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Transcriptomic analysis uncovers the red leaf coloration mechanism in Euonymus sacrosancta Koidz
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作者 Xinyan Gao Zhongjia Yuan +5 位作者 Haoda Liu Yang Liu Ying Wang Lianfeng Xu Huihui Zhang Xuemei Liu 《Journal of Forestry Research》 2025年第5期245-259,共15页
Two leaf color variants red-leaf(R-type)and common-leaf(G-type)of Euonymus sacrosancta Koidz.,were employed as experimental materials to elucidate the molecular mechanisms underlying chromatic transition.Physiological... Two leaf color variants red-leaf(R-type)and common-leaf(G-type)of Euonymus sacrosancta Koidz.,were employed as experimental materials to elucidate the molecular mechanisms underlying chromatic transition.Physiological profiling identified anthocyanins and flavo-noids as the predominant pigments responsible for the red foliar phenotype,which exhibited reduced chlorophyll and carotenoid accumulation but elevated soluble sugars and proteins.Comparative transcriptomic analysis revealed that differentially expressed genes(DEGs)between R-type and G-type were significantly enriched in flavonoid biosynthe-sis and carotenoid metabolism pathways.The up-regulation of 22 key genes of anthocyanin synthesis(e.g.,CHS,CHI,LAR,LDOX and UFGT)in R-type may lead to the phenotype of red leaves through the increase of anthocyanin accumula-tion.The downregulated expression of 13 carotenoid syn-thesis-related genes(e.g.,PSY,PDS and VDE)and 6 carot-enoid degradation genes(e.g.,ABA2,CYP707A and NCED)may lead to lower carotenoid content in R-type compared to G-type.Combined with weighted gene co-expression network analysis(WGCNA),five candidate genes(EsLAR,EsLDOX,EsPDS,EsCYP707A and EsABA2)were screened from two modules highly correlated with anthocyanin con-tent in E.sacrosancta leaves.These genes may play key regulatory roles in leaf coloration and could serve as candi-date genetic resources for leaf color improvement in E.sac-rosancta.Additionally,transcription factors such as C2H2s,C3Hs,and WRKYs were identified as potential regulators in the formation of R-type in E.sacrosancta.This study pro-vides the first systematic elucidation of the transcriptional regulatory network governing red-leaf formation in E.sac-rosancta,establishing a critical theoretical foundation for molecular breeding in ornamental plants. 展开更多
关键词 Euonymus sacrosancta TRANSCRIPTOME Leaf coloration ANTHOCYANIN Carotenoids
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The pseudo-type response regulator gene Clsc regulates rind stripe coloration in watermelon
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作者 Dongming Liu Jinfang Liang +10 位作者 Quanquan Liu Yaxin Chen Shixiang Duan Dongling Sun Huayu Zhu Junling Dou Huanhuan Niu Sen Yang Shouru Sun Jianbin Hu Luming Yang 《Journal of Integrative Agriculture》 2025年第1期147-160,共14页
The color and pattern of watermelon rind are crucial external traits that directly affect consumer preferences.Watermelons with stripes having a stronger color than the background rind are ideal for studying stripe pa... The color and pattern of watermelon rind are crucial external traits that directly affect consumer preferences.Watermelons with stripes having a stronger color than the background rind are ideal for studying stripe patterns in plants,while there is still limited knowledge about the genetic mechanisms underlying stripe coloration due to the lack of germplasm resources.In this study,we focused on a watermelon germplasm with colorless stripes,and genetic analysis revealed that the trait is controlled by a single recessive gene.The gene Clsc(Citrullus lanatus stripe coloration),which is responsible for the colorless stripe,was localized into a 147.6 kb region on Chr9 by linkage analysis in a large F2 mapping population.Further analysis revealed that the Cla97C09G175170 gene encodes the APRR2 transcription factor,plays a crucial role in determining the watermelon colorless stripe phenotype and was deduced to be related to chlorophyll synthesis and chloroplast development.Physiological experiments indicated that Cla97C09G175170 may significantly influence chloroplast development and chlorophyll synthesis in watermelon.The results of this study provide a better understanding of the molecular mechanism of stripe coloration in watermelon and can be useful in the development of marker-assisted selection(MAS)for new watermelon cultivars. 展开更多
关键词 watermelon stripe coloration INHERITANCE gene mapping TRANSCRIPTOME
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Claw coloration in the fiddler crab Leptuca uruguayensis has no correlation with male quality
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作者 Zackary A.Graham Jonatas de Jesus Florentino +3 位作者 Samuel P.Smithers Joao C.T.Menezes Jose Eduardo de Carvalho Alexandre V.Palaoro 《Current Zoology》 2025年第1期109-123,共15页
