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诺如病毒新型GII.4流行株Sydney_2012在上海地区的检出和鉴定 被引量:14
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作者 沈震 王刚 +3 位作者 宰淑蓓 胡芸文 袁正宏 张军 《病毒学报》 CAS CSCD 北大核心 2013年第6期608-614,共7页
为了解上海地区诺如病毒相关急性胃肠炎疫情的流行病学特点及流行株基因型的演化情况,2012年3月至2013年2月,收集上海市两处哨点医院成人急性胃肠炎粪便样本进行诺如病毒的分子检测并对其基因特征进行系统分析。在502份样本中,GI群... 为了解上海地区诺如病毒相关急性胃肠炎疫情的流行病学特点及流行株基因型的演化情况,2012年3月至2013年2月,收集上海市两处哨点医院成人急性胃肠炎粪便样本进行诺如病毒的分子检测并对其基因特征进行系统分析。在502份样本中,GI群共检出19例,检出率3.78%,呈现低位流行、全年散发的状态,无明显的季节分布;GII群检出86例,检出率17.13%,在10~12月出现高位流行,并发现中老年人群GII群诺如病毒检出率显著高于青年个体(Pd0.05)。同时首次于2012年9月在上海地区检出新型GII.4变异株Sydney-2012,证实是该变异株引发了2012年秋冬季诺如病毒急性胃肠炎的高位流行。序列分析表明该变异株为GII.e型开放阅读框(Openreadingframe,ORF)1与GII.4型ORF2的重组体,目前已成为本地区的优势流行株。研究发现,2012年上海地区出现GII.4新型变异株Sydney_2012,并引发秋冬季诺如病毒急性胃肠炎的高位流行。 展开更多
关键词 gii.4流行株 Sydney_2012 上海 重组株
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我国GII.4型诺如病毒Sydney株P颗粒的表达及其组织血型抗原结合特征 被引量:2
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作者 张婷 龙艳 +2 位作者 张绪富 胡贵方 戴迎春 《中国人兽共患病学报》 CAS CSCD 北大核心 2016年第4期344-348,共5页
目的表达我国新发现GII.4型诺如病毒优势流行株—Sydney株的P颗粒,并探究其结合人类组织血型抗原(HBGAs)受体特征及变化规律。方法扩增SH 2012_05株中的P区域序列,构建进化树分析其氨基酸序列,并在原核表达系统中表达P颗粒。目的重组蛋... 目的表达我国新发现GII.4型诺如病毒优势流行株—Sydney株的P颗粒,并探究其结合人类组织血型抗原(HBGAs)受体特征及变化规律。方法扩增SH 2012_05株中的P区域序列,构建进化树分析其氨基酸序列,并在原核表达系统中表达P颗粒。目的重组蛋白经Western blot确定其特异性,并采用ELISA法检测P颗粒结合HBGAs的能力及方式。结果 SH 2012_05毒株P区域与Sydney/2012原型株同源性为99.1%,为GII.4/Sydney基因簇。SDS-PAGE电泳和Western blot分析验证SH 2012_05株P颗粒具有特异性。其结合HBGAs受体方式与以往流行的基因簇一致,即与A、B、O、AB型分泌型唾液均能结合,其中与B型抗原亲和力最高。结论成功表达了我国新发现GII.4型诺如病毒Sydney株的P颗粒,明确了Sydney株能结合分泌型HBGAs受体的特征。本研究为诺如病毒疫苗株选择提供了技术储备,这将为GII.4型诺如病毒的预防和控制提供科学基础。 展开更多
关键词 诺如病毒 gii.4 Sydeny株 P颗粒 人类组织血型抗原
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Current status and emerging challenges in the treatment of hepatitis C virus genotypes 4 to 6 被引量:3
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作者 Vasilios Papastergiou Stylianos Karatapanis 《World Journal of Clinical Cases》 SCIE 2015年第3期210-220,共11页
Hepatitis C virus(HCV) genotypes 4, 5 and 6 are mainly present in Africa, the Middle East and Asia and they have been less extensively studied with respect to epidemiology, natural disease history and therapeutic endp... Hepatitis C virus(HCV) genotypes 4, 5 and 6 are mainly present in Africa, the Middle East and Asia and they have been less extensively studied with respect to epidemiology, natural disease history and therapeutic endpoints. Response rates to a 48-wk combined peginterferon/ribavirin treatment range to 40%-69% for HCV 4, 55%-60% for HCV 5 and 60%-90% for HCV 6. Response-guided schedules are recommended to optimize the outcomes of peginterferon/ribavirin treatment in HCV 4 and, in form of preliminarydata, for HCV 6, but no data are yet available to support such an individualization of therapy for HCV 5. Recently, the direct-acting antivirals(DAAs) with pan-genotypic activities simeprevir, sofosbuvir and daclatasvir have been recommended in triple regimens with peginterferon/ribavirin for the treatment of HCV genotypes 4 to 6 infections. In the future, DAA-based interferon-free therapies are awaited to drastically improve treatment outcomes in HCV. However, efforts to improve treatment outcomes with peginterferon/ribavirin should continue, as the HCV 4-6 infected population is mainly based in resource-limited settings with restricted access to the costly DAAs. 展开更多
关键词 Hepatitis C virus genotype 4 genotype 5 genotype 6 Pegylated INTERFERON RIBAVIRIN Directacting ANTIVIRALS
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基于GII.4型诺如病毒P蛋白的GII型广谱单克隆抗体制备及应用 被引量:3
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作者 高珺珊 薛亮 +4 位作者 蔡伟程 廖颖茵 左月婷 张菊梅 吴清平 《病毒学报》 CAS CSCD 北大核心 2021年第6期1317-1325,共9页
人源诺如病毒(Human noroviruses,HuNoVs)是全球引起急性胃肠炎的重要传染病原。该病毒遗传多样性丰富,包括了5个基因群以及39种基因型,免疫学检测受限。因此,本研究旨在制备广谱性的HuNoV单克隆抗体,并建立可检测多种基因型的双抗体夹... 人源诺如病毒(Human noroviruses,HuNoVs)是全球引起急性胃肠炎的重要传染病原。该病毒遗传多样性丰富,包括了5个基因群以及39种基因型,免疫学检测受限。因此,本研究旨在制备广谱性的HuNoV单克隆抗体,并建立可检测多种基因型的双抗体夹心ELISA方法。本研究通过表达纯化流行毒株GII.4型HuNoVs衣壳蛋白P颗粒免疫Balb/c小鼠,筛选出3株能稳定分泌单克隆抗体的杂交瘤细胞株,制备单克隆抗体并进行评价。利用辣根过氧化物酶对抗体进行标记及配对筛选,建立了HuNoVs双抗夹心ELISA检测方法,并进行验证。结果显示:B10、1D6、1C1细胞株可分泌广谱性单克隆抗体。所建立的双抗夹心ELISA方法酶标抗体最佳工作浓度为1∶5 000,捕获抗体最佳包被浓度为2.0μg/mL,该方法检测GII.4型P颗粒最低检出限为125.0ng/mL,对常见HuNoVs GII.2、GII.3、GII.4、GII.6、GII.17基因型样本均能检出,而与轮状病毒、星状病毒、肠道病毒、札幌病毒无交叉反应。批间与批内重复变异系数均小于7%。临床样本检测结果显示,本方法与荧光定量RT-PCR结果的符合率为84%。本研究成功制备了广谱性的HuNoVs衣壳蛋白单克隆抗体,建立了可应用于HuNoVs流行毒株基因型的双抗夹心ELISA检测方法,为HuNoVs的诊断及流行病学调查提供了一种简便、特异的免疫学方法。 展开更多
