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Globin-like蛋白质折叠类型识别 被引量:8
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作者 任文科 徐海松 李晓琴 《生物化学与生物物理进展》 SCIE CAS CSCD 北大核心 2008年第5期548-554,共7页
蛋白质折叠类型识别是蛋白质结构研究的重要内容.以SCOP中的Globin-like折叠为研究对象,选择其中序列同一性小于25%的17个代表性蛋白质为训练集,采用机器和人工结合的办法进行结构比对,产生序列排比,经过训练得到了适合Globin-like折叠... 蛋白质折叠类型识别是蛋白质结构研究的重要内容.以SCOP中的Globin-like折叠为研究对象,选择其中序列同一性小于25%的17个代表性蛋白质为训练集,采用机器和人工结合的办法进行结构比对,产生序列排比,经过训练得到了适合Globin-like折叠的概形隐马尔科夫模型(profile HMM)用于该折叠类型的识别.以Astral1.65中的68057个结构域样本进行检验,识别敏感度为99.64%,特异性100%.在折叠类型水平上,与Pfam和SUPERFAMILY单纯使用序列比对构建的HMM相比,所用模型由多于100个归为一个,仍然保持了很高的识别效果.结果表明:对序列相似度很低但具有相同折叠类型的蛋白质,可以通过引入结构比对的方法建立统一的HMM模型,实现高准确率的折叠类型识别. 展开更多
关键词 蛋白质 折叠类型识别 globin-like 隐马尔科夫模型 结构比对
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ISOBUTYRAMIDE ACTIVATES TRANSCRIPTION OF HUMAN FETAL γ-AND MURINE EMBRYONIC εy-GLOBIN GENES
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作者 张俊武 张雪青 陈平 《Chinese Medical Sciences Journal》 CAS CSCD 2001年第4期187-193,共7页
Objective. To examine the effect of isobutyramide synthesized in our laboratory on human and murine globin gene expression and to test cell toxicity ofthe drug.Methods. MEL cells were transfected with the recombinant ... Objective. To examine the effect of isobutyramide synthesized in our laboratory on human and murine globin gene expression and to test cell toxicity ofthe drug.Methods. MEL cells were transfected with the recombinant construct μLCRAγψβδβand the stable transformants were cultured in the medium with different concentrations of isobutyramide. The experimental mice and rabbit were injected with different doses of isobutyramide. The globin mRNAs were analyzed by RNase protection assay. The hematological toxicity and electrolyte toxicity ofthe drug were tested.Results. An inducible and dose dependent expression of the human γ , β and mouse α globin gene was observed in the transfected MEL cells. The induction of the human γ globin gene is significant stronger than that of the β globin gene. With 2.5~5 mmol/L isobutyramide, the induction of the human γ globin gene is even more effective than that of mouse α globin gene. After a 15 day injection under the doses of 500~900mg·kg-1·d-1, the level of the mouse embryonic εy globin mRNA could be significantly induced up to 3~4 fold of that of uninjected controls. The changes of hemoglobin(Hb), RBC, hematocrit(HCT), WBC, derived from mice injected with different doses of isobutyramide at the interval of 24 hours for 2~4 weeks, were generally within the normal range. In rabbits injected with isobutyramide in the same regiment for 2 weeks, the concentration of blood K+, Na+, Cl-and CO2 were all within normal range and serum ionic osmotic pressure remained stable as well. Conclusion. Our results suggested that isobutyramide is a weak inducer ofcell differentiation, but it can selectively activate transcription of human γ globin gene at a certain degree, and it can act on early stages of erythroid progenitor differentiation in adult mice and activate transcription of embryonic εy-globin gene and have no hematological toxicity. Our results have further proved the potential value of isobutyramide in treatment of β-thalassemia and sickle cell disease. 展开更多
关键词 isobutyramide human fetal γ globin gene murine embryonic εy globin gene β thalassemia
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Co-Inheritance of Beta &Delta-Globin Gene (HbYialousa) Mutations in an Iranian <i>β</i>-Thalassemia Carrier
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作者 Atefeh Valaei Farnaz Eghbalpour +4 位作者 Zahra Kainimoghaddam Fatemeh Bayat Maryam Taghavi Basmanj Morteza Karimipoor Sirous Zeinali 《International Journal of Clinical Medicine》 2012年第7期633-636,共4页