Sexual selection is thought to play a major role in the evolution of color due to the correlation between a signaler’s physiological state and the displayed color.As such,researchers often investigate how color corre... Sexual selection is thought to play a major role in the evolution of color due to the correlation between a signaler’s physiological state and the displayed color.As such,researchers often investigate how color correlates to the quality of the signaler.However,research on the relationship between color and individual quality is often taxonomically limited and researchers typically investigate how color phenotypes relate to one index of quality,such as a linear measure of body size.Here,we investigated the relationship among body size,claw size,claw muscle mass,lipid content,and the color of the claw in male fiddler crabs(Leptuca uruguayensis)which wield an exaggerated claw that varies in color from brown to red.We hypothesized that if the color was correlated to one or more indices of male quality,the color displayed on the claws of male L.uruguayensis could be under sexual selection.We found L.uruguayensis claw color varies substantially among the individuals we photographed.However,we did not find a correlation between claw color and indices of quality;neither brightness nor hue correlated to the indices of quality we measured.Our findings suggest that claw color in L.uruguayensis is unlikely to have evolved to signal quality,but may instead function as a species identity or as a non-indicator sexual signal. 展开更多
关键词 animal coloration animal communication animal signals DECAPODA non-indicator sexual signal sexual selection
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Disentangling the molecular mechanisms underlying yellow body coloration in a soft-shelled turtle
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作者 Ju Zhang Zi-Han Ding +3 位作者 Peng-Fei Wu Wei-Guo Du Yue-Qiang Guan Xi-Feng Wang 《Zoological Research》 2025年第2期379-387,共9页
While the functions of body coloration have been well characterized in many animal taxa,the molecular mechanisms governing its production remain poorly understood.This study investigated the genetic and biochemical ba... While the functions of body coloration have been well characterized in many animal taxa,the molecular mechanisms governing its production remain poorly understood.This study investigated the genetic and biochemical basis of yellow body coloration in a mutant form of the Yongzhang golden soft-shelled turtle(YGT,Pelodiscus sinensis),which exhibit a striking yellow phenotype.Comparative pigment analysis revealed that YGTs have significantly lower melanin and higher carotenoid pigmentation compared to atrovirens wild-type turtles(AWTs),while pterin concentrations did not differ between the two groups.Functional validation experiments demonstrated that a single amino acid substitution(I481R)in tyrosinase-related protein 1(tyrp1)plays a pivotal role in the reduction of melanin production in YGTs.Expression of tyrp1 from YGTs and AWTs in A375 cells,in which human tyrp1(htyrp1)function was depleted by CRISPR-Cas9,led to a specific reduction in melanin production in cells expressing the YGT-tyrp1 variant.Moreover,bco1 and bco2,genes negatively associated with carotenoid content,showed reduced expression in YGTs,suggesting that yellow coloration is achieved through a reduction in melanin pigmentation combined with an accumulation of carotenoids.These findings elucidate the molecular basis of yellow body coloration in turtles and enhance our understanding of pigment regulation in vertebrates. 展开更多
关键词 Pelodiscus sinensis PIGMENTS Yellow coloration Molecular mechanisms
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Genome-Wide Identification of the APETALA2/Ethylene-Responsive Factor (AP2/ERF) Gene Family in Acer paxii and Transcriptional Expression Analysis at Different Leaf Coloration Stages
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作者 Zhong Ren Shuiming Zhang +5 位作者 Yuzhi Fei Zhu Chen Yue Zhao Xin Meng Hongfei Zhao Jie Ren 《Phyton-International Journal of Experimental Botany》 2025年第9期2927-2947,共21页
