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INHIBITION OF FARNESYL PROTEIN TRANSFERASE AND P21^(RAS) MEMEBRANE ASSOCIATION BY D-LIMONENE IN HUMAN PANCREAS TUMOR CELLS IN VITRO 被引量:3
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作者 Chen Xiaoguang 1 (陈晓光),Yoshihisa Yano 2, Tadayoshi Hasuma 2, Toshiko Yoshimata 2, Wang Yinna 2 and Shuzo Otani 2 1Department of Pharmacology, Institute of Materia Medica, CAMS & PUMC, Beijing 100050 2Department of Biochemistry 《Chinese Medical Sciences Journal》 CAS CSCD 1999年第3期138-144,共7页
The monoterpene d limonene inhibit the plasma membrane associated P21 ras expression and the posttranslational isoprenylation of P21 ras , a mechanism that may contribute to its efficacy in the chemoprevent... The monoterpene d limonene inhibit the plasma membrane associated P21 ras expression and the posttranslational isoprenylation of P21 ras , a mechanism that may contribute to its efficacy in the chemoprevention and therapy of chemically induced rodent cancers and some human solid tumor cells. In the present study,the relative abilities of d limonene to inhibit membrane associated P21 ras expression in pancreas tumor cell(PaCa) was carried out with Western blotting, and the inhibition of farnesyl protein transferase (FTPase) activity during the Ras protein isoprenylation and cell proliferation were determined.Concomitantly,the effects of d limonene on P21 ras localization by immunohistochemistry and H ras oncogene expression in PaCa tumor cell line by Northern blotting were observed. The results showed that d limonene inhibited FPTase activity, thus to reduce P21H ras isoprenylation. d limonene could decrease P21 ras membrane association and increase cytosolic accumulation of P21 ras . This phenomenon was also noted when d limonene treated PaCa cells were stained immunohistochemically with anti P21 ras antibody. It is suggested that the inhibition of FPTase activity was closely related with the inhibiton of P21 ras membrane association and the alteration of P21 ras localization. Inhibition of farnesylation of P21 ras altered their intracellular localization and, hence, disrupted their biological activity,but no relationship with H ras oncogene expression was found. 展开更多
关键词 p21 ras membrane association farnesyl protein transferase d limonene
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Phylogenetic analysis of aerobic anoxygenic phototrophic bacteria and their relatives based on farnesyl pyrophosphate synthase gene 被引量:1
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作者 FENG Fuying JIAO Nianzhi +1 位作者 DU Hailian ZENG Yonghui 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2010年第5期82-89,共8页
The study aims to reveal phylogenetic and evolutionary relationship between aerobic anoxygenic phototrophic bacteria(AAnPB) and their relatives,anaerobic anoxygenic phototrophic bacteria(AnAnPB) and nonphototrophi... The study aims to reveal phylogenetic and evolutionary relationship between aerobic anoxygenic phototrophic bacteria(AAnPB) and their relatives,anaerobic anoxygenic phototrophic bacteria(AnAnPB) and nonphototrophic bacteria(NPB,which had high homology of 16S rDNA gene with AAnPB and fell into the same genus),and validate reliability and usefulness of farnesyl pyrophosphate synthase(FPPS) gene for the phylogenetic determination.FPPS genes with our modified primers and 16S rDNA genes with general primers,were amplified and sequenced or retrieved from GenBank database.In contrast to 16S rDNA gene phylogenetic tree,AAnPB were grouped into two clusters and one branch alone with no intermingling with NPB and AnAnPB in the tree constructed on FPPS.One branch of AAnPB,in both trees,was located closer to outgroup species than AnAnPB,which implicated that some AAnPB would be diverged earlier in FPPS evolutionary history than AnAnPB and NPB.Some AAnPB and NPB were closer located in both trees and this suggested that they were the closer relatives than AnAnPB.Combination codon usage in FPPS with phylogenetic analysis,the results indicates that FPPS gene and 16S rRNA gene have similar evolutionary pattern but the former seems to be more reliable and useful in determining the phylogenic and evolutionary relationship between AAnPB and their relatives.This is the first attempt to use a molecular marker beside 16S rRNA gene for studying the phylogeny of AAnPB,and the study may also be helpful in understanding the evolutionary relationship among phototrophic microbes and the trends of photosynthetic genes transfer. 展开更多
关键词 aerobic anoxygenic phototrophic bacteria farnesyl pyrophosphate synthase PHYLOGENY anaerobic anoxygenic phototrophic bacteria nonphototrophic bacteria
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Two farnesyl pyrophosphate synthases,GhFPS1–2,in Gossypium hirsutum are involved in the biosynthesis of farnesol to attract parasitoid wasps 被引量:1
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作者 ZHANG Hong HUANG Xin-zheng +4 位作者 JING Wei-xia LIU Dan-feng Khalid Hussain DHILOO HAO Zhi-min ZHANG Yong-jun 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2020年第9期2274-2285,共12页