Introduction: Beta-thalassemia is characterized by absence or reduced synthesis of the β-globin. Carriers of β-thalas- semia, typically have microcytic hypochromic anemia and elevated hemoglobin HbA2 and normal HbF ... Introduction: Beta-thalassemia is characterized by absence or reduced synthesis of the β-globin. Carriers of β-thalas- semia, typically have microcytic hypochromic anemia and elevated hemoglobin HbA2 and normal HbF level. On the other hand carriers of severe alpha-thalassemia also have similar CBC parameters to that of β-thalassemia with normal HbA2 level. Co-presence of mutations in the β-globin and delta-globin genes (point mutations or deletions) usually give normal HbA2 and elevated HbF level. We report a β-thal carrier with normal level of HbA2 and increased level of HbF who had a point mutation in CD39 on the beta-globin gene and a point mutation in CD27 on the δ-globin gene named Hb-Yialousa. Materials & Methods: An individual with low hematological indices, normal HbA2 and elevated HbF was referred to our center as routine premarital screening program. Mutations in the β-globin and δ-globin genes were screened using ARMS and sequencing methods. Results: The mutation in β- and δ-globin genes were identified as CD39 and CD27 (HbYialousa) respectively. No point mutation or deletion in α-globin gene was identified. Discussion: We showed that normal HBA2 with elevated HbF level is due to co-inheritance of delta-globin gene mutation with mutation in the β-globin gene. When screening for β-thalassemia, one has to either rule out presence of α-globin gene mutation of mutation in the delta-globin gene. 展开更多
关键词 δ-globin GENE Β-THALASSEMIA HbYialousa Β-globin GENE CD39
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Incidence of Sickle Cell Disease and Other Hemoglobinopathies in Burkina Faso: Results of a Five-Year Systematic Neonatal Screening (2015-2019) in Four Urban Hospitals
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作者 Salam Sawadogo Koumpingnin Nebie +7 位作者 Donatien Kima Hélène Traore Savadogo Jean De Dieu Sanou Dieudonné Ouedraogo Paul Ouedraogo Hyacinthe Zamane Abdoulaye Ndiaye Eléonore Kafando 《Open Journal of Blood Diseases》 CAS 2022年第4期87-97,共11页
Hemoglobinopathies, mainly Sickle cell disease (SCD), are the most common monogenic disorders in Africa. In Burkina Faso, data on these diseases are scarce, mainly hospital-based in Ouagadougou and its surroundings. I... Hemoglobinopathies, mainly Sickle cell disease (SCD), are the most common monogenic disorders in Africa. In Burkina Faso, data on these diseases are scarce, mainly hospital-based in Ouagadougou and its surroundings. In order to assess the incidence and allelic frequencies of the main hemoglobinopathies in newborns in Burkina Faso, we conducted a cross-sectional study from 2015 to 2019 in four hospitals. The study included babies of both sexes, regardless of ethnic group and parents’ hemoglobin status. It was a newborn screening and hemoglobin variants were detected using isoelectric focusing on cord blood samples and confirmed using hemoglobin electrophoresis by high-performance liquid chromatography. The proportions and cumulative incidences of the different hemoglobinopathies were computed. Hardy-Weinberg equilibrium law was applied to calculate genotypic and allelic frequencies. The significant level was p < 0.05. Out of 11,337 newborns included, 47.8% were males and 60.2% were from Bobo-Dioulasso. Abnormal hemoglobin was found in 27.1%, representing a cumulative incidence of 1:4 newborns. The incidence of SCD was 1.9% (1:53 newborns) with 27.9% of homozygous SS. Homozygous CC and compound heterozygous Cβ-Thalassemia accounted for 1.1%. SCD cases were 1.51 times higher in Bobo-Dioulasso (OR = 1.51;95% CI [1.09 - 2.10]: p = 0.013). The observed genotype frequencies were significantly different from the expected ones (p 0.001). The βS and βC alleles represented 5.1 and 9.9%, respectively. This study showed a high incidence of hemoglobinopathies. Such results raise the question of control strategies for these hemoglobinopathies in our country. 展开更多