关键词 人源诺如病毒 gii.4 单克隆抗体 双抗夹心ELISA 检测方法
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Vitamin D deficiency: Correlation to interleukin-17, interleukin-23 and PⅢNP in hepatitis C virus genotype 4 被引量:12
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作者 Mona F Schaalan Waleed A Mohamed Hesham H Amin 《World Journal of Gastroenterology》 SCIE CAS CSCD 2012年第28期3738-3744,共7页
AIM: To assess vitamin D (Vit D) abnormalities in hepatitis C infected patients and their relationship with interleukin (IL)-17, IL-23 and N-terminal propeptide of type Ⅲ pro-collagen (PⅢNP) as immune response media... AIM: To assess vitamin D (Vit D) abnormalities in hepatitis C infected patients and their relationship with interleukin (IL)-17, IL-23 and N-terminal propeptide of type Ⅲ pro-collagen (PⅢNP) as immune response mediators. METHODS: The study was conducted on 50 Egyptian patients (36 male, 14 female) with hepatitis C virus (HCV) infection, who visited the Hepatology Outpatient Clinic in the Endemic Disease Hospital at Cairo University. Patients were compared with 25 ageand sexmatched healthy individuals. Inclusion criteria were based on a history of liver disease with HCV genotype 4 (HCV-4) infection (as new patients or under followup). Based on ultrasonography, patients were classified into four subgroups; 14 with bright hepatomegaly; 11 with perihepatic fibrosis; 11 with hepatic cirrhosis; and 14 with cirrhosis and hepatocellular carcinoma (HCC).Total Vit D (i.e., 25-OH-Vit D) and active Vit D [i.e., 1,25-(OH) 2 -Vit D] assays were carried out using commercial kits. IL-17, IL-23 and PⅢNP levels were assayed using enzyme linked immunosorbent assay kits, while HCV virus was measured by quantitative and qualitative polymerase chain reaction. RESULTS: Levels of Vit D and its active form were significantly lower in advanced liver disease (hepatic cirrhosis and/or carcinoma) patients, compared to those with bright hepatomegaly and perihepatic fibrosis. IL-17, IL-23 and PⅢNP levels were markedly increased in HCV patients and correlated with the progression of hepatic damage. The decrease in Vit D and active Vit D was concomitant with an increase in viral load, as well as levels of IL-17, IL-23 and PⅢNP among all subgroups of HCV-infected patients, compared to normal healthy controls. A significant negative correlation was evident between active Vit D and each of IL-17, IL-23 and PⅢNP (r = -0.679, -0.801 and -0.920 at P < 0.001, respectively). HCV-infected men and women showed no differences with respect to Vit D levels. The viral load was negatively correlated with Vit D and active Vit D (r = -0.084 and -0.846 at P < 0.001, respectively), and positively correlated with IL-17, IL-23 and PⅢNP (r = 0.951, 0.922 and 0.94 at P < 0.001, respectively). Whether the deficiency in Vit D was related to HCVinduced chronic liver disease or was a predisposing factor for a higher viral load remains to be elucidated. CONCLUSION: The negative correlations between Vit D and IL-17, IL-23 and PⅢNP highlight their involvement in the immune response in patients with HCV-4related liver diseases in Egypt. 展开更多
关键词 Vitamin D INTERLEUKIN-17 INTERLEUKIN-23 N-terminal propeptide of type pro-collagen Hepatitis genotype 4
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Treatment of hepatitis C virus genotype 4 with peginterferon alfa-2a: Impact of bilharziasis and fibrosis stage 被引量:3
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作者 MF Derbala SR Al Kaabi +7 位作者 NZ El Dweik F Pasic MT Butt R Yakoob A Al-Marri AM Amer N Morad A Bener 《World Journal of Gastroenterology》 SCIE CAS CSCD 2006年第35期5692-5698,共7页