Sesquiterpenoids play an import role in the direct or indirect defense of plants.Farnesyl pyrophosphate synthases(FPSs)catalyze the biosynthesis of farnesyl pyrophosphate,which is a key precursor of farnesol and(E)-β... Sesquiterpenoids play an import role in the direct or indirect defense of plants.Farnesyl pyrophosphate synthases(FPSs)catalyze the biosynthesis of farnesyl pyrophosphate,which is a key precursor of farnesol and(E)-β-farnesene.In the current study,two FPS genes in Gossypium hirsutum,GhFPS1 and GhFPS2,were heterologously cloned and functionally characterized in a greenhouse setting.The open reading frames for full-length GhFPS1 and GhFPS2 were each 1029 nucleotides,and encoded two proteins of 342 amino acids with molecular weights of 39.4 kDa.The deduced amino acid sequences of GhFPS1–2 showed high identity to FPSs of other plants.Quantitative real-time PCR analysis revealed that GhFPS1 and GhFPS2 were highly expressed in G.hirsutum leaves,and were upregulated in methyl jasmonate(MeJA)-,methyl salicylate(MeSA)-and aphid infestation-treated cotton plants.The recombinant proteins of either GhFPS1 or GhFPS2 plus calf intestinal alkaline phosphatase could convert geranyl diphosphate(GPP)or isopentenyl diphosphate(IPP)to one major product,farnesol.Moreover,in electrophysiological response and Y-tube olfactometer assays,farnesol showed obvious attractiveness to female Aphidius gifuensis,which is an important parasitic wasp of aphids.Our findings suggest that two GhFPSs are involved in farnesol biosynthesis and they play a crucial role in indirect defense of cotton against aphid infestation. 展开更多
关键词 Gossypium hirsutum farnesyl pyrophosphate synthase GhFPS1-2 biosynthesis of farnesol Aphidius gifuensis behavioral orientation
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Effect of Farnesyl Caffeate-Induced Apoptosis of Lung Carcinoma Cell Line from Damage to DNA
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作者 Kyu Sik Kim Akemi Umeyama +3 位作者 Toshihiro Hashimoto Hyun-Ju Cho Je-Jung Lee Masao Takei 《Pharmacology & Pharmacy》 2013年第9期689-695,共7页
Farnesyl caffeate, synthesis of propolis and polar bud excretion, has been reported to exhibit anti-allergic effects in mice. However, little is known about anti-tumor effects. In this study, we investigated the effec... Farnesyl caffeate, synthesis of propolis and polar bud excretion, has been reported to exhibit anti-allergic effects in mice. However, little is known about anti-tumor effects. In this study, we investigated the effect of Farnesyl caffeate in cell proliferation of lung carcinoma cell line (H157). Antiproliferative effect and apoptosis on H157 cell were evaluated using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide assay (MTT) and DNA fragmentation assay, respectively. Farnesyl caffeate inhibited the growth of H157 cell in dose-dependent manner. Morphological changes of nuclei by staining Hoechst 33258 and DNA fragmentation suggested that Farnesyl caffeate induced death involved in a mechanism of apoptosis. Moreover, caspase-3, caspase-7 and caspase-9 were activated by Farnesyl caffeate on H157 cell. The protein expressions of Bax and Bcl-2 were down-regulated by Farnesyl caffeate, resulting in cytochrome c release from the mitochondria. Farnesyl caffeate significantly increased the expression of p53 proteins which indicates that p53 plays a pivotal role in the initiation phase of Farnesyl caffeate-induced HepG2 cell apoptosis. These results demonstrated Farnesyl caffeate-induced apoptosis in human lung carcinoma cell line. More detailed mechanism of ?Farnesyl caffeate-induced H157 apoptosis remains to be elucidated. 展开更多
关键词 Apoptosis PROPOLIS farnesyl Caffeate DNA FRAGMENTATION LUNG Cancer
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基于肠道菌群-胆汁酸路径探讨中药调节糖代谢的研究进展 被引量:2
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作者 赵进东 余婵娟 +2 位作者 程若东 李金菊 方朝晖 《西部中医药》 2025年第3期103-107,共5页
对相关文献进行梳理,认为中药通过改善肠道菌群中的属、种等水平而调节血浆胆汁酸代谢,抑制肠与肝中的胆汁酸法尼酯X受体和G蛋白偶联的胆汁酸受体1,从而增加能量消耗,促进胰高血糖素样肽1分泌,抑制肝糖异生和促进肝糖原合成,发挥改善葡... 对相关文献进行梳理,认为中药通过改善肠道菌群中的属、种等水平而调节血浆胆汁酸代谢,抑制肠与肝中的胆汁酸法尼酯X受体和G蛋白偶联的胆汁酸受体1,从而增加能量消耗,促进胰高血糖素样肽1分泌,抑制肝糖异生和促进肝糖原合成,发挥改善葡萄糖代谢作用。黄芩、黄连、栀子、附子以及黄连解毒汤、葛根芩连汤等调节糖代谢可能是基于影响肠道菌群-胆汁酸路径而实现的。 展开更多
关键词 2型糖尿病 中药 肠道菌群 胆汁酸 胆汁酸法尼酯X受体 G蛋白偶联的胆汁酸受体1
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Effects of Overexpression of the Endogenous Farnesyl Diphosphate Synthase on the Artemisinin Content in Artemisia annua L. 被引量:34
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作者 Jun-Li Han Ben-Ye Liu +3 位作者 He-Chun Ye Hong Wang Zhen-Qlu Li Guo-Feng Li 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2006年第4期482-487,共6页
Artemisinin is a novel effective antimalarial drug extracted from the medicinal plant Artemisia annua L. Owing to the tight market and low yield of artemisinin, there is great interest in enhancing the production of a... Artemisinin is a novel effective antimalarial drug extracted from the medicinal plant Artemisia annua L. Owing to the tight market and low yield of artemisinin, there is great interest in enhancing the production of artemisinin. In the present study, farnesyi diphosphate synthase (FPS) was overexpressed in high-yield A. annua to Increase the artemisinin content. The FPS activity in transgenic A. ennue was twoto threefold greater than that In non-transgenic A. annua. The highest artemisinin content in transgenic A. annua was approximately 0.9% (dry weight), which was 34.4% higher than that in non-transgenic A. annua. The results demonstrate the regulatory role of FPS in artemisinin biosynthesis. 展开更多
关键词 Artemisia annua ARTEMISININ artemisinin content farnesyl diphosphate synthase overexpression.