关键词 Abnormal Hemoglobin β-globin Gene Newborn Screening Isoelectric Focusing
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乌鳢globin基因家族的鉴定及在鳃和鳃上器官中的表达模式分析
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作者 陶泽鑫 李建龙 +4 位作者 温海深 李超 孙冬磊 陈基伟 李昀 《中国海洋大学学报(自然科学版)》 CAS CSCD 北大核心 2023年第3期141-151,共11页
为了探究珠蛋白(Globin)在具有耐低氧和空气呼吸能力的乌鳢(Channa argus)中发挥的作用,本文对乌鳢的globin基因家族进行研究。在基因组中鉴定得到18个globin基因,分属于Hb、Mb、Ngb和Cygb四个亚家族,其中Hb亚家族拷贝数最多,达14个,其... 为了探究珠蛋白(Globin)在具有耐低氧和空气呼吸能力的乌鳢(Channa argus)中发挥的作用,本文对乌鳢的globin基因家族进行研究。在基因组中鉴定得到18个globin基因,分属于Hb、Mb、Ngb和Cygb四个亚家族,其中Hb亚家族拷贝数最多,达14个,其余各亚家族仅有1~2个拷贝。系统进化分析表明,乌鳢globin基因与硬骨鱼类聚为一枝,在进化上较为保守。对乌鳢globin基因结构分析得到4种保守结构域和5个motif。利用转录组测序技术对仔稚鱼(受精后3~8 d)和幼鱼(4月龄)的鳃和鳃上器官中globin基因进行表达量检测。在仔稚鱼中,hbae1(包括hbae1.1、hbae1.2和hbae1.3)、hbb2(包括hbb2.1、hbb2.2和hbb2.4)和hbaa的表达量在鳃上器官发育过程中呈显著升高趋势,而hba1和hbb1的表达量则显著降低。在幼鱼中,在空气暴露胁迫后,hbb2.2和cygb的表达量在鳃和鳃上器官中均发生显著变化,hbae1.1、hbae1.2和hbba的表达量在鳃中发生显著变化,hbae1.3和hbb2.1的表达量在鳃上器官中发生显著变化。这些在鳃上器官发育过程中和空气暴露胁迫中表达量出现显著变化的globin基因可能在乌鳢空气呼吸及低氧胁迫中发挥了生物学功能。 展开更多
关键词 乌鳢 空气呼吸 globin基因 空气暴露
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Intragenic and intergenic sequences regulating the expression of the 5'-to-5' linked adult α-and β-globin genes from large yellow croaker Pseudosciaena crocea 被引量:1
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作者 CHU Wuying YU Lian +5 位作者 QIAN Ronghua MENG Tao ZHOU Ruixue FU Guihong CHEN Jia ZHANG Jianshe 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2008年第5期126-133,共8页
One adult α-globin gene and one β-globin gene have been cloned from the large yellow croaker Pseudosciaena crocea. Linkage analysis indicated that the α- and β-globin genes were oriented head-to-head relative to e... One adult α-globin gene and one β-globin gene have been cloned from the large yellow croaker Pseudosciaena crocea. Linkage analysis indicated that the α- and β-globin genes were oriented head-to-head relative to each other. To identify the regulatory elements present in the intergenic and intragenic regions of the globin complex, the intergenic region alone or together with the β-globin gene first intron was cloned into the luciferase-reporter vector pGL3-Basic respectively, and the chimeric constructs were tran- siently transfected into Vero cells and primary fish erythrocytes. The intergenic region cannot support the high-level expression of luciferase. However, the promoter activity of the intergenic region was strongly stimulated by the positive regulatory elements (PRE) located in the β-globin gene intron 1. Thus, it is proposed that the intergenic promoters and intragenic PRE were necessary for the effective expression of the linked α- and β-globin genes. 展开更多
关键词 globin INTERGENIC intragenic INTRON large yellow croaker PROMOTER regulation
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Chromatin-binding in vivo of the erythroid kruppel-like factor,EKLF,in the murine globin loci 被引量:2
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作者 Yu-Chiau Shyu Shau-Ching Wen +6 位作者 Tung-Liang Lee Xin Chen Chia-Tse Hsu Hsin Chen Ruei-Lin Chen Jau-Lang Hwang Che-Kun James Shen 《Cell Research》 SCIE CAS CSCD 2006年第4期347-355,共9页
EKLF is an erythroid-specific, zinc finger-containing transcription factor essential for the activation of the mammalian beta globin gene in erythroid cells of definitive lineage. We have prepared a polyclonal anti-mo... EKLF is an erythroid-specific, zinc finger-containing transcription factor essential for the activation of the mammalian beta globin gene in erythroid cells of definitive lineage. We have prepared a polyclonal anti-mouse EKLF antibody suitable for Western blotting and immunoprecipitation (IP) qualities, and used it to define the expression patterns of the EKLF protein during mouse erythroid development. We have also used this antibody