AIM: To evaluate pegylated interferon alpha2a (PegIFN-α2a) in Egyptian patients with HCV genotype 4, and the impact of pretreatment viral load, co-existent bilharziasis and histological liver changes on response r... AIM: To evaluate pegylated interferon alpha2a (PegIFN-α2a) in Egyptian patients with HCV genotype 4, and the impact of pretreatment viral load, co-existent bilharziasis and histological liver changes on response rate. METHODS: A total of 73 nafve patients (61 with history of bilharziasis) with compensated chronic HCV genotype 4 were enrolled into: group A (38 patients) who received 180 mg PegIFN-alpha2a subcutaneously once weekly for a year and group B (35 patients) received IFN alpha-2a 3 MU 3 times weekly. Ribavirin was added to each regimen at a dose of 1200 mg. Patients were followed for 72 wk and sustained response was assessed. RESULTS: Significant improvement in both end of treatment response (ETR) (P 〈 0.002) and sustained response (SR) (P 〈 0.05) was noted with pegylated interferon, where ETR was achieved in 29 (76.3%) and 14 patients (40%) in both groups respectively, and 25 patients in group A (65.8%) and 9 (25.7%) in group B could retain negative viraemia by the end of follow up period. Sustained virological response (SVR) showed a significant negative correlation with age and positive correlation with pretreatment inflammation in patients receiving PegIFN. Viral clearance after 3 mo of therapy was associated with high incidence of ETR and SR (P 〈 0.001), but without significant difference between both forms of interferon. Significant improvement in response was achieved in patients with high grade fibrosis (grade 3 and 4) with PegIFN-α2a, where SR was seen in 5 out of 13 patients in group A, but none in group B. There was no significant difference in response between bilharzial and non-bilharzial patients in both groups. In terms of safety and tolerability, neutropenia was the predominant side effect, both drugs were comparable. CONCLUSION: PegIFN-~2a combined with ribavirin results in improvement in sustained response in HCV genotype 4, irrespective of history of bilharzial infestation. 展开更多
关键词 Hepatitis C virus genotype 4 PEGASYS BILHARZIASIS
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中国两株罕见G9P[4]⁃N1基因型轮状病毒重配株全基因组序列分析 被引量:1
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作者 唐晓苹 范佳欣 +11 位作者 熊光萍 魏宇航 董梦洁 车如意 张无敌 李楚楚 沙比热木·托合塔木 王宏 章青 孔翔羽 庞立丽 李丹地 《病毒学报》 北大核心 2025年第2期462-472,共11页
为研究中国两株罕见G9P[4]-N1型RVA重配株的全基因组特征,采用逆转录-聚合酶链式反应(RT-PCR)方法,对2022年收集的两份G9P[4]-N1型RVA标本进行全基因组扩增。应用MEGA11.0、Geneious Prime2023.2.1、Geneious9.0.2和DNASTAR等软件对RVA... 为研究中国两株罕见G9P[4]-N1型RVA重配株的全基因组特征,采用逆转录-聚合酶链式反应(RT-PCR)方法,对2022年收集的两份G9P[4]-N1型RVA标本进行全基因组扩增。应用MEGA11.0、Geneious Prime2023.2.1、Geneious9.0.2和DNASTAR等软件对RVA毒株进行全序列及遗传变异和进化分析,成功获取两株G9P[4]-N1型RVA的全基因组序列。结果显示两株RVA毒株的全基因组基因型均为G9-P[4]-I2-R2-C2-M2-A2-N1-T2-E2-H2,两株RVA毒株所有节段核苷酸序列的相似性为:98.5%~99.5%。系统进化树显示VP7、VP4和NSP2基因分别为G9-Ⅲ、P[4]-Ⅴ、NSP2-N1。中国两株G9P[4]型RVA毒株为罕见的G9-P[4]-I2-R2-C2-M2-A2-N1-T2-E2-H2型,VP7、VP4、NSP2等关键基因节段与美国、俄罗斯、捷克等国外G9P[4]型RVA相似度高,且与本国G9型流行株亲缘关系相对较远,推测该罕见G9P[4]-N1型RVA重配株可能由境外输入。中国两株G9P[4]基因型JS97、XJ1109毒株与疫苗株RotaTeq^(TM)(G1~G4、P[8])和疫苗株Rotarix^(TM)、疫苗Rotavac原始株116E及LLR原始毒株核苷酸相似性为81.2%~91.3%,在关键中和抗原表位存在较多氨基酸位点差异,该差异是否会影响疫苗针对中国G9P[4]-N1基因型的保护效果需要进一步研究。 展开更多
关键词 轮状病毒 基因型 分子特征 全基因组
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Interleukin-28 and hepatitis C virus genotype-4:Treatment-induced clearance and liver fibrosis 被引量:2
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作者 Moutaz Derbala Nasser Rizk +8 位作者 Fatima Shebl Saad Alkaabi Nazeeh Eldweik Anil John Manik Sharma Rafie Yaqoob Muneera Almohanadi Mohammed Butt Khaled Alejji 《World Journal of Gastroenterology》 SCIE CAS CSCD 2012年第47期7003-7008,共6页