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Association of farnesyl diphosphate synthase polymorphisms and response to alendronate treatment in Chinese postmenopausal women with osteoporosis 被引量:16
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作者 Liu Y Li M +10 位作者 Zhou PR Xing XP Xia WB Xu L Liu H J Zhang ZL LiaoEY Chen DC Liu J Tao TZ Wu W 《Chinese Medical Journal》 SCIE CAS CSCD 2014年第4期662-668,共7页
Background Genetic factors are important in the pathogenesis of osteoporosis,but less is known about the genetic determinants of osteoporosis treatment.We aimed to explore the association between the gene polymorphism... Background Genetic factors are important in the pathogenesis of osteoporosis,but less is known about the genetic determinants of osteoporosis treatment.We aimed to explore the association between the gene polymorphisms of key enzyme farnesyl diphosphate synthase (FDPS) in mevalonate signaling pathway of osteoclast and response to alendronate therapy in osteoporotic postmenopausal women in China.Methods The study group comprised 639 postmenopausal women aged (62.2&#177;7.0) years with osteoporosis or osteopenia who had been randomly assigned to low dose group (70 mg/2w) or standard dose group (70 mg/w) of alendronate in this 1-year study.We identified allelic variant of the FDPS gene using the polymerase chain reaction and restriction enzyme Faul.Before and after treatment,serum levels of calcium,phosphate,alkaline phosphatase (ALP),cross linked C-telopeptide of type Ⅰ collagen (β-CTX) were detected.Bone mineral density (BMD) at lumbar spine and proximal femur was measured.The association was analyzed between the polymorphisms of FDPS gene and the changes of BMD,bone turnover biomarkers after the treatment.Results The FDPS rs2297480 polymorphisms were associated with baseline BMD at femoral neck,and patients with CC genotype had significantly higher baseline femoral neck BMD ((733.6&#177;84.1) mg/cm2) than those with AC genotypes ((703.0&#177;86.9) mg/cm2) and AA genotypes ((649.8&#177;62.4) mg/cm2) (P 〈0.01).No significant difference in BMD at lumbar spine was observed among different genotypes of FDPS.The percentage change of serum ALP level was significantly lower in patients with CC genotype (-22.9%) than that in those with AC genotype (-24.1%) and AA genotype (-29.8%) of FDPS after 12 months of alendronate treatment (P 〈0.05).Neither percentage change of BMD nor β-CTX level after alendronate treatment had association with FDPS genotype.Conclusions FDPS gene was probably a candidate gene to predict femoral neck BMD at baseline.FDPS gene alleles could predict change percentage of ALP after treatment of alendronate,but possibly had no significant relationship with the responsiveness of BMD to alendronate therapy. 展开更多
关键词 farnesyl diphosphate synthase polymorphism ALENDRONATE OSTEOPOROSIS PHARMACOGENOMICS
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Shoot-Specific Down-Regulation of Protein Farnesyltransferase (α-Subunit) for Yield Protection against Drought in Canola 被引量:9
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作者 Yang Wang Michelle Beaith Maryse Chalifoux Jifeng Ying Tina Uchacz Carlene Sarvas Rebecca Griffiths Monika Kuzma Jiangxin Wan Yafan Huang 《Molecular Plant》 SCIE CAS CSCD 2009年第1期191-200,共10页
Canola (Brassica napus L.) is one of the most important oilseed crops in the world and its seed yield and quality are significantly affected by drought stress. As an innate and adaptive response to water deficit, la... Canola (Brassica napus L.) is one of the most important oilseed crops in the world and its seed yield and quality are significantly affected by drought stress. As an innate and adaptive response to water deficit, land plants avoid potential damage by rapid biosynthesis of the phytohormone abscisic acid (ABA), which triggers stomatal closure to reduce transpirational water loss. The ABA-mediated stomatal response is a dosage-dependent process; thus, one genetic engineering approach for achieving drought avoidance could be to sensitize the guard cell's responsiveness to this hormone. Recent genetic studies have pinpointed protein farnesyltransferase as a key negative regulator controlling ABA sensitivity in the guard cells. We have previously shown that down-regulation of the gene encoding Arabidopsis β-subunit of farnesyltransferase (ERA1) enhances the plant's sensitivity to ABA and drought tolerance. Although the β-subunit of famesyltransferase (AtFTA) is also implicated in ABA sensing, the effectiveness of using such a gene target for improving drought tolerance in a crop plant has not been validated. Here, we report the identification and characterization of the promoter of Arabidopsis hydroxypyruvate reductase (AtHPR1), which expresses specifically in the shoot and not in non-photosynthetic tissues such as root. The promoter region of AtHPR1 contains the core motif of the well characterized dehydration-responsive cis-acting element and we have confirmed thatAtHPR1 expression is inducible by drought stress. Conditional and specific down-regulation of FTA in canola using the AtHPR1 promoter driving an RNAi construct resulted in yield protection against drought stress in the field. Using this molecular strategy, we have made significant progress in engineering drought tolerance in this important crop species. 展开更多
关键词 ABA signaling protein farnesylation conditional promoter DROUGHT stomatal response seed yield field trial.