Acer paxii belongs to the evergreen species of Acer,but it exhibits a unique feature of reddish leaves in fall in subtropical regions.Although the association of AP2/ERF transcription factors with color change has bee... Acer paxii belongs to the evergreen species of Acer,but it exhibits a unique feature of reddish leaves in fall in subtropical regions.Although the association of AP2/ERF transcription factors with color change has been well-documented in prior research,molecular investigations focusing on AP2/ERF remain notably lacking in Acer paxii.This research focuses on performing an extensive genome-wide investigation to identify and characterize the AP2/ERF gene family in Acer paxii.As a result,123 ApAP2/ERFs were obtained.Phylogenetic analyses categorized the ApAP2/ERF family members into 15 subfamilies.The evolutionary traits of the ApAP2/ERFs were investigated by analyzing their chromosomal locations,conserved proteinmotifs,and gene duplication events.Moreover,investigating gene promoters revealed their potential involvement in developmental regulation,physiological processes,and stress adaptationmechanisms.Measurements of anthocyanin content revealed a notable increase in red leaves during autumn.Utilizing transcriptome data,transcriptomic profiling revealed that the majority of AP2/ERF genes in Acer paxii displayed significant differential expression between red and green leaves during the color-changing period.Furthermore,through qRT-PCR analysis,it was found that the gene expression levels of ApERF006,ApERF014,ApERF048,ApERF097,and ApERF107 were significantly elevated in red leaves.This indicates their potential participation in leaf pigmentation processes.These findings offer significant insights into the biological significance of ApAP2/ERF transcription factors and lay the groundwork for subsequent investigations into their regulatorymechanisms underlying leaf pigmentation in Acer paxii. 展开更多
关键词 AP2/ERF gene family Acer paxii transcription factor leaf color discoloration ANTHOCYANIN
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Fading on the beach:pigmentation plasticity adjusts coloration to substrate type in coastal Western spadefoot toads
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作者 Léa Lorrain-Soligon Frédéric Robin +3 位作者 Vincent Lelong Sébastien Palier Marko Jankovic and Françis Brischoux 《Current Zoology》 2025年第5期593-602,共10页
Animal species exhibit a wide range of coloration and patterns,which are under strong selection and often linked to individual quality,influencing mate choice,recognition,signaling,and interspecific interactions such ... Animal species exhibit a wide range of coloration and patterns,which are under strong selection and often linked to individual quality,influencing mate choice,recognition,signaling,and interspecific interactions such as predator avoidance.In amphibians,coloration can vary based on individual traits as well as environmental conditions,including the coloration of their environment.In this study,we described the dorsal coloration(body coloration reticulated by dark patches)in 676 Western spadefoot toads(Pelobates cultripes)from the French Atlantic coast,comparing color variations across different substrates.In addition,we assessed color change in 18 toads transferred between bright and dark substrates.We demonstrated that the dorsal coloration varies based on capture locations(beach vs.inland)and associated substrate types(bright vs.dark),suggesting background color matching.We showed more pronounced effects in females,which might reflect varying predation risks.Experimentally,we showed that individuals can rapidly adjust their coloration to match the substrate within 24 h.Rapid color changes in response to substrate type indicate significant pigmentation plasticity.Bright individuals from sandy substrates showed less dorsal background(body)color change than dark inland individuals,while patch coloration responded differently depending on the substrate of origin.These findings highlight the complex interactions between substrate type,sex,and pigmentation plasticity.These interactions have potential costs and benefits,which might be linked to melanin production,which warrant further investigation. 展开更多
关键词 AMPHIBIANS background color matching INLAND PATCHES sex-dependent substrate
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Intrapopulation variability in coloration is associated withreproductive season in the crayfsh Faxonius virilis
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作者 Lauren Mathews 《Current Zoology》 2025年第2期251-262,共12页
Animal coloration has a wide range of biological functions and may be subject to different,sometimes conficting,selective pressures.In crustaceans,the evolution of coloration is relatively unstudied,despite the broad ... Animal coloration has a wide range of biological functions and may be subject to different,sometimes conficting,selective pressures.In crustaceans,the evolution of coloration is relatively unstudied,despite the broad range of colors and color patterns,which includes variability at multiple levels.Freshwater crayfsh are known to show color variability within species and populations,as well as intra-individual variability,but thefunction,if any,of crayfsh coloration is largely unknown.Here,I report on an experiment to understand patterns of color variability in the crayfsh Faxonius virilis and show that