for the chromatin-immunoprecipitation (CHIP) assay. EKLF was found to bind in vivo at both the mouse beta-major-globin promoter and the HS2 site of beta-LCR in the mouse erythroleukemia cells (MEL) in a DMSO-inducible manner. The DMSO-induced bindings of EKLF as well as three other proteins, namely, RNA polymerase Ⅱ, acetylated histone H3, and methylated histone H3, were not abolished but significantly lowered in CB3, a MEL-derived cell line with null-expression of p45/NF-E2, an erythroid-enriched factor needed for activation of the mammalian globin loci. Interestingly, binding of EKLF in vivo was also detected in the mouse alpha-like globin locus, at the adult alpha globin promoter and its far upstream regulatory element alpha-MRE (HS26). This study provides direct evidence for EKLF-binding in vivo at the major regulatory elements of the mouse beta-like globin gene clusters the data also have interesting implications with respect to the role of EKLF-chromatin interaction in mammalian globin gene regulation. 展开更多
关键词 EKLF murine globin gene clusters chromatin-immunoprecipitation (CHIP) chromosome structure
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Identification and characterization of adult alpha-and beta-globin genes and their genomic arrangement in Pseudosciaena crocea 被引量:1
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作者 CHU Wuying QIAN Ronghua +3 位作者 WANG Lianshen YU Xiameng YOU Zhenqiang YU Lian 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2006年第4期65-76,共12页
The α- and β-globin genes from Pseudosciaena crocea were cloned by rapid amplification of cDNA 3 '-end ( 3 '-RACE). The cDNA of the α-globin is 595 bp with the ATG start codon located at Position 37, the TAA st... The α- and β-globin genes from Pseudosciaena crocea were cloned by rapid amplification of cDNA 3 '-end ( 3 '-RACE). The cDNA of the α-globin is 595 bp with the ATG start codon located at Position 37, the TAA stop codon at Position 469 and the AATAAA polyadenylation signal at Position 560, which codifies 145 amino acids. The entire open reading frame of the β-globin gene is 447 bp long, which encodes 148 amino acids. Amino acid identity of the α- globin or β-globin gene compared with those reported in other fish species, ranged from 31.9% to 76.4%. When comparing with human α- and β-globins, three important alterations in the structural regions can be noted: ct39 Thr→Gln, α113 His→Tyr and β117 His→Lys. The α-globin has a unique inserted amino acid residue in the 47th position. To understand the process of globin gene duplication and identify the regulatory elements present in the intergenic and intragenic regions of globin genes, the genomic arrangement of α- and β-globin genes was investigated. The results showed that the orientation of the two genes was head-to-head relative to each other. The intergenic region between the translation initiation codons of the linked α- and β-globin genes contains classical promoter elements and the length of it is much shorter than that reported in other fish. 展开更多
关键词 Pseudosciaena crocea globin gene cloning structural region HEAD-TO-HEAD regulatory elements
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PREDOMINANT EXPRESSION OF HUMAN Aγ-IN CONTRAST WITH β-GLOBIN GENE IN MEL CELLS TRANSFECTED WITH THE CONSTRUCT μLCRAγψβδ 被引量:1
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作者 张俊武 Stamatoyannopoulos,George 《Chinese Medical Sciences Journal》 CAS CSCD 1999年第1期31-37,共7页