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A New Farnesyl Diphosphate Synthase Gene from Taxus media Rehder:Cloning,Characterization and Functional Complementation 被引量:4
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作者 Zhi-Hua Liao Min Chen +6 位作者 Yi-Fu Gong Zhu-Gang Li Kai-Jing Zuo Peng Wang Feng Tan Xiao-Fen Sun Ke-Xuan Tang 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2006年第6期692-699,共8页
Farnesyl dlphosphate synthase (FPS; EC 2.5.1.10) catalyzes the production of 15-carbon farnesyl dlphosphate which Is a branch-point Intermediate for many terpenoids. This reaction Is considered to be a ratelimiting ... Farnesyl dlphosphate synthase (FPS; EC 2.5.1.10) catalyzes the production of 15-carbon farnesyl dlphosphate which Is a branch-point Intermediate for many terpenoids. This reaction Is considered to be a ratelimiting step In terpenold biosynthesis. Here we report for the first time the cloning of a new full-length cDNA encoding farnesyl dlphosphate synthase from a gymnosperm plant species, Taxus media Rehder, designated as TmFPS1. The full-length cDNA of TmFPS1 (GenBank accession number: AY461811) was 1 464 bp with a 1 056-bp open reading frame encoding a 351-amino acid polypeptlde with a calculated molecular weight of 40.3 kDa and a theoretical pl of 5.07. Biolnformatlc analysis revealed that TmFPS1 contained all five conserved domains of prenyltransferases, and showed homology to other FPSs of plant origin. Phylogenetlc analysis showed that farnesyl dlphosphate synthases can be divided Into two groups: one of prokaryotic origin and the other of eukaryotic origin. TmFPS1 was grouped with FPSs of plant origin. Homologybased structural modeling showed that TmFPS1 had the typical spatial structure of FPS, whose most prominent structural feature Is the arrangement of 13 core helices around a large central cavity In which the catalytic reaction takes place. Our blolnformatic analysis strongly suggests that TmFPS1 is a functional gene. Southern blot analysis revealed that TmFPS1 belongs to a small FPSgene family in T. media. Northern blot analysis indicated that TmFPS1 is expressed in all tested tissues, Including the needles, stems and roots of T. media. Subsequently, functional complementatlon with TmFPS1 in a FPS-deflclent mutant yeast demonstrated that TmFPS1 did encode farnesyl dlphosphate synthase, which rescued the yeast mutant. This study will be helpful In future Investigations aiming at understanding the detailed role of FPS In terpenold biosynthesis flux control at the molecular genetic level. 展开更多