variation is strongly correlated to ontogenetic changes from a summer non-reproductive form to a fall reproductiveform.Crayfsh showed comparatively little inter-and intra-individual color variation in their non-reproductive form,but substantial variation at bothlevels in the reproductive form.Transition to the reproductive form was associated with the development of greener or bluer coloration localizedto the chelae on a subset of individuals,but these changes showed no clear correlation with sex or body size.Future investigations should focuson determining whether differences in color between individuals in the mating season are associated with any physiological or behavioral differences,or with differential susceptibility to predation. 展开更多
关键词 crayfsh color variation reproductive form seasonal changes
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Ultra-thin dual color rendering mechanism structural coloration film with freeze-resistant and self-cleaning properties
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作者 Xi-Di Sun Hao Li +6 位作者 Hui-Wen Yu Xin Guo Fan-Yu Wang Jia-Han Zhang Jing Wu Yi Shi Li-Jia Pan 《Rare Metals》 2025年第3期1813-1823,共11页
Localized manipulation of light interference and phase through surface microstructures provides new viable technologies for applications such as anti-counterfeiting,camouflage,high-density optical storage and display.... Localized manipulation of light interference and phase through surface microstructures provides new viable technologies for applications such as anti-counterfeiting,camouflage,high-density optical storage and display.However,the single-color rendering mechanism and the material’s intrinsic properties,such as hydrophilicity,low hardness and low melting point,limit the range of applications.In this paper,we propose a structural color based on ultrathin ZrO_(2)thin films,which presents a visible full-spectrum color display.The structural color coating has ultrahigh flame retardancy,super UV resistance,super surface hardness and resistance to acid and alkali corrosion.The use of two different color development mechanisms realizes the hiding of the quick response(QR)code in visible light.The modified film exhibits superhydrophobic properties,unique anti-icing and self-cleaning properties,and shows the material’s potential for camouflage,anti-counterfeiting,military,marine and aerospace applications. 展开更多
关键词 Structural color ZrO_(2) Anodization Freezing resistance Surface morphologies
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Influence of ambient water coloration on habitat and conspecific choice in the female Lake Malawi cichlid, Metriaclima zebra
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作者 Noori Choj Nicolas Mathevon +1 位作者 Eileen A.Hebets Marilyn Beauchaud 《Current Zoology》 SCIE CAS CSCD 2024年第2期214-224,共11页
Female cichlid fish living in African great lakes are known to have sensory systems that are adapted to ambient light environments.These sen-sory system adaptations are hypothesized to have influenced the evolution of... Female cichlid fish living in African great lakes are known to have sensory systems that are adapted to ambient light environments.These sen-sory system adaptations are hypothesized to have influenced the evolution of the diverse male nuptial coloration.In rock-dwelling Lake Malawi mbuna cichlids,however,the extent to which ambient light environments influence female sensory systems and potentially associated male nuptial coloration remains unknown.Yet,the ubiquitous blue flank coloration and UV reflection of male mbuna cichlids suggest the potential impacts of the blue-shifted ambient light environment on these cichlid's visual perception and male nuptial coloration in the shallow water depth in Lake Malawi.In the present study,we explored whether and how the sensory bias of females influences intersexual communication in the mbuna cichlid,Metriaclima zebra.A series of choice experiments in various light environments showed that M.zebra females (1)have a pref-erence for the blue-shifted light environment,(2)prefer to interact with males in blue-shifted light environments,(3)do not show a preference between dominant and subordinate males in full-spectrum,long-wavelength filtered,and short-wavelength filtered light environments,and (4)show a"reversed"preference for subordinate males in the UV-filtered light environment.These results suggest that the visual perception of M.zebra females may be biased to the ambient light spectra in their natural habitat by local adaptation and that this sensory bias may influence the evolution of blueand UV reflectivepatterns in male nuptial coloration. 展开更多
关键词 ambient light environment Lake Malawi male coloration mbuna cichlids Metriaclima zebra sensory bias UV coloration UV perception visual communication.