A cosmid construct μLCRAγψβδβ were induced into mouse erythroleukemia cell lines 585 that expresses murine adult globin only and MEL GM 979 that expresses both murine embryonic and ad... A cosmid construct μLCRAγψβδβ were induced into mouse erythroleukemia cell lines 585 that expresses murine adult globin only and MEL GM 979 that expresses both murine embryonic and adult globins.Similar patterns of human globin gene expression were displayed in the two MEL cell lines transfected with the construct.Inducible expression of the Aγ and β gene was observed during induced cell differentiation.However,the expression level of the Aγ globin gene is much higher than that of the β globin gene in either uninduced or induced MEL transformants.No γ to β switching happened in the stable MEL transformants following a continuous culture.The much more effective enhance of the μLCR on the Aγ globin gene than that on the β globin gene is resulted probably from the fact that the distance between the LCR and the β globin gene is much longer than that between the LCR and the Aγ globin gene in the construct,in comparison with other constructs containing HS2 or μLCR linked to both of γ and β globin genes in different order.Two suggestions can be derived from these results:1) A competition between the γ and β globin gene for interaction with the LCR may indeed present,but only an enough long distance difference between the LCR to the γ and to the β gene can effectively influence the competition;2) Unlike transgenic mice,MEL cells are incapable of reconstructing the regulatory information involved in developmental control when it is provided by a fragment of the β globin gene cluster with limited length. 展开更多
关键词 human globin genes gene expression MEL cells
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Application of α-globin 3′hypervariable region to gene diagnosis of adult polycystic kidney disease
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作者 陈国强 曾瑞萍 《Journal of Medical Colleges of PLA(China)》 CAS 1993年第1期94-97,共4页
Seventy-four members from 9 adult polycystic kidney disease(APKD)familieswere analysed with Southern blot and 3′hypervariable region/Pvu Ⅱ,3′HVR/Bgl ⅡRFLPs.The results showed that 3′ HVR fragments were highly pol... Seventy-four members from 9 adult polycystic kidney disease(APKD)familieswere analysed with Southern blot and 3′hypervariable region/Pvu Ⅱ,3′HVR/Bgl ⅡRFLPs.The results showed that 3′ HVR fragments were highly polymorphic.Theheterozygote frequencies of Pvu Ⅱ,Bgl Ⅱ and PvuⅡ+Bg1Ⅱ fragments were 92%,84.7%and 98.6%,respectively.The maximum lod score for linkage between 3′HVR and APKDwas 9.71 at a recombination fraction 0.045.We successfully applied 3′HVR probe to thegene diagnosis of 17 symptomatic patients and 7 patients in the presymptomatic stage. 展开更多
关键词 globin KIDNEY POLYCYSTIC GENE DIAGNOSIS
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Retroviral mediated human β-globin gene transfer and expression in vitro
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作者 Depei Liu, Chih-Chuan Liang National Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100005 《中国实验血液学杂志》 CAS CSCD 1997年第3期286-286,共1页
Retroviral mediated gene transfer of humanglobin gene into hematopoietic stem cells is apromising approach for thalassemia gene therapy.Major problem of the transferred globin gene was lowlevel expression of the gene ... Retroviral mediated gene transfer of humanglobin gene into hematopoietic stem cells is apromising approach for thalassemia gene therapy.Major problem of the transferred globin gene was lowlevel expression of the gene with its proximal cis-acting sequence. The locus control region (LCR) ofthe human β-globin gene cluster consists of four majorDNase I hypersensitive sites (HS). When linked 展开更多
关键词 globin hematopoietic proximal HYPERSENSITIVE locus enhancer packaging Major TRANSFERRED induction
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Immobilization of Hemoglobin on Platinum Nanoparticles-Modified Glassy Carbon Electrode for H_2O_2 Sensing
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作者 QIAN Gongming YANG Changzhu +1 位作者 ZHANG Jingdong PU Wenhong 《Wuhan University Journal of Natural Sciences》 CAS 2010年第2期160-164,共5页