关键词 farnesyl diphosphate synthase rapid amplification of cDNA ends Taxus media yeast complementation
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FDFT1抑制巨噬细胞M1极化促进小鼠结直肠癌进展
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作者 高源 黄玉兰 +2 位作者 赵昆 时荣臣 缪洪明 《陆军军医大学学报》 北大核心 2025年第3期205-215,共11页
目的筛选出结直肠癌(colorectal cancer,CRC)细胞中抑制巨噬细胞向M1方向极化的胆固醇合成途径代谢酶相关靶点,并验证干预效果及其作用机制。方法将小鼠CRC细胞株(MC38)分为对照(si-NC)组和多个胆固醇合成途径相关代谢酶表达干扰(siRNA... 目的筛选出结直肠癌(colorectal cancer,CRC)细胞中抑制巨噬细胞向M1方向极化的胆固醇合成途径代谢酶相关靶点,并验证干预效果及其作用机制。方法将小鼠CRC细胞株(MC38)分为对照(si-NC)组和多个胆固醇合成途径相关代谢酶表达干扰(siRNA干扰相应靶点)组,RT-qPCR检测转染后MC38细胞相应干扰靶点的mRNA水平;6周龄C57BL/6雄性小鼠(体质量13~18 g)提取原代腹腔巨噬细胞,利用siRNA转染后MC38细胞的条件培养基处理巨噬细胞,RT-qPCR检测巨噬细胞中IL-1β、IL-6和TNF-α的mRNA水平以评估对其M1方向极化的影响。将MC38细胞分为对照组(OE-NC和sh-NC组)、法尼基焦磷酸转移酶1(farnesyl-diphosphate farnesyltransferase 1,FDFT1)过表达组(OE-FDFT1组)和FDFT1敲低组(sh-FDFT1组),RT-qPCR检测FDFT1的mRNA水平,Western blot检测FDFT1蛋白水平;将C57BL/6小鼠通过随机数字表法按照细胞分组方式分别构建皮下荷瘤模型(n=5)、腹腔种植转移瘤模型(n=5),对肿瘤质量进行检测;流式细胞术检测肿瘤细胞增殖和凋亡情况;Transwell实验检测肿瘤细胞迁移能力变化;将C57BL/6巨噬细胞清除鼠(氯膦酸盐脂质体悬液尾静脉注射)通过随机数字表法按照细胞分组方式构建腹腔种植转移瘤模型(n=5),对肿瘤质量进行检测。结果与si-NC组MC38细胞相比,各胆固醇合成途径相关代谢酶表达干扰组中MC38细胞对应靶点的mRNA水平显著下调(P均<0.05);与si-NC组巨噬细胞相比,FDFT1表达干扰组巨噬细胞中IL-1β、IL-6和TNF-α的mRNA水平显著上调(P均<0.05)。相比于OE-NC组MC38细胞,OE-FDFT1组MC38细胞的增殖、凋亡和迁移能力未发生显著变化;相比于sh-NC组MC38细胞,sh-FDFT1组MC38细胞的增殖、凋亡和迁移能力未发生显著变化。在野生型C57BL/6小鼠皮下荷瘤模型、腹腔种植转移瘤模型中,与OE-NC组相比,OE-FDFT1组肿瘤质量显著上调(P均<0.01);而与sh-NC组相比,sh-FDFT1组肿瘤质量显著下调(P均<0.01)。在巨噬细胞清除小鼠肿瘤模型中,与OE-NC组相比,OE-FDFT1组肿瘤质量未发生显著变化;与sh-NC组相比,sh-FDFT1组肿瘤质量未发生显著变化。结论CRC肿瘤细胞中胆固醇合成途径代谢酶FDFT1是靶向巨噬细胞的肿瘤免疫治疗潜在靶点,通过调控巨噬细胞促进肿瘤进展。 展开更多
关键词 结直肠癌 胆固醇代谢 法尼基焦磷酸转移酶1 巨噬细胞 M1极化
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Cloning and enzymology analysis of farnesyl pyrophosphate synthase gene from a superior strain of Artemisia annua L. 被引量:6
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作者 ZHAOYujun YEHechun 《Chinese Science Bulletin》 SCIE EI CAS 2003年第1期63-67,共5页
A cDNA(af1) encoding farnesyl pyrophosphate synthase AaFPS1 (FPS, EC2.5.1.1/EC2.5.1.10) from a high yield Artemisia annua strain 025 has been cloned from its cDNA library. Sequence analysis showed that the cDNA en-cod... A cDNA(af1) encoding farnesyl pyrophosphate synthase AaFPS1 (FPS, EC2.5.1.1/EC2.5.1.10) from a high yield Artemisia annua strain 025 has been cloned from its cDNA library. Sequence analysis showed that the cDNA en-coded a protein of 343 amino acid (aa) residues with mo-lecular weight of 39 kD. Deduced aa sequence of the cDNA was similar to FPS from other plants, yeast