AIM:To investigate the association between interleukin-28B(IL28B) genotype and response to treatment and hepatic fibrosis in patients with hepatitis C virus(HCV) genotype 4.METHODS:Two hundred and one HCV-genotype 4 p... AIM:To investigate the association between interleukin-28B(IL28B) genotype and response to treatment and hepatic fibrosis in patients with hepatitis C virus(HCV) genotype 4.METHODS:Two hundred and one HCV-genotype 4 patients were included.All patients were treated with Peginterferon alph2a/Ribavirin for 48 wk.End of treatment response(ETR) was defined as loss of detectable serum HCV RNA at the end of treatment.Sustained viral response(SVR) was defined as loss of detectable serum HCV RNA at the end of 24 wk follow up.Genotyping of IL28B rs12979860 was performed using the TaqMan assay.We used logistic regression to estimate the adjusted odds ratio(aOR) and 95%CI.RESULTS:The study included 201 HCV-genotype 4 patients.The majority of patients were men(89.6%),with a median age of 47 years,inter-quartile range(40-51).Approximately 62.5% of patients had ETR,and 49.6% had SVR.Individuals who achieved SVR were more likely to be younger(χ 2 = 4.91,P = 0.027),and less likely to have fibrosis(χ 2 = 15.54,P < 0.0001),or inflammation(χ 2 = 7.58,P = 0.006).The genotype distribution of rs12979860 was 36.2%,49.0% and 14.8% for genotypes CC,CT,and TT,respectively.In these participants,rs12979860 genotype distribution did not differ by gender(P = 0.466),pretreatment viral load(P = 0.600),inflammation(P = 0.435),or fibrosis(P = 0.291).The frequencies of IL28B rs12979860 genotypes were TT(14.8%),CT(49.0%),and CC(36.2%).Compared to rs12979860 genotype TT,aORs(95%CI) for ETR and SVR were:CC genotype,[17.55(5.34-57.69) and 5.92(2.09-16.76),respectively];CT genotype,[5.15(1.80-14.78) and 2.48(0.94-6.52),respectively].In the current study,the patients who did not achieve ETR or SVR had a lower prevalence of rs12979860 CC(17.4% and 23.3%,respectively) than individuals who had ETR or SVR(47.9% and 47.2%,respectively).Individuals with rs12979860 CC genotype had approximately 6 times the odds of SVR compared to individuals with TT genotype(aOR = 5.92;95%CI:2.09-16.76).Similarly,patients with CT genotype had SVR more often than patients with TT genotype(aOR = 2.48;95%CI:0.94-6.52).Carrying at least one copy of the C allele(genotypes CT and CC) had almost 8 times the probability of ETR compared to those with genotype rs12979860 TT(aOR = 7.87;95%CI:2.84-21.82),and approximately 3 times the odds of SVR compared to those with genotype rs12979860 TT(aOR = 3.46;95%CI:1.37-8.74).In addition,data were consistent with a significant gene-dose relationship(aOR = 4.05/allele;95%CI:2.27-7.22).The association between rs12979860 genotype and SVR was similar among those who achieved and those who did not achieve SVR.CONCLUSION:In HCV-genotype 4 patients,rs12979860 is a sensitive predictor of viral clearance,independent of viral load,age,gender or fibrosis,with no similar relation to severity of fibrosis. 展开更多
关键词 genotype 4 Hepatic fibrosis Hepatitis C virus Interleukin-28B rs12979860
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表达GoAstV-2 Cap蛋白的重组FAdV-4的构建与鉴定 被引量:1
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作者 李星雨 李岩 +14 位作者 杨盼盼 刘俊杰 相梦佳 朱玉涛 邱路遥 乔麒龙 张伯顺 卜德新 韩城昊 于春梅 丛雁方 王增 李建丽 王白玉 赵军 《中国兽医学报》 北大核心 2025年第3期443-448,513,共7页
为构建表达鹅星状病毒基因2型(GoAstV-2)衣壳蛋白(Cap)的重组禽腺病毒4型(FAdV-4),本研究将GoAstV-2的Cap基因表达盒插入到含有FAdV-4感染性克隆p15A-cm-FAdV4-HNJZ中FAdV4基因组的1966 bp自然缺失区,将获得的重组感染性克隆p15A-cm-FAd... 为构建表达鹅星状病毒基因2型(GoAstV-2)衣壳蛋白(Cap)的重组禽腺病毒4型(FAdV-4),本研究将GoAstV-2的Cap基因表达盒插入到含有FAdV-4感染性克隆p15A-cm-FAdV4-HNJZ中FAdV4基因组的1966 bp自然缺失区,将获得的重组感染性克隆p15A-cm-FAdV4-HNJZ-Cap/GoAstV-2利用限制性内切酶线性化后转染鸡肝癌细胞系(chicken hepatoma cell line,LMH),拯救出表达Cap蛋白的重组病毒rFAdV4-Cap/GoAstV-2。将重组病毒在LMH细胞中连续传至第15代,提取重组病毒基因组DNA,用插入位点两侧的鉴定引物进行PCR和利用抗Cap蛋白多克隆抗体进行间接免疫荧光试验和Western blot对重组病毒进行鉴定,同时对重组病毒在LMH细胞中的复制动态进行了研究。结果显示,GoAstV-2的Cap基因能够稳定存在于重组病毒rFAdV4-Cap/GoAstV-2基因组中,而且获得稳定表达;重组病毒具有良好的体外复制能力。本研究所制备的重组病毒rFAdV4-Cap/GoAstV-2为研制防控鹅FAdV-4和GoAstV-2混合感染的新型高效二联灭活疫苗奠定了基础。 展开更多
关键词 鹅星状病毒基因2型 禽病毒4 CAP蛋白 二联灭活疫苗
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Assessment of co-segregated TLR4 genotypes among Nigerian children with asymptomatic and clinical malaria
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作者 Bamidele Abiodun Iwalokun Senapon Olusola Iwalokun +1 位作者 Bernice Enobong Udoh Modinat Balogun 《Asian Pacific Journal of Tropical Biomedicine》 SCIE CAS 2017年第2期96-102,共7页