This work described an amperometric hydrogen peroxide (H2O2) biosensor based on immobilization of hemoglobin (Hb) on a glassy carbon (GC) electrode modified by platinum nanoparticles, which was prepared by an in... This work described an amperometric hydrogen peroxide (H2O2) biosensor based on immobilization of hemoglobin (Hb) on a glassy carbon (GC) electrode modified by platinum nanoparticles, which was prepared by an in situ chemical reductive growth method. The electrochemical impedance measurements confirmed that the Hb was immobilized on the platinum nanoparticles-modified glassy carbon surface and has a synergistic effect with platinum nanoparti- cles in improving the catalytic reduction of H2O2. The Hb immobi- lized platinum nanoparticles-modified GC (Hb/Pt/GC) electrode displays an effective catalytic response to the reduction of H2O2. A linear dependence of the catalytic current versus H2O2 concentration was obtained in the range of 5.0×10 6 to 4.5×10^-4 mol·L^-1 with a detection limit (S/N=3) of 7.4×10^-7 mol·L-1. 展开更多
关键词 hydrogen peroxide platinum nanoparticles hemo-globin electrocatalytic activity
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Canalization of globins in the adaptive evolution of birds
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作者 Xiaojia Zhu Le Yang +5 位作者 Quanjian Tao Xiran Wang Ghulam Nabi Fumin Lei Xiaoping Yu Dongming Li 《Avian Research》 2025年第4期764-774,共11页
The globin superfamily,central to oxygen(O_(2))cascade dynamics,exemplifies how canalization—evolutionary stabilization of phenotypic traits—enables vertebrates to thrive in extreme environments.In birds,hemoglobins... The globin superfamily,central to oxygen(O_(2))cascade dynamics,exemplifies how canalization—evolutionary stabilization of phenotypic traits—enables vertebrates to thrive in extreme environments.In birds,hemoglobins(Hbs)serve as a paradigm of this process,with structural and functional canalization underpinning their exceptional aerobic capacity and elevational diversification.Despite significant advances of globins in our understanding of avian aerobic adaptation,a comprehensive synthesis of functional diversity,molecular evolution,and structural innovation is essential to fully elucidate their canalized roles in O_(2)homeostasis.Integrating perspectives on globin functional diversity and structural evolution,this review examines how chance(mutation/fixation biases)and contingency(historical genetic/epistatic constraints)shape Hb divergence and parallelism,thereby bridging molecular mechanisms with physiological adaptation in birds.We highlight how avian Hbs,canalized through compensatory substitutions and allosteric regulation,achieves a balance between evolutionary robustness and adaptive plasticity.However,critical gaps remain persist:the roles of understudied globins(e.g.,neuroglobin,globin E)and the mechanisms of genetic assimilation in migratory taxa.We propose an integrative framework that incorporates ecological divergence(elevation,flight endurance),phylogenetic timescales,and systems biology to unravel how canalization directs adaptive compromise.By focusing on birds within the amniotes,this synthesis advances a cohesive model for vertebrate evolution,wherein canalized globins reconcile metabolic precision with ecological innovation.Ultimately,this review refines hypotheses of O_(2)cascade evolution and calls for cross-disciplinary studies to decode the genetic and physiological architecture underlying adaptive canalization in extreme environments. 展开更多
关键词 Adaptive evolution Genetic canalization globin superfamily Hemoglobins Oxygen cascade Structural evolution
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单分子实时测序在α珠蛋白基因三联体及其复合变异等位基因鉴定中的临床应用
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作者 张宇 方艳平 +3 位作者 朱碧青 梁丽仪 周万军 江凌晓 《国际检验医学杂志》 2025年第1期32-37,43,共7页