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First record of abnormal body coloration in a rockfish Sebastes koreanus(Scorpaenoidei:Sebastidae)from coastal water of China based on morphological characteristics and DNA barcoding
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作者 Ang LI Huan WANG +1 位作者 Changting AN Shufang LIU 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2024年第2期640-646,共7页
The first record of abnormal body coloration in Sebastes koreanus Kim and Lee,1994,from the Yellow Sea of China,was documented based on morphological characteristics and DNA barcoding.The two rockfish specimens were c... The first record of abnormal body coloration in Sebastes koreanus Kim and Lee,1994,from the Yellow Sea of China,was documented based on morphological characteristics and DNA barcoding.The two rockfish specimens were collected from the coastal waters of Qingdao,China,and the whole body and all fins of them were red.Of the two red-colored rockfish,there were tiny deep red spots on each fin,2 red radial stripes behind and below the eyes and 1 large deep red blotch on the opercula,while the similar stripe and spot patterns are also present in the S.koreanus specimens with normal body coloration.The countable characteristics of the two specimens are in the range of the morphometry of S.koreanus.To further clarify the species identity and taxonomic status of the two specimens,DNA barcode analysis was carried out.The genetic distance between the red-colored rockfish and S.koreanus was 0,and the minimum net genetic distances between the red-colored rockfish and other Sebastes species except for S.koreanus were 3.0%,which exceeds the threshold of species delimitation.The phylogenetic analysis showed that the DNA barcoding sequences of the two red-colored rockfish clustered with the S.koreanus sequences.The above results of DNA barcode analysis also support that the two red-colored rockfish could be identified as the species of S.koreanus.The mechanism of color variation in S.koreanus is desirable for further research and the species could be an ideal model to study the color-driven speciation of the rockfishes. 展开更多
关键词 abnormal body coloration Sebastes koreanus coastal water of China Yellow Sea morphological characteristics DNA barcoding
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Unraveling the regulatory network of flower coloration in soybean:Insights into roles of GmMYBA3 and GmMYBR1
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作者 Ruifang Gao Yueqing Li +8 位作者 Yanan Wang Xiaotong Shan Siqi Yang Ye Zhang Saiyu Ma Chunbao Zhang Jianchun Qin Li Wang Xiang Gao 《The Crop Journal》 SCIE CSCD 2024年第2期443-455,共13页
Anthocyanins play crucial roles in pollen protection and pollinator attraction in flowering plants.However,the mechanisms underlying flower color determination and whether floral anthocyanin regulators participate in ... Anthocyanins play crucial roles in pollen protection and pollinator attraction in flowering plants.However,the mechanisms underlying flower color determination and whether floral anthocyanin regulators participate in other processes remain largely unresolved in soybeans(Glycine max).In this study,we investigated the genetic components and mechanisms governing anthocyanin biosynthesis in soybean flowers.Molecular and genetic studies have characterized two antagonistic regulators,the positive activator GmMYBA3 and the negative repressor GmMYBR1,that modulate the gene expression of anthocyanin biosynthesis in soybean flowers.Further findings revealed a regulatory interplay between GmMYBA3 and GmMYBR1 bridged by GmTT8a,highlighting the complexity of anthocyanin regulation in different soybean organs.Exploration of additional soybean cultivars demonstrated the universality of GmMYBA3 and GmMYBR1 in regulating floral anthocyanin biosynthesis-related genes,with GmF3’5’H identified as a crucial determinant of white flower color.This study provides a molecular mechanism underlying soybean flower color determination,paving the way for the molecular modification of soybean flowers to probably enhance their resistance to abiotic stresses and attractiveness to pollinators. 展开更多
关键词 ANTHOCYANIN Flower color determination MBW complex MYB repressor Pleiotropic regulator
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Structure-activity Relationships of the Coloration and Stability of Anthocyanidins 被引量:1
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作者 翁晨 赵昶灵 王崇德 《Agricultural Science & Technology》 CAS 2014年第4期526-532,共7页
Taking the six common anthocyanidins in nature, i.e. cyanidin, delphinidin, malvidin, pelargonidin, peonidin and petunidin, as examples, this paper summarized the main achievements about the structure-activity relatio... Taking the six common anthocyanidins in nature, i.e. cyanidin, delphinidin, malvidin, pelargonidin, peonidin and petunidin, as examples, this paper summarized the main achievements about the structure-activity relationships of the coloration and stability of anthocyanidins. The coloration and stability of anthocyanidins are funda- mentally determined by the chemical and spatial structures of the anthocyanidins. The electron-deficient state, hydroxylation and methylation patterns, especially the ones on the B-ring, and coplanarity of the three rings of anthocyanidins are inde- pendently or synergetically, positively and/or negatively, influence the coloration and stability of the anthocyanidins. Thereinto, the in vivo colorations of anthocyanins are also related to the organ-selective and crystal- or anthocyanic vacuolar inclusion- related existence of the anthocyanidins. This review could provide a reference for the researches of the structure-optimizing and function-exploiting of anthocyanidins and also for the selection of the crops and cultivars containing specific anthocyani- din profiles. 展开更多