Objective: To assess the occurrence and pattern of Toll-like receptor 4(TLR4) cosegregated genotypes among children with Plasmodium falciparum malaria in Nigeria.Methods: In this case-control study, a total of 79 Plas... Objective: To assess the occurrence and pattern of Toll-like receptor 4(TLR4) cosegregated genotypes among children with Plasmodium falciparum malaria in Nigeria.Methods: In this case-control study, a total of 79 Plasmodium falciparum infected children aged 2–7 years and 105 age-matched uninfected controls of Yoruba descents in Lagos were studied. The extracted DNA samples were used for TLR4 genotyping at codons 299(Asp > Gly) and 399(Thr > Ile) by PCR-restriction fragment length polymorphism. Malaria infection was diagnosed by blood smear microscopy and infected children were stratified into asymptomatic, uncomplicated and severe malaria sub-groups.Malnutrition was determined by measuring the mid upper arm circumference and anemia was defined as hemoglobin < 11 g/dL.Results: The proportions of children with acute malnutrition and severe anemia were12.0% and 3.2%, respectively. Parasitemia and malnutrition were not correlated and four distinct patterns of TLR4 genotypes were found in the study population: Asp299Asp/Thr399Thr(90.2%), Asp299Gly/Thr399Thr(4.3%), Gly299Gly/Thr399Thr(3.8%) and Asp299Gly/Thr399Ile(1.6%). These genotypes did not differ significantly(P > 0.05) in frequency between infected and non-infected children. However, low and high occurrences of the TLR4 Asp299Asp/Thr399 Thr and Asp299Gly/Thr399 Thr genotypes were observed in the severe malaria subgroup.Conclusions: This study reveals a protective role for TLR4 Asp299Gly/Thr399 Ile and Asp299Asp/Thr399 Thr genotypes against severe malaria in Nigerian children. 展开更多
关键词 TLR4 polymorphism TLR4 co-segregated genotypes Asymptomatic malaria Clinical malaria Nigeria
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Interferon-free treatments in patients with hepatitis C genotype 1-4 infections in a real-world setting
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作者 Huascar Ramos Pedro Linares +18 位作者 Ester Badia Isabel Martín Judith Gómez Carolina Almohalla Francisco Jorquera Sara Calvo Isidro García Pilar Conde Begona álvarez Guillermo Karpman Sara Lorenzo Visitación Gozalo Mónica Vásquez Diana Joao Marina de Benito Lourdes Ruiz Felipe Jiménez Federico Sáez-Royuela 《World Journal of Gastrointestinal Pharmacology and Therapeutics》 CAS 2017年第2期137-146,共10页
AIM To investigated the real-world effectiveness and safety of various regimens of interferon-free treatments in patients infected with hepatitis C virus(HCV).METHODS We performed an observational study to analyze dif... AIM To investigated the real-world effectiveness and safety of various regimens of interferon-free treatments in patients infected with hepatitis C virus(HCV).METHODS We performed an observational study to analyze different antiviral treatments administered to 462 HCV-infected patients, of which 56.7% had liver cirrhosis. HCV RNA after 4 wk of treatment and at 12 wk after treatment sustained virologic response(SVR) as well as serious adverse events(SAEs) was analyzed first for the whole cohort and then separately in patients who met or did not meet the inclusion criteria of a clinical trial(CT-met and CT-unmet, respectively).RESULTS The most frequently prescribed treatment was simeprevir/sofosbuvir(36.4%), followed by sofosbuvir/ledipasvir(24.9%) and ombitasvir/paritaprevir/ritonavir(r)/dasabuvir(19.9%). Ribavirin(RBV) was administered in 198 patients(42.9%). SVRs occurred in 437/462 patients(94.6%). The SVRs ranged between 93.3% and 100% for genotypes 1-4. SVRs were achieved in 96.2% patients in the CTmet group vs 91.9% patients in the CT-unmet group(P = 0.049). Undetectable HCV RNA at week 4 occurred in 72.9% of the patients. In the univariate analysis, the factors associated with SVRs were lower liver stiffness, absence of cirrhosis, higher platelet count, higher albumin levels, no RBV dose reduction, undetectable HCV RNA at week 4 and CT-met group. In the multivariate analysis, only albumin was an independent predictor of treatment failure(P = 0.04). Eleven patients(2.4%) developed SAEs; 5.2% and 0.7% of the patients in the CT-unmet and CT-met groups, respectively(P = 0.003).CONCLUSION A high proportion of patients with HCV infection achieved SVRs. For patients who did not meet the CT criteria, treatment regimens must be optimized. 展开更多