目的探究单分子实时测序(SMRT)技术在α珠蛋白基因三联体(简称α三联体)及其复合变异等位基因鉴定中的临床应用效果。方法收集α三联体阳性样本36例,其中经PCR-导流杂交技术确认28例、经高通量测序(NGS)技术确认8例。36例样本包含α三... 目的探究单分子实时测序(SMRT)技术在α珠蛋白基因三联体(简称α三联体)及其复合变异等位基因鉴定中的临床应用效果。方法收集α三联体阳性样本36例,其中经PCR-导流杂交技术确认28例、经高通量测序(NGS)技术确认8例。36例样本包含α三联体复合变异顺式或反式排列未明样本ααα^(anti4.2)复合α^(CS)α2例,ααα^(anti4.2)复合-α^(3.7)10例,HKαα/--SEA型待确证2例,均采用SMRT技术进行地中海贫血(简称地贫)基因检测。另招募一个基因型为ααα^(anti4.2)复合-α^(3.7)变异病例的家系,包含先证者(Ⅱ-1)和其父亲(Ⅰ-1)、母亲(Ⅰ-2),采用PCR-导流杂交和SMRT技术进行地贫基因检测。结果SMRT技术检测结果显示,36例样本中共检出35例α三联体,1例αααα^(anti4.2)型α珠蛋白基因四联体(简称α四联体)。2例ααα^(anti4.2)复合α^(CS)α变异样本中ααα^(anti4.2)与α^(CS)α均为反式排列,基因型为ααα^(anti4.2)/α^(CS)α,10例ααα^(anti4.2)复合-α^(3.7)变异样本中ααα^(anti4.2)与-α^(3.7)为顺式排列样本9例,基因型为HKαα/αα,ααα^(anti4.2)与-α^(3.7)为反式排列样本1例,基因型为ααα^(anti4.2)/-α^(3.7)。相较PCR-导流杂交技术,SMRT技术多检出1例大片段缺失型β珠蛋白基因变异和2例未知变异,阳性检出率提高10.71%(3/28)。家系分析表明,先证者(Ⅱ-1)ααα^(anti4.2)和-α^(3.7)变异均遗传自母亲(Ⅰ-2),其基因型为HKαα/αα,与SMRT技术检测结果一致。结论SMRT技术不仅能够准确检测α三联体、α四联体及其复合变异等位基因,而且具有高准确性、一步到位识别2种变异顺式或反式排列、地贫基因变异覆盖全等优势,具有良好的临床应用价值。 展开更多
关键词 α珠蛋白基因三联体 HKαα 单分子实时测序 PCR-导流杂交技术 高通量测序
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A novel erythroid differentiation related gene EDRF1 upregulating globin gene expression in HEL cells
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作者 王敦成 黎燕 沈倍奋 《Chinese Medical Journal》 SCIE CAS CSCD 2002年第11期1701-1705,154-155,共5页
OBJECTIVE: To further characterize the differentiation inducing properties of EDRF1 and demonstrate its functional pathway involved in regulation of globin gene expression. METHODS: By transfecting EDRF1 sense and ant... OBJECTIVE: To further characterize the differentiation inducing properties of EDRF1 and demonstrate its functional pathway involved in regulation of globin gene expression. METHODS: By transfecting EDRF1 sense and antisense constructs into HEL cells, we identified the expression of globin and erythropoietin receptor genes by Northern blot analysis. RT-PCR and EMSA (electrophoresis mobility shift assay) were performed to monitor the expression and DNA-binding activity of erythroid specific transcription factors GATA-1 and NF-E2. RESULTS: It was shown that when EDRF1 was overexpressed, production of alpha-globin increased. In antisense EDRF1, overexpression of HEL cells, significant loss of alpha-, gamma-globin mRNA synthesis was observed. The transcription of endogenous GATA-1 and NF-E2 mRNA expression were maintained at the same levels compared with control experiments. However, the transcription activity of GATA-1 was severely impaired. Expression of erythropoietin receptor gene was not influenced by EDRF1 gene overexpression. CONCLUSION: The results suggested that EDRF1 regulated alpha- and gamma-globin gene synthesis by modulating DNA-binding activity of GATA-1 transcription factor. 展开更多
关键词 Gene Expression Regulation Cell Differentiation Cells Cultured DNA-Binding Proteins Erythroid-Specific DNA-Binding Factors ERYTHROPOIESIS GATA1 Transcription Factor globinS Humans NF-E2 Transcription Factor NF-E2 Transcription Factor p45 Subunit RNA Messenger Transcription Factors Up-Regulation
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β珠蛋白变体所致的高铁血红蛋白血症家族病例报告
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作者 吴帅 朱志威 +2 位作者 田鑫 张兵 贺湘玲 《中国循证儿科杂志》 北大核心 2025年第2期154-156,共3页
回顾性分析1例湖南省人民医院收治的β珠蛋白变体所致的高铁血红蛋白血症患儿的临床表现、实验室检查和基因检测结果。患儿,男,14岁,出生6个月起出现发绀,显示血红蛋白电泳3.23 min处可见异常Hb为24.8%,先证者存在HBB基因c.320T>A位... 回顾性分析1例湖南省人民医院收治的β珠蛋白变体所致的高铁血红蛋白血症患儿的临床表现、实验室检查和基因检测结果。患儿,男,14岁,出生6个月起出现发绀,显示血红蛋白电泳3.23 min处可见异常Hb为24.8%,先证者存在HBB基因c.320T>A位点(遗传自父亲、奶奶和叔叔)及c.52A>T位点(遗传自母亲)的双杂合突变。结合文献复习,先天性高铁血红蛋白血症多由系细胞还原酶系统缺陷或珠蛋白结构异常导致,在无心肺系统疾病情况下仍可出现发绀,且可伴随终生,血红蛋白电泳和基因检测有助于明确诊断。 展开更多
关键词 儿童 β珠蛋白变体 高铁血红蛋白血症 HBB基因 临床表型
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Immunosuppressant mycophenolic acid biosynthesis employs a new globin-like enzyme for prenyl side chain cleavage 被引量:3
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作者 Xiwei Chen Lu Wang +4 位作者 Jinmei Zhang Tao Jiang Changhua Hu Dehai Li Yi Zou 《Acta Pharmaceutica Sinica B》 SCIE CAS CSCD 2019年第6期1253-1258,共6页
