To explore genetic resource of wild soybean(Glycine soia. L), RNA-seq was used to investigate cyst nematode resistance of G. soja. Root transcriptome expressions were profiled at 9, 15 and 20 d post inoculation(DPI) i...To explore genetic resource of wild soybean(Glycine soia. L), RNA-seq was used to investigate cyst nematode resistance of G. soja. Root transcriptome expressions were profiled at 9, 15 and 20 d post inoculation(DPI) in resistant and susceptible G. soja to SCN(soybean cyst nematode). A total of 1,594 differentially expressed genes(DEGs) were identified in roots infected by SCN compared with non-infected roots. In the resistant accession, 619, 65, and 8 DEGs were detected at 9, 15, and 20 DPI, respectively, while 327, 460 and 115 DEGs were detected at the same sampling point of susceptible accessions. DEGs were enriched in peroxidase gene sets which were involved in response to oxidative stress and oxidation reduction. Two gene families, ZIM transcription factor and WRKY transcription factor were enriched. WRKY transcription factor was only enriched in resistant accession. Moreover, gene expressions of 9 DEGs were validated by qRT-PCR. XLOC_023202, an unknown protein was up regulated more than 5 fold at 9 and 15 DPI in the resistant accession. These results provided an atlas of gene expressions of G. soja in response to SCN infection, and identified candidate DEGs for future research.展开更多
The circadian rhythms of apical meristem mitosis cells of the two types of soybean were investigated： wild soybeans - Glycine max （L.） Merr. （G. hispida Max.）, G. soja Sieb., and Zucc （G, ussuriensis Reg. and Ma...The circadian rhythms of apical meristem mitosis cells of the two types of soybean were investigated： wild soybeans - Glycine max （L.） Merr. （G. hispida Max.）, G. soja Sieb., and Zucc （G, ussuriensis Reg. and Maack）; and the hybrids of their homozygous forms （F6）. Representatives of the initial kinds and interspecific hybrids for reproduction were grown up in comparable conditions. Seeds of a soybean were grown up at 24℃ in Petri cups in thermostat in darkness during winter. For research of mitotic meristem cages activity the tips of roots were fixed temporal by acetoalcohol （fractional fixing） from 1 p.m. till 12 a.m., further up to 12 p.m. each 60 minutes. Acetokarmin was used for preparing the coloring. For researching of mitotic indexes, there have been analyzed from 6 up to 10 thousand cells at each stage （during each moment of time： 01 hour, 02, 03 06 ... 12, 13 ... 18 hours and further）. Within a day （day ＋ night） in cells of root apical meristem, three mitosis ＂waves＂ in each of the investigated forms with an absolute starting point of rest at 12 p.m., with precisely expressed further periodicity were found out. Each of the investigated forms misses in character of wave processes, on a degree of increase and recession of mitosis waves, on the level of mitotic indexes. Maximal mitotic activity at all the investigated forms is noted at 6 and 12 a.m. and 6 p.m.展开更多
基金supported by Science and Technology Development Program of Jilin Province (20170414009GH)Agricultural Science and Technology Innovation Project of Jilin Province (CXGC2017JQ018, CXGC2017ZY024)the United States Department of Agriculture-Agricultural Research Service
文摘To explore genetic resource of wild soybean(Glycine soia. L), RNA-seq was used to investigate cyst nematode resistance of G. soja. Root transcriptome expressions were profiled at 9, 15 and 20 d post inoculation(DPI) in resistant and susceptible G. soja to SCN(soybean cyst nematode). A total of 1,594 differentially expressed genes(DEGs) were identified in roots infected by SCN compared with non-infected roots. In the resistant accession, 619, 65, and 8 DEGs were detected at 9, 15, and 20 DPI, respectively, while 327, 460 and 115 DEGs were detected at the same sampling point of susceptible accessions. DEGs were enriched in peroxidase gene sets which were involved in response to oxidative stress and oxidation reduction. Two gene families, ZIM transcription factor and WRKY transcription factor were enriched. WRKY transcription factor was only enriched in resistant accession. Moreover, gene expressions of 9 DEGs were validated by qRT-PCR. XLOC_023202, an unknown protein was up regulated more than 5 fold at 9 and 15 DPI in the resistant accession. These results provided an atlas of gene expressions of G. soja in response to SCN infection, and identified candidate DEGs for future research.
文摘The circadian rhythms of apical meristem mitosis cells of the two types of soybean were investigated： wild soybeans - Glycine max （L.） Merr. （G. hispida Max.）, G. soja Sieb., and Zucc （G, ussuriensis Reg. and Maack）; and the hybrids of their homozygous forms （F6）. Representatives of the initial kinds and interspecific hybrids for reproduction were grown up in comparable conditions. Seeds of a soybean were grown up at 24℃ in Petri cups in thermostat in darkness during winter. For research of mitotic meristem cages activity the tips of roots were fixed temporal by acetoalcohol （fractional fixing） from 1 p.m. till 12 a.m., further up to 12 p.m. each 60 minutes. Acetokarmin was used for preparing the coloring. For researching of mitotic indexes, there have been analyzed from 6 up to 10 thousand cells at each stage （during each moment of time： 01 hour, 02, 03 06 ... 12, 13 ... 18 hours and further）. Within a day （day ＋ night） in cells of root apical meristem, three mitosis ＂waves＂ in each of the investigated forms with an absolute starting point of rest at 12 p.m., with precisely expressed further periodicity were found out. Each of the investigated forms misses in character of wave processes, on a degree of increase and recession of mitosis waves, on the level of mitotic indexes. Maximal mitotic activity at all the investigated forms is noted at 6 and 12 a.m. and 6 p.m.