关键词 Structure-activity relationship ANTHOCYANIDINS coloration STABILITY
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Expression levels of GSTA2 and APOD genes might be associated with carotenoid coloration in golden pheasant(Chrysolophus pictus) plumage 被引量:4
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作者 Guang-Qi GAO Li-Shuang SONG +1 位作者 Bin TONG Guang-Peng LI 《Zoological Research》 CAS CSCD 2016年第3期144-150,共7页
Carotenoids, which generate yellow, orange, and red colors, are crucial pigments in avian plumage. Investigations into genes associated with carotenoid- based coloration in avian species are important; however, such r... Carotenoids, which generate yellow, orange, and red colors, are crucial pigments in avian plumage. Investigations into genes associated with carotenoid- based coloration in avian species are important; however, such research is difficult because carotenoids cannot be synthetized in vertebrates as they are only derived from dietary sources. Here, the golden pheasant (Chrysolophus pictus) was used as a model in analysis of candidate gene expression profiles implicated in carotenoid binding and deposition. Using mass and Raman spectrometry to confirm the presence of carotenoids in golden pheasant feathers, we found C40H540 and C40H5602 in feathers with yellow to red colors, and in the rachis of iridescent feathers. The global gene expression profiles in golden pheasant skins were analyzed by RNA-seq and all six carotenoid binding candidate genes sequenced were studied by real- time PCR. STAR4, GSTA2, Scarbl, and APOD in feather follicles showed different expressions in red breast and orange nape feathers compared with that of iridescent mantle feathers. Further comparison of golden pheasant yellow rump and Lady Amherst's pheasant (Chrysolophus amherstiae) white nape feathers suggested that GSTA2 and APOD played a potential role in carotenoid-based coloration in golden pheasant. 展开更多
关键词 Expression Carotenoid coloration Candidate genes Golden pheasant FEATHER
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Physiological and Transcriptomic Changes During Autumn Coloration and Senescence in Ginkgo biloba Leaves 被引量:6
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作者 Weixing Li Lu Wang +5 位作者 Zhichong He Zhaogeng Lu Jiawen Cui Ningtao Xu Biao Jin Li Wang 《Horticultural Plant Journal》 SCIE 2020年第6期396-408,共13页
Autumn leaf senescence and coloration is a complex process and a striking natural phenomenon.Here,through biology approach integrating transcriptomic analyses in Ginkgo biloba,we determined that the content of chlorop... Autumn leaf senescence and coloration is a complex process and a striking natural phenomenon.Here,through biology approach integrating transcriptomic analyses in Ginkgo biloba,we determined that the content of chlorophyll decreased during leaf senescence,while carotenoid components increased until late October in the turning stage(TS)and then decreased in the yellow leaf stage(YS).Simultaneously,chlorophyll biosynthesis genes exhibited significantly lower expression levels while chlorophyll degradation genes showed increased expression from the green leaf stage(GS)to YS.However,carotenoid biosynthesis-related genes showed enhanced expression,especially in TS.An analysis of the expression of genes related to senescence demonstrated that the expression levels of most abscisic acid-and jasmonic acid-related genes,autophagy,WRKY,and NAC genes increased,whereas cytoskeleton-,photosynthesis-,and antioxidation-related genes decreased from GS to YS.Furthermore,G.biloba seedlings exogenously treated with abscisic acid,jasmonic acid,or ultraviolet-B radiation all showed obvious color variation and senescence symptoms.We used these exogenously seedlings to further validate the function of several genes involved in chlorophyll biosynthesis and senescence.Taken together,these results contribute to the elucidation of the molecular mechanisms of leaf coloration and senescence in G.biloba as well as in the identification of candidate genes involved in this process. 展开更多
关键词 Ginkgo biloba Leaf senescence Leaf coloration TRANSCRIPTOME Gene expression
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Insights into flavonoid biosynthesis during cucumber fruit peel coloration based on metabolite profiling and transcriptome analyses 被引量:4
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作者 Shuying He Yi Ye +5 位作者 Ying Yuan Mai Lv Meixing Wang Qiang Xu Xuewen Xu Xuehao Chen 《Horticultural Plant Journal》 SCIE CAS CSCD 2023年第4期763-776,共14页