关键词 Hepatitis C virus infection genotype 1-4 Real world treatment Direct-acting antiviral agents
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Sustained virological response in a predominantly hepatitis C virus genotype 4 infected population
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作者 Yaser Dahlan Hafiz-Mughees Ather +2 位作者 Majid Al-ahmadi Faisal Batwa Waleed Al-hamoudi 《World Journal of Gastroenterology》 SCIE CAS CSCD 2009年第35期4429-4433,共5页
AIM:To assess sustained virological response(SVR) rates in a predominantly hepatitis C virus(HCV) genotype 4 infected population. METHODS:Between 2003-2007,240 patients who were treated for chronic hepatitis C infecti... AIM:To assess sustained virological response(SVR) rates in a predominantly hepatitis C virus(HCV) genotype 4 infected population. METHODS:Between 2003-2007,240 patients who were treated for chronic hepatitis C infection at our center were included.Epidemiological data,viral genotypes,and treatment outcomes were evaluated in all treated patients.Patients with chronic renal failure, previous non-responders,and those who relapsed after previous treatment were excluded from the study.Among all patients,57%were treated with PEG-interferon(IFN)α-2a and 43%patients were treated with PEG-IFNα-2b;both groups received a standard dose of ribavirin. RESULTS:89.6%of patients completed the treatment with an overall SVR rate of 58%.The SVR rate was 54%in genotype 1,44%in genotype 2,73%in genotype 3,and 59%in genotype 4 patients.There was no statistical difference in the SVR rate between patients treated with PEG-IFNα-2a and PEG-IFNα-2b (61.5%vs 53%).Patients younger than 40 years had higher SVR rates than older patients(75%vs 51%,P =0.001).SVR was also statistically significantly higher when the HCV RNA load(pretreatment)was below 800.000(64%vs 50%,P=0.023),in patients with a body mass index(BMI)less than 28(65%vs 49%,P =0.01),and in patients who completed the treatment duration(64%vs 8%,P≤0.00001).CONCLUSION:The SVR rate in our study is higher than in previous studies.Compliance with the standard duration of treatment,higher ribavirin dose,younger age,lower BMI,and low pretreatment RNA levels were associated with a higher virological response. 展开更多
关键词 Hepatitis C virus infection Sustained virological response genotype 4
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Impact of past HBV exposure on virological response to combined interferon ribavirin therapy in patients with chronic HCV genotype 4
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作者 M. Said M. S. El-Raziky +5 位作者 M. Abdel-Hamid Y. Saad M. Hashem S. Zakaria M. K. Mohamed G. Esmat 《Open Journal of Internal Medicine》 2011年第2期38-43,共6页
Aim: is to investigate if past exposure to HBV in chronic HCV infection promotes the progression of liver disease and influences Interferon (INF) response or not. Methods: 185 patients with chronic HCV were recruited ... Aim: is to investigate if past exposure to HBV in chronic HCV infection promotes the progression of liver disease and influences Interferon (INF) response or not. Methods: 185 patients with chronic HCV were recruited and randomized into 2 groups, group I was treated with PEG-IFN alfa-2b plus ribavirin and group II with 3 MU/TIW IFN alfa-2b plus ribavirin. All patients had HBsAg negative & patients had HBc Ab positive tested for HBsAb. Patients with HBc Ab (n = 37) were tested for serum HBV DNA. Pretreatment liver biopsy and Immunohistochemistry was performed for detection of HBsAg and HBcAg using monoclonal antibodies. Demographic and laboratory data were collected. Results: 70/185 (38%) patients had Anti-HBc, 37 (20%) had isolated anti-HBc and none of