and mammals, containing 5 conserved domains found in both prenyl trans-ferase and polyprenyl synthase. The expression of the cDNA in Escherichia coli showed measurable specific activity of FPS in vitro. The enzyme was purified by ion exchange chromatography and its kinetics was measured. These re-sults would further promote the molecular regulation of ar-temisinin biosynthesis. 展开更多
关键词 黄花蒿 法尼基焦磷酸合成酶 基因克隆 酶学分析 青蒿素
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基于转录组测序的兔儿伞羽扇豆醇合成途径及关键酶基因研究 被引量:1
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作者 张京晶 许景垚 +4 位作者 单婷玉 赵历强 钟欣欣 张帅帅 吴家文 《生物学杂志》 CAS CSCD 北大核心 2024年第1期32-40,共9页
为解析兔儿伞羽扇豆醇生物合成途径,探究其关键酶基因,研究运用DNBSEQ测序平台对兔儿伞的叶、茎、根及根茎进行转录组测序,从头组装后获得了191541条Unigenes。KEGG代谢通路分析表明有961条Unigenes涉及兔儿伞羽扇豆醇生物合成途径,其中... 为解析兔儿伞羽扇豆醇生物合成途径,探究其关键酶基因,研究运用DNBSEQ测序平台对兔儿伞的叶、茎、根及根茎进行转录组测序,从头组装后获得了191541条Unigenes。KEGG代谢通路分析表明有961条Unigenes涉及兔儿伞羽扇豆醇生物合成途径,其中,395条Unigenes编码羽扇豆醇生物合成途径的17个关键酶。根与其他各组织比较,24条共有差异表达基因涉及羽扇豆醇生物合成途径,编码了法尼基焦磷酸合酶(farnesyl diphosphate synthase,FPPS)、角鲨烯合成酶(squalene synthase,SS)、角鲨烯环氧酶(squalene epoxidase,SE)等关键酶。对关键酶FPPS、SS和SE进行结构分析,发现它们均具有保守的催化结构域和底物结合结构域。研究丰富了兔儿伞植物的功能基因数据库,为进一步研究羽扇豆醇生物合成途径及其关键酶基因的功能和调控机制奠定了基础。 展开更多
关键词 兔儿伞 转录组测序 羽扇豆醇 法尼基焦磷酸合酶 角鲨烯合成酶 角鲨烯环氧酶
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金钗石斛法尼基焦磷酸合酶基因克隆及表达分析
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作者 李丹丹 肖逸飞 +3 位作者 李金玲 黄明进 罗春丽 王华磊 《分子植物育种》 CAS 北大核心 2024年第20期6675-6682,共8页
为探究金钗石斛法尼基焦磷酸合酶基因(DnFPPS)是否参与倍半萜类生物碱、萜类合成等代谢过程,根据金钗石斛转录组信息,克隆金钗石斛DnFPPS基因全长cDNA序列,采用荧光定量PCR技术检测其在石斛不同生长年限茎和叶中的相对表达水平,构建pGEX... 为探究金钗石斛法尼基焦磷酸合酶基因(DnFPPS)是否参与倍半萜类生物碱、萜类合成等代谢过程,根据金钗石斛转录组信息,克隆金钗石斛DnFPPS基因全长cDNA序列,采用荧光定量PCR技术检测其在石斛不同生长年限茎和叶中的相对表达水平,构建pGEX-6t-1-DnFPPS原核表达载体并在大肠杆菌中表达,获得金钗石斛DnFPPS基因c DNA全长序列共1044 bp核苷酸。NCBI blastx结果显示,DnFPPS基因编码的蛋白与霍山石斛来源FPPS1具有最高相似性,氨基酸一致度达98%。DnFPPS具有异戊烯基转移酶基因的5个典型保守功能域。进化树分析结果显示,DnFPPS蛋白与霍山石斛的FPPS1具有较近的遗传距离。其推导出的蛋白质序列经预测其结构与穗状蒿(Artemisia spiciformis)中FPP/GFPP合成酶的嵌合体蛋白晶体结构相似性可达到73.16%。表达水平分析发现DnFPPS基因表达与石斛碱累积呈正相关。在大肠杆菌中表达后SDS-PAGE电泳观察得到72 kD左右的目的条带,与预测的蛋白分子量相符合。该研究为DnFPPS基因功能研究奠定重要基础,为阐明金钗石斛倍半萜及倍半萜类生物碱物质生物合成途径研究提供重要理论参考。 展开更多
关键词 法尼基焦磷酸合成酶 倍半萜类生物碱 基因克隆 生物合成途径
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杜仲法呢基焦磷酸合酶EuFPS1互作蛋白筛选及分析 被引量:2
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作者 曾琴 梁青 赵丹 《植物生理学报》 CAS CSCD 北大核心 2024年第3期585-595,共11页