The fruit peel color is a crucial trait of cucumber.To better understand the molecular mechanisms underlying cucumber peel coloration,we compared the UPLC-ESI-MS/MS-based flavonoid metabolomic and RNA sequencing-based... The fruit peel color is a crucial trait of cucumber.To better understand the molecular mechanisms underlying cucumber peel coloration,we compared the UPLC-ESI-MS/MS-based flavonoid metabolomic and RNA sequencing-based transcriptomic profiling of the brown peeled cucumber line‘PW’at six developmental stages.A total of 210 flavonoid metabolites were identified.Of which,117 flavonoid metabolites were differentially accumulated.In this study,weighted gene co-expression network analysis combined with Kyoto Encyclopedia of Gene and Genomes enrichment analysis revealed key genes coding for seven enzymes and eight transcription factors(TFs)associated with flavonoid biosynthesis.Among them,the R2R3MYB CsaV3_4G001130 is the best candidate gene that is responsible for controlling mature fruit colors in cucumber.Sanger sequencing revealed one nonsynonymous SNP in the exon of CsaV3_4G001130 among the selected 11 cucumber lines,which introduced a premature stop codon,generating a truncated protein in pale yellow or creamy peeled fruits.Yeast two-hybrid assays showed a direct interaction of CsaV3_4G001130 with the bHLH TF CsaV3_1G002260 and the WD40 protein CsaV3_5G001800.However,the interactions were influenced by the nonsynonymous SNP we identified.Our finding revealed that the integrated transcriptome and metabolome analysis further demonstrated that the abundance of some pigmented flavonoids(especially anthocyanins and chalcones)contributed to the coloration of‘PW’fruits.These findings pave the way for elucidation of flavonoid biosynthesis and improvement of cucumber peel color in the future. 展开更多
关键词 CUCUMBER Fruit peel coloration Transcriptome METABOLOME MYB
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De novo transcriptome sequencing reveals candidate genes involved in orange shell coloration of bay scallop Argopecten irradians 被引量:2
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作者 TENG Wen CONG Rihao +1 位作者 QUE Huayong ZHANG Guofan 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2018年第4期1408-1416,共9页
Molluscan shell color has received persistent attention for its distinctive diversity and complexity. In the present study, six transcriptome libraries obtained from two developmental stages, pre-pigmentation and post... Molluscan shell color has received persistent attention for its distinctive diversity and complexity. In the present study, six transcriptome libraries obtained from two developmental stages, pre-pigmentation and post-pigmentation, were used for paired-end sequencing in the bay scallop Argopecten irradians. In total, 289 839 646 paired-end reads were assembled into 70 929 transcripts. Using BLASTX and BLASTN, 30 896 unigenes were successfully annotated against the SWISS-PROT, NR, and KOG database. Gene ontology annotation and Kyoto Encyclopedia of Genes and Genomes classification identified numbers of unigenes involved in biomineralization and pigmentation. Digital gene expression analysis revealed that melanin, trace metal elements and porphyrins are potentially involved in shell coloration of A. irradians. 展开更多
关键词 molluscs shell coloration differentially expressed genes gene ontology
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Variation in female aggression in 2 three-spined stickleback populations with female throat and spine coloration 被引量:1
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作者 Lengxob YONG Brittney LEE Jeffrey S. MCKINNON 《Current Zoology》 SCIE CAS CSCD 2018年第3期345-350,共6页
Despite growing interest in female ornament evolution, we still have a rudimentary understanding of female display traits relative to similar traits in males. Under one popular adaptive scenario, female ornaments are ... Despite growing interest in female ornament evolution, we still have a rudimentary understanding of female display traits relative to similar traits in males. Under one popular adaptive scenario, female ornaments are hypothesized to function in female-female competition and serve as badges of status, such that their expression is linked with elevated aggression in some cases. In this study, we investigated the relationship between 2 female ornaments--male-like red throat color and red spine coloration--and female aggression in 2 independently derived stream-resident populations of three-spined stickleback Gasterosteus aculeatus. Using simulated intrusions, we tested whether females with redder ornaments were generally more aggressive, and for variation in aggressive and social behaviors between the 2 populations. We found that the red intensity of the throat and spine did not predict aggression levels in either population, suggesting a limited role for both female ornaments during female-female interaction. The 2 populations exhibited different levels of aggressive behaviors, unrelated to the color patches. Our results suggest that variation in selective pressures between populations may promote interpopulation variance in aggressive behavior but not the correlation between female ornamentation and aggression, and raise the possibility that red coloration may have evolved through different mechanisms or processes in the 2 populations. 展开更多
关键词 AGGRESSION animal coloration female ornaments Gasterosteus aculeatus stickleback.