Mycophenolic acid(MPA,1)and its derivatives are first-line immunosuppressants used in organ transplantation and for treating autoimmune diseases.Despite chemical synthetic achievements,the biosynthetic formation of a ... Mycophenolic acid(MPA,1)and its derivatives are first-line immunosuppressants used in organ transplantation and for treating autoimmune diseases.Despite chemical synthetic achievements,the biosynthetic formation of a seven-carbon carboxylic acid pharmacophore side chain of 1,especially the processes involving the cleavage of the prenyl side chain between DHMP(4)and DMMPA(5),remains unknown.In this work,we identified a membrane-bound prenyltransferase,PgMpaA,that transfers FPP to 4 to yield FDHMP(6).Compound 6 undergoes the first cleavage step via a new globin-like enzyme PgMpaB to form a cryptic intermediate 12.Heterologous expression of PgMpa genes in Aspergillus nidulans demonstrates that the second cleavage step(from 12 to 5)of 1 is a PgMpa clusterindependent process in vivo.Our results,especially the discovery of the broad tolerance of substrates recognized by PgMpaB,set up a strategy for the formation of"pseudo-isopentenyl"natural products using fungal globin-like enzymes. 展开更多
关键词 BIOSYNTHESIS Mycophenolic acid PRENYLATION C-C bond CLEAVAGE globin ENZYME
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贵阳及周边地区珠蛋白基因罕见突变类型分析
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作者 王侣金 兰冰雪 +6 位作者 杨雪 张禾璇 汤贤英 夏开德 金平 张琳琳 黄海 《贵州医科大学学报》 2025年第8期1220-1229,共10页
目的探讨贵阳及周边地区罕见珠蛋白基因突变类型及分布情况,为血红蛋白病的基因诊断及遗传咨询提供参考依据。方法收集地中海贫血基因检测的人群样本5574例,筛选出符合条件的588例全血样本,运用跨越断裂位点PCR(Gap-polymerase chain re... 目的探讨贵阳及周边地区罕见珠蛋白基因突变类型及分布情况,为血红蛋白病的基因诊断及遗传咨询提供参考依据。方法收集地中海贫血基因检测的人群样本5574例,筛选出符合条件的588例全血样本,运用跨越断裂位点PCR(Gap-polymerase chain reaction,Gap-PCR)检测缺失型突变、采用双脱氧链终止(Sanger测序)法进行基因序列测定,分析受检者是否携带罕见珠蛋白基因突变类型。结果在588例标本中,共检出罕见珠蛋白基因突变97例,阳性率为16.50%(97/588),主要为α和β珠蛋白基因突变,分别占27.83%(27/97)和50.52%(49/97),γ珠蛋白基因突变9例,δ珠蛋白基因突变2例,复合型突变10例;97例突变中基因型共50种,其中IVS-II-462(C>T)inβ,IVS-II-676(A>C)inβ,IVS-II-820(C>T)inβ,Codon112(-C)inα2,Codon125(CTG>TTG)inα2,IVS-I-60(C>T)inα1,NG_000007.3:g.64760(T>C)inδ,-314(G>T)in Aγ为新发现的基因突变类型。结论对于血液学筛查结果与基因检测结果不符,或表型与基因型不一致的受检者,建议进一步开展罕见珠蛋白基因突变检测,以明确其基因型,这不仅有助于降低血红蛋白病的漏检率,还可为预防出生缺陷、遗传咨询以及产前诊断等提供科学依据。 展开更多
关键词 罕见 珠蛋白 基因突变 漏检 遗传咨询
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α-地中海贫血的基因治疗研究进展
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作者 刘倩宜 李欣瑜 +1 位作者 方建培 黄军就 《广西医科大学学报》 2025年第5期655-662,共8页
α-地中海贫血由α-珠蛋白基因(HBA1和HBA2)缺陷所致,其表型严重程度与功能性α-珠蛋白基因缺失数目直接相关,也受HBA突变类型影响。异体造血干细胞移植是当前输血依赖型α-地中海贫血症的唯一根治手段,但其受限于供体匮乏及移植物抗宿... α-地中海贫血由α-珠蛋白基因(HBA1和HBA2)缺陷所致,其表型严重程度与功能性α-珠蛋白基因缺失数目直接相关,也受HBA突变类型影响。异体造血干细胞移植是当前输血依赖型α-地中海贫血症的唯一根治手段,但其受限于供体匮乏及移植物抗宿主病风险高。基于自体造血干细胞的基因治疗策略为α-地中海贫血的治疗提供新思路。基因添加疗法通过慢病毒载体递送HBA2基因以回补功能性α-珠蛋白基因数量,目前我国已开展两项相关临床试验(NCT05851105和NCT05757245)。而基于基因编辑技术修复高频非缺失型致病突变可提高野生型α-珠蛋白表达水平,并减少异常蛋白产生,其中基于胞嘧啶碱基编辑器(CBE)开发的RM-004疗法在临床试验中使首例患者治疗后摆脱了输血依赖性。持续完善基因治疗策略的开发及评估将为输血依赖型α-地中海贫血患者提供新的治愈方案。 展开更多
关键词 Α-地中海贫血 α-珠蛋白基因 造血干细胞 基因治疗 单碱基编辑
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利用CRISPR/Cas9在HEK293T细胞实现γ珠蛋白上调
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作者 黄献娟 赖永榕 李静 《广西医科大学学报》 2025年第2期241-246,共6页
目的:采用CRISPR/Cas9技术编辑HEK293T细胞的γ珠蛋白启动子上调γ珠蛋白,探索基因编辑技术治疗β地中海贫血方法的可行性。方法:采用CRISPR/Cas9基因编辑技术,在γ珠蛋白转录起始位点(TSS)区前420 bp设计2条sgRNA序列,通过脂质体转染CR... 目的:采用CRISPR/Cas9技术编辑HEK293T细胞的γ珠蛋白启动子上调γ珠蛋白,探索基因编辑技术治疗β地中海贫血方法的可行性。方法:采用CRISPR/Cas9基因编辑技术,在γ珠蛋白转录起始位点(TSS)区前420 bp设计2条sgRNA序列,通过脂质体转染CRISPR/Cas9质粒诱导HEK293T细胞血红蛋白γ(HBG)基因启动子切割,经阳性克隆筛选、Sanger测序验证、TIDE分析编辑效率、RT-qPCR和western blotting检测γ珠蛋白基因表达量。结果:2条sgRNA序列均能对γ珠蛋白进行基因切割且切割活性分别为44.20%(sgRNA1)、32.90%(sgRNA2),RT-qPCR和western blotting结果显示,与对照组(NCs组,转染空载PX459质粒)相比,sgRNA2组γ珠蛋白基因表达量升高(P<0.05)。结论:CRISPR/Cas9基因编辑技术可在γ珠蛋白启动子上实现有效编辑,从而上调γ珠蛋白。 展开更多
关键词 CRISPR/Cas9编辑 Γ珠蛋白 HEK293T细胞 基因编辑
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