法呢基焦磷酸合酶(farnesyl diphosphate synthase,FPS)是杜仲胶生物合成途径中的关键酶之一,EuFPS1基因对杜仲胶积累有促进作用,但对其调控的分子机制尚不清楚。本研究采用SMART同源重组技术构建了杜仲酵母cDNA表达文库,以EuFPS1基因... 法呢基焦磷酸合酶(farnesyl diphosphate synthase,FPS)是杜仲胶生物合成途径中的关键酶之一,EuFPS1基因对杜仲胶积累有促进作用,但对其调控的分子机制尚不清楚。本研究采用SMART同源重组技术构建了杜仲酵母cDNA表达文库,以EuFPS1基因为诱饵筛选互作蛋白,经测序和BLAST比对初步筛选出41个互作蛋白。GO和KEGG分析结果显示,互作蛋白主要参与卟啉化合物代谢调控、紫外线与冷响应、叶片发育等生物进程,MEP代谢、卟啉代谢、泛素介导的蛋白质水解等代谢途径。选取3个互作蛋白(EuUFM1、EuLHC1、EuKS1)进一步验证互作关系,qRT-PCR分析发现EuFPS1与EuUFM1、EuLHC1、EuKS1基因在杜仲不同组织中均表达,其中EuFPS1与EuKS1的表达呈负相关。本研究为解析杜仲EuFPS1及其与互作蛋白的作用机制奠定了基础。 展开更多
关键词 杜仲 法呢基焦磷酸合酶 酵母双杂交 互作蛋白 基因表达
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法尼基化蛋白翻译后修饰对植物抗旱的影响
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作者 邹晓璐 刘鑫 程治军 《宁夏农林科技》 2024年第11期33-38,93,共7页
抗旱基因的发掘及其功能研究对增强作物对干旱环境的抵抗能力,培育适合在干旱、半干旱环境生长的品种具有重要意义。研究发现,一些抗旱相关的基因受到各种类型的蛋白质翻译后修饰。法尼基化是一种重要的蛋白质翻译后修饰方式,近年来,越... 抗旱基因的发掘及其功能研究对增强作物对干旱环境的抵抗能力,培育适合在干旱、半干旱环境生长的品种具有重要意义。研究发现,一些抗旱相关的基因受到各种类型的蛋白质翻译后修饰。法尼基化是一种重要的蛋白质翻译后修饰方式,近年来,越来越多的研究表明,这种修饰方式在作物抗旱中发挥着重要作用,同时对作物生长发育也有明显影响。综述了法尼基化影响植物抗旱的研究进展,对挖掘到的法尼基化修饰相关重要农艺性状的基因进行了总结,并展望了法尼基化在植物功能基因组研究中的重要作用。 展开更多
关键词 植物 法尼基化 抗旱 农艺性状 蛋白修饰
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黄草乌法呢基焦磷酸合酶基因(AvFPS)的克隆及功能验证
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作者 王雪 李国栋 +2 位作者 王宝婕 徐福荣 马晓惠 《中国中药杂志》 CAS CSCD 北大核心 2024年第16期4387-4395,共9页
黄草乌为云南的道地药材,其富含滇乌碱等二萜生物碱,二萜生物碱是其主要活性成分。法呢基焦磷酸合酶(FPS)是萜类生物合成途径中的一个关键酶,在二萜生物碱生物合成中发挥重要作用,其功能研究有助于揭示二萜生物碱合成的分子机制。该研... 黄草乌为云南的道地药材,其富含滇乌碱等二萜生物碱,二萜生物碱是其主要活性成分。法呢基焦磷酸合酶(FPS)是萜类生物合成途径中的一个关键酶,在二萜生物碱生物合成中发挥重要作用,其功能研究有助于揭示二萜生物碱合成的分子机制。该研究基于黄草乌转录组数据,筛选到1条FPS基因(AvFPS),克隆其全长序列并进行了生物信息学分析、功能验证以及基因表达分析。AvFPS开放阅读框(ORF)为1056 bp,编码351个氨基酸,相对分子质量约为41 kDa,其具有异戊烯基转移酶的2个典型保守功能域“DDIMD”和“DDYXD”。在大肠杆菌中表达AvFPS重组蛋白,用纯化重组蛋白进行体外酶促反应,结果表明,AvFPS能够催化法呢基焦磷酸(farnesyl pyrophosphate,FPP)的合成。qRT-PCR分析结果表明,AvFPS基因在黄草乌根、茎、叶和花中均有表达,在根中表达量最高;经MeJA诱导后,AvFPS的表达量明显上调。该研究明确了AvFPS的催化功能,揭示了AvFPS在不同组织以及经MeJA诱导不同时间段的表达模式,为更深入了解FPS基因在二萜类成分生物合成途径中的功能提供了参考。 展开更多
关键词 黄草乌 法呢基焦磷酸合酶 功能验证 表达分析
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油茶种子法尼基焦磷酸酶基因的克隆与表达模式分析
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作者 代忠迪 李思颖 丁健 《经济林研究》 北大核心 2024年第4期34-40,共7页
【目的】解析油茶CoFPPS基因的生物学特征和功能,及其在油茶种子角鲨烯合成过程中的作用机制。【方法】以高角鲨烯油茶品系‘WBL’为材料,利用转录组测序、qRT-PCR和气相色谱串联质谱等分析方法,挖掘油茶CoFPPS基因,通过基因克隆、生物... 【目的】解析油茶CoFPPS基因的生物学特征和功能,及其在油茶种子角鲨烯合成过程中的作用机制。【方法】以高角鲨烯油茶品系‘WBL’为材料,利用转录组测序、qRT-PCR和气相色谱串联质谱等分析方法,挖掘油茶CoFPPS基因,通过基因克隆、生物信息学分析、基因表达量分析和角鲨烯含量测定,解析CoFPPS基因的理化性质及其表达对种子角鲨烯含量的影响。【结果】油茶CoFPPS基因与NCBI数据库中茶FPPS1基因(XM_028249399.1)同源相似性达99.13%,CoFPPS开放阅读框为1029 bp,编码342个氨基酸,其蛋白相对分子质量为39332.14 Da,为酸性稳定蛋白质,肽链中无明显跨膜区;定位于细胞质,无信号肽;蛋白质高级结构以α-螺旋为主(222个,占64.91%),其三级结构的序列相似值为82.94%,QMEANDisCo Global值为0.81±0.05。油茶CoFPPS蛋白与中华猕猴桃、喜马拉雅凤仙花、香叶天竺葵、胡桃、花生和大豆的同源蛋白具有较高的相似性,且均属于Isoprenoid-Biosyn-C1超家族;油茶CoFPPS蛋白与狭叶油茶、朱红大杜鹃、羊踯躅、杜鹃、越橘、三七和竹节参的FPPS蛋白处于同一分支。qRT-PCR分析结果表明,高角鲨烯油茶品系发育期间种仁CoFPPS基因表达量呈现上升趋势,且与角鲨烯含量变化规律相似。【结论】油茶CoFPPS为类异戊二烯生物合成酶,与其他物种的FPPS蛋白可能具有相似的生物学功能,而且CoFPPS基因表达与油茶种子角鲨烯合成密切相关。 展开更多