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Does reproductive mode affect sexually-selected coloration?Evaluating UV-blue spots in parthenogenetic and bisexual lizards of the genus Darevskia
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作者 Andran ABRAMJAN Marine ARAKELYAN Daniel FRYNTA 《Current Zoology》 SCIE CAS CSCD 2021年第2期201-213,共13页
Sexual selection often leads to evolution of conspicuous signals,raising the chances of attracting not only potential mates,but also predators.In lacertid lizards,ultraviolet(UV)-blue spots on flanks and shoulders rep... Sexual selection often leads to evolution of conspicuous signals,raising the chances of attracting not only potential mates,but also predators.In lacertid lizards,ultraviolet(UV)-blue spots on flanks and shoulders represent such a trait.Some level of correlation between male and female ornamen-tation is also known to exist.Therefore,the phenotype of females may change in the absence of sexual selection.We tested this hypothesis on a complex of parthenogenetic and bisexual lizards of the genus Darevskia.We evaluated area,counts,and chromatic properties(UV opponency,sat-uration)of UV-blue spots and compared the values between the clones and their bisexual progeni-tor species.We found a fair heterogeneity between the parthenogenetic species,but no general tendency toward higher crypsis or conspicuousness.Values of the parthenogens were not signifi-cantly different from the values of sexual females.A possible explanation is that the changes in se-lective forces associated with parthenogenetic reproduction are too small to affect the resulting pattern of selective pressures on the studied traits,or that the phenotypes of the parthenogens re-sult from the unique combination of parental genomes and are conserved by clonal reproduction. 展开更多
关键词 clonal reproduction coloration reptiles sexual selection visual modeling
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Spectroscopic Features and Coloration of Gem-Quality Green Tsavorite in Major International Deposits and China
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作者 L Linsu ZHANG Yong +3 位作者 LI Hongbo LU Taijin MAO Bing CHEN Hua 《矿物学报》 CAS CSCD 北大核心 2013年第S1期63-63,共1页
Tsavorite green colored by Cr3+/V3+ has been traditionally found and mined in Tanzania, Kenya and Madagascar in the Neoproterozoic Mozambique metamorphic belt (NMMB), and recently be found in Sanjiang, Litang, Sichuan... Tsavorite green colored by Cr3+/V3+ has been traditionally found and mined in Tanzania, Kenya and Madagascar in the Neoproterozoic Mozambique metamorphic belt (NMMB), and recently be found in Sanjiang, Litang, Sichuan, China. The differences of the chemical formula, spectroscopic features, as well as the concentrations of the V2O3 and Cr2O3 in the tsavorite crystals collected from major international deposits and Sanjiang, China have been investigated using EPMA, XRF, UV-VIS spectrometers, FTIR, Raman scattering microscopy, DiamondView TM techniques. It was found that the chemical formulas of African tsavorite and Chinese tsavorite are Ca3(Al,V)2[SiO4]3 and Ca3(Al,Cr)2[SiO4]3, respectively, indicating that tsavorite is a solid solution between dominant grossular and minor goldmanite and uvarovite