the 37 subjects with isolated anti-HBc had serum HBV DNA. Sustained Viral Response (SVR) was achieved in 32/70 (46%) and 46/115 (40%) in anti-HBc seropositive and seronegative patients respectively, in conventional IFN group SVR was 37% and 39% in past HBV exposed patients and unexposed respectively, in PEG IFN group SVR was 59% and 41% in past HBV exposed patients and unexposed respectively. Among anti-HBc and anti-HBs seropositive patients SVR was 10/12 [83%] and 4/21 [19%] p = 0.004 in PEG and conventional IFN respectively. Marked fibrosis was diagnosed in 20% past HBV exposed patients versus 10% in unexposed patients (p = 0.01). Conclusion: past HBV exposure promotes the progression of liver disease but has no effect on the SVR to antiviral therapy in chronic HCV genotype 4 patients. 展开更多
关键词 HCV genotype 4 PAST HBV EXPOSURE Response To INTERFERON THERAPY
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Insulin Resistance, Visceral Adiposity Index and TyG Index in Genotype-4 Chronic HCV Patients and Their Relation to Hepatic Histopathology
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作者 Eman A. Sabet Asmaa N. Mohammad +2 位作者 Laila M. Yousef Ahmed R. H. Ahmed Abeer Sheneef 《Open Journal of Gastroenterology》 2016年第10期249-264,共17页
Introduction: Hepatitis C virus (HCV) genotype 4 is the most prevalent in Egypt. Vis-ceral adiposity index (VAI) and (TyG) index are newly developed indices for assess-ment of metabolic syndrome (MS) and insulin resis... Introduction: Hepatitis C virus (HCV) genotype 4 is the most prevalent in Egypt. Vis-ceral adiposity index (VAI) and (TyG) index are newly developed indices for assess-ment of metabolic syndrome (MS) and insulin resistance (IR). We aimed at comparing their levels in HCV-patients with healthy controls and validate their use for prediction of hepatic histopathological changes. Patient and Methods: 78 chronic HCV-infected patients proven by PCR, viral genotyping and hepatic histopathology, and 67 healthy controls were enrolled. Presence of MS, Homeostasis Model Assessment for IR esti-mation (HOMA-IR), TyG index, and VAI were assessed. Results: HOMA-IR, TyG and frequency of MS were significantly higher in patients’ group (p p p = 0.002). Conclusion: HCV genotype 4 is significantly associated with MS and increased values of HOMA IR and TyG index. TyG index and VAI are valuable simple indices that could predict the histopathological changes in Egyptian CHC pa-tients. 展开更多
关键词 HCV IR TyG VAI STEATOSIS genotype 4
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The complete genomic sequence analysis of genotype 4 human astrovirus HASTVgz01 strain in Guangzhou
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作者 BING ZHU JIA YU ZHONG +5 位作者 XIAO LI YI CHEN TAO LIN ZAO HE WU RONG ZHOU SI TANG GONG 《Journal of Microbiology and Immunology》 2006年第3期173-176,共4页
To analyze the genomic molecular structure and genotype of human astrovirus isolated from infant in Guangzhou of China, the primers were designed based on the genomic sequence of astrovirus from the C, enBank and the ... To analyze the genomic molecular structure and genotype of human astrovirus isolated from infant in Guangzhou of China, the primers were designed based on the genomic sequence of astrovirus from the C, enBank and the target sequence were amplified by RT-PCR. Then the PCR-products were cloned to T vector and sequenced. The genomic nucleotide sequences were analyzed by the programs CLUSTAL W and DNASTAR. It was found that the full genomic length of HASTVgz01 strain was 6721 bp and the ORFs were 6558 bp. The 5' and 3'UTR were 82 and 81 nucleotides. The genome included 3 open reading frames (ORFs) : ORFla, ORFlb and ORF2. The 5'-terminal ORFla started at nueleotide 83 and extended to nucleotide 2845. ORFlb (nt 2785 to nt 4332) overlaped ORFla by 61 nueleotides. The 3'-terminal ORF2 began at nucleotide 4325 and terminated at nucleotide 6640. ORF2 had 2316 nucleotides. Compared with other astrovirus sequences in GenBank, the homology of the amino acid sequence of ORF2 of HASTVgz01 strain with that of serotype 4 was 93%. Homology with other serotypes ranged from 61% to 70%. The complete nucleotide sequence of astrovirus HASTVgz01 strain isolated from Guangzhou in China was 6721 bp in length, GenBank accession NO. DQ344027. Comparing the ORF2 of astrovirus HASTVgz01 with the known sequences of types 1-8 the highest homology was serotype 4 (93%). Comparative sequence analysis of the HASTVgz01 ORF2 with the reported human astrovirus sequences revealed that the isolated astrovirus belongs to genotype (serotype) 4. 展开更多