关键词 法尼基焦磷酸酶 角鲨烯 油茶 基因克隆 基因表达分析
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刺五加法尼基焦磷酸合酶基因的克隆、生物信息学及表达分析 被引量:25
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作者 邢朝斌 龙月红 +2 位作者 何闪 梁能松 李宝财 《中国中药杂志》 CAS CSCD 北大核心 2012年第12期1725-1730,共6页
目的:克隆刺五加的法尼基焦磷酸合酶(farnesyl diphosphate synthase,FPS)基因,并对其进行生物信息学和表达分析。方法:采用cDNA末端快速扩增(rapid amplification of cDNA ends,RACE)技术克隆刺五加FPS基因的全长cDNA序列。运用生物信... 目的:克隆刺五加的法尼基焦磷酸合酶(farnesyl diphosphate synthase,FPS)基因,并对其进行生物信息学和表达分析。方法:采用cDNA末端快速扩增(rapid amplification of cDNA ends,RACE)技术克隆刺五加FPS基因的全长cDNA序列。运用生物信息学方法对该基因进行分析,预测其编码蛋白的结构与功能。并通过RT-PCR法检测FPS在不同器官中的表达情况。结果:刺五加FPS基因的cDNA全长为1 499 bp,开放阅读框长1 029 bp,编码342个氨基酸的蛋白,包含2个富含天冬氨酸(DDXXD)的保守功能域。FPS蛋白无跨膜区域,定位于细胞质中。RT-PCR的结果显示,刺五加FPS基因在各器官中均有表达,但表达量具有显著差异(P<0.05)。结论:首次分离并报道了刺五加FPS的cDNA克隆,并证实其在不同器官中的表达量不同,为进一步研究FPS对刺五加皂苷合成的影响和表达调控奠定了基础。 展开更多
关键词 刺五加 法尼基焦磷酸合酶 克隆 表达分析
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杜仲胶合成相关基因EuFPS的克隆及序列分析 被引量:12
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作者 周明兵 肖月华 +2 位作者 朱冬雪 裴炎 赵德刚 《分子植物育种》 CAS CSCD 2003年第1期66-71,共6页
本文采用逆转录—聚合酶链式反应 (RT PCR)方法 ,以杜仲树叶总RNA为模板扩增出杜仲法呢基焦磷酸合酶基因EuFPS ,克隆至质粒 pUCm T中。序列分析表明 ,所克隆的cDNA序列全长 12 71bp ,开放阅读框共编码 32 0个氨基酸残基 ,其核酸序列与... 本文采用逆转录—聚合酶链式反应 (RT PCR)方法 ,以杜仲树叶总RNA为模板扩增出杜仲法呢基焦磷酸合酶基因EuFPS ,克隆至质粒 pUCm T中。序列分析表明 ,所克隆的cDNA序列全长 12 71bp ,开放阅读框共编码 32 0个氨基酸残基 ,其核酸序列与拟南芥菜、银胶菊和巴西橡胶树FPP合酶的序列同源性分别为 81% ,87% ,82 %。 展开更多
关键词 杜仲胶 合成基因 EuFPS 基因克隆 序列分析 RT-PCR 法呢基焦磷酸合酶
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罗汉果法呢基焦磷酸合成酶基因的克隆及其序列分析 被引量:13
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作者 蒙姣荣 陈本勇 +2 位作者 黎起秦 李惠 陈保善 《中草药》 CAS CSCD 北大核心 2011年第12期2512-2517,共6页
目的对罗汉果甜苷V生物合成途径的关键酶法呢基焦磷酸合成酶(Farnesyl pyrophosphate synthase,FPPS)基因的全长cDNA序列进行克隆,为研究罗汉果甜苷V生物合成与基因调控奠定基础。方法根据植物FPPS基因保守功能域设计简并引物,通过PCR和... 目的对罗汉果甜苷V生物合成途径的关键酶法呢基焦磷酸合成酶(Farnesyl pyrophosphate synthase,FPPS)基因的全长cDNA序列进行克隆,为研究罗汉果甜苷V生物合成与基因调控奠定基础。方法根据植物FPPS基因保守功能域设计简并引物,通过PCR和RACE方法克隆罗汉果FPPS基因的全长cDNA。结果获得罗汉果FPPS(SgFPPS)基因的全长cDNA序列共1 354个核苷酸,包含一个1 026核苷酸的开放阅读框架(open reading frame,ORF),cDNA编码的蛋白包含342个氨基酸,推断蛋白质相对分子质量为3.92×104。NCBI Blastx结果显示,SgFPPS基因编码的蛋白与苹果树来源FPPS具有最高同源性,氨基酸一致度达85.1%。SgFPPS具有异戊烯基转移酶的5个典型保守功能域。进化树分析结果显示,SgFPPS基因与苹果树的FPPS具有较近的亲缘关系。结论首次克隆SgFPPS基因的全长cDNA序列,为分析SgFPPS基因表达特性及其在罗汉果甜苷V生物合成中的功能奠定基础。 展开更多
关键词 法呢基焦磷酸合成酶 罗汉果甜苷V 生物合成 基因克隆 序列分析
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