分化数与DM-SDI、DM-SD呈正相关关系,干物质积累越多,颖花分化数越多。(4)不同穗肥施用时间显著影响穗分化期间单朵颖花的干物质占比(SSDM-SD),T_(2)>T_(3)>T_(1);颖花退化与SSDM-SDI、SSDM-SD呈负相关关系,单朵颖花干物质越小,颖花退化率越高。综上,合理的氮素穗肥通过调控干物质积累来影响籼粳杂交稻颖花形成,叶龄余数1.5时增施穗肥有利于提高单朵颖花的干物质占比,支撑颖花生存和发育,有效缓解颖花退化,增加每穗粒数。在实际生产中,可以适当提早播种,在减少氮肥施用的基础上优化氮肥运筹(施用促花肥和保花肥),可以延长营养生长期并提高单朵颖花干物质占比,促进颖花分化的同时减少颖花退化,进而达到籼粳杂交稻大穗栽培的目标。
基金This study was supported by the Italian Ministry of Environment and Environmental Protection,within the research project Application of biotechnology to the protection of the environment in collaboration with China.
文摘DNA polymorphisms from nucleotide insertion/deletions(InDels)in genomic sequences are the basis for developing InDel molecular markers.To validate the InDel primer pairs on the basis of the comparative genomic study on DNA sequences between an Indica rice 93-11 and a Japonica rice Nipponbare for identifying Indica and Japonica rice varieties and studying wild Oryza species,we studied 49 Indica,43 Japonica,and 24 wild rice accessions collected from ten Asian countries using 45 InDel primer pairs.Results indicated that of the 45 InDel primer pairs,41 can accurately identify Indica and Japonica rice varieties with a reliability of over 80%.The scatter plotting data of the principal compo-nent analysis(PCA)indicated that:(i)the InDel primer pairs can easily distinguish Indica from Japonica rice varieties,in addition to revealing their genetic differentiation;(ii)the AA-genome wild rice species showed a relatively close genetic relationship with the Indica rice varieties;and(iii)the non-AA genome wild rice species did not show evident differentiation into the Indica and Japonica types.It is con-cluded from the study that most of the InDel primer pairs obtained from DNA sequences of 93-11 and Nipponbare can be used for identifying Indica and Japonica rice varieties,and for studying genetic relationships of wild rice species,particularly in terms of the Indica-Japonica differentiation.