关键词 Human astrovirus Genome genotype 4 Sequence analysis
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南京地区腹泻婴幼儿新型诺如病毒GII.17变异株的检出及基因分析 被引量:8
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作者 蒋翠莲 叶莉莉 +5 位作者 许烨 顾平清 张洪英 靳淼 艾静 付建光 《中华医院感染学杂志》 CAS CSCD 北大核心 2016年第20期4717-4720,共4页
目的了解南京地区腹泻婴幼儿新型GII.17诺如病毒变异株的检出及其基因特征,为疾病预防控制及疫苗研制提供切实有力的科学依据。方法收集2015年1-6月南京市妇幼保健院疑似病毒性腹泻粪便标本178份,采用荧光定量PCR方法对标本进行诺如病... 目的了解南京地区腹泻婴幼儿新型GII.17诺如病毒变异株的检出及其基因特征,为疾病预防控制及疫苗研制提供切实有力的科学依据。方法收集2015年1-6月南京市妇幼保健院疑似病毒性腹泻粪便标本178份,采用荧光定量PCR方法对标本进行诺如病毒检测并对阳性标本进行基因分析。结果 178份粪便标本中,检出GII型诺如病毒27份,阳性率为15.2%,未检测出GI型诺如病毒,对该地区诺如病毒阳性标本进行衣壳蛋白区测序,发现27份GII标本中14株为新型GII.17变异株,8株为GII.3型,5株为GII.4-Sydney型;对其中5株GII.17变异株进行完整的衣壳蛋白VP1测序,发现其VP1区部分氨基酸已经出现了突变,而有些氨基酸位点的突变是与病毒抗原性及人群易感性密切相关。结论新型GII.17诺如病毒变异株在南京地区患病毒性腹泻的婴幼儿中检出,且检出率高于其他诺如病毒株,表明其可能已成为本地区新的诺如病毒流行变异株,考虑到其已在国内引起暴发流行,提示该毒株将会是本地区在今后重点预防控制监测的诺如病毒株。 展开更多
关键词 诺如病毒 变异株 gii.17型 基因分析
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基于颜色判定的逆转录环介导等温扩增技术检测GII型诺如病毒基因 被引量:14
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作者 罗剑鸣 吴希阳 +6 位作者 徐子乾 罗乐 聂凯 杨梦婕 曾亚岚 段招军 马学军 《病毒学报》 CAS CSCD 北大核心 2012年第2期165-171,共7页
建立了一种基于颜色判定的简单、快速和灵敏的逆转录环介导等温扩增(Reverse transcription loop-mediatedisothermal amplification,RT-LAMP)方法应用于GII型诺如病毒基因检测。针对诺如病毒RNA依赖的RNA聚合酶和衣壳蛋白基因序列(RNA-... 建立了一种基于颜色判定的简单、快速和灵敏的逆转录环介导等温扩增(Reverse transcription loop-mediatedisothermal amplification,RT-LAMP)方法应用于GII型诺如病毒基因检测。针对诺如病毒RNA依赖的RNA聚合酶和衣壳蛋白基因序列(RNA-dependant RNA polymerase and capsid protein gene)设计出6条特异引物,在等温条件下(65℃)进行扩增反应60min。在扩增前加入染料羟基萘酚蓝(HNB)作为反应指示剂,以其颜色变化作为结果判断标准,并经琼脂糖凝胶电泳验证。本文利用此技术对不同腹泻病毒进行了特异性分析,对体外转录的GII型诺如病毒RNA的梯度稀释进行了灵敏度分析,同时与逆转录PCR(RT-PCR)方法进行比较,并对93份腹泻患者粪便中的病毒核酸进行了检测。结果显示,本研究建立的RT-LAMP方法特异性高,灵敏度达到1 000拷贝/μLRNA分子水平,与常规检测RT-PCR方法相当。对临床标本的阳性检出率也与常规RT-PCR相当。由于此方法特异性强,灵敏度较高,耗时短,结果直观,因此有望用于GII型诺如病毒的现场快速检测。 展开更多
关键词 逆转录环介导等温扩增 gii型诺如病毒
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一起旅游团中急性胃肠炎的暴发与GII. 17型诺如病毒相关 被引量:6
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作者 贾立平 邓洁 钱渊 《病毒学报》 CAS CSCD 北大核心 2017年第5期767-773,共7页
为了解2016年夏季一起发生在某赴内蒙古旅游团游客中的急性胃肠炎暴发流行的病毒病原。分别采集此次胃肠炎暴发流行中两名患病游客腹泻症状发生后第3天、5天和7天的粪便标本,提取核酸后首先用荧光定量PCR扩增诺如病毒核酸进行检测,阳性... 为了解2016年夏季一起发生在某赴内蒙古旅游团游客中的急性胃肠炎暴发流行的病毒病原。分别采集此次胃肠炎暴发流行中两名患病游客腹泻症状发生后第3天、5天和7天的粪便标本,提取核酸后首先用荧光定量PCR扩增诺如病毒核酸进行检测,阳性标本分别用RT-PCR扩增病毒VP1基因和RdRp区域基因,通过基因测序和序列比对进行基因分型,构建进化树确定进化同源性。通过荧光定量PCR法检测到两名患者的粪便标本均为诺如病毒阳性,提示此次胃肠炎暴发流行的病原为诺如病毒,进一步的RT-PCR扩增病毒基因分析显示检测到的诺如病毒为GII.P17-GII.G17型;构建系统进化树分析显示本次与2014~2015年度广州、中国香港、中国台湾和日本等地的病毒亲缘关系更为接近;氨基酸序列分析显示该基因型与2014年以来流行的毒株同源性较近,与2014年之前流行的毒株相比变异较大,氨基酸变异主要出现在主要衣壳蛋白的P结构域。提示GII.P17-GII.G17型诺如病毒也是引起内蒙地区急性胃肠炎暴发流行的病毒病原。 展开更多
关键词 诺如病毒(Norovirus) 急性胃肠炎 基因分型 gii.17型
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云南登革4型病毒的鉴定及NS1和NS2a基因序列分析 被引量:11
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作者 王静林 张海林 +6 位作者 孙肖红 付士红 米竹青 龚正达 翟友刚 唐青 梁国栋 《中国人兽共患病学报》 CAS CSCD 北大核心 2008年第7期636-640,共5页
目的对1989年8月分离自云南省盈江县蚊虫的2株登革病毒进行生物学及分子特征的鉴定,明确这两株病毒的血清型及基因型。方法蚊虫用BHK21细胞和乳鼠法分离病毒,用间接免疫荧光试验、RT-PCR等方法进行鉴定,并对这两株病毒的分子生物学特征... 目的对1989年8月分离自云南省盈江县蚊虫的2株登革病毒进行生物学及分子特征的鉴定,明确这两株病毒的血清型及基因型。方法蚊虫用BHK21细胞和乳鼠法分离病毒,用间接免疫荧光试验、RT-PCR等方法进行鉴定,并对这两株病毒的分子生物学特征进行分析。结果从白纹伊蚊和达勒姆阿蚊中各分离到一株病毒,分别命名为M110和M113,这两株病毒对BHK21细胞能产生明显的细胞病变,脑内接种乳鼠4d左右导致乳鼠死亡。该病毒经血凝、血凝抑制和间接免疫荧光试验提示为黄病毒。分别用黄病毒属特异引物、登革4型病毒NS1和NS2a基因片段特异引物进行RT-PCR扩增、序列测定,证实为登革4型病毒。NS1和NS2a基因序列片段分析表明,M110和M113的NS1核苷酸序列与登革4型病毒基因Ⅰ型的H241株(Y19176)同源性最高,分别为99%、98%;NS2a基因片段与H241的核苷酸序列的同源性分别为96.5%、97.1%。结论从盈江县蚊虫分离到的M110和M113病毒为登革4型病毒基因Ⅰ型,表明云南省西部边境地区在20世纪80年代发生过登革4型病毒的流行。 展开更多
关键词 登革4型病毒 NS1 NS2a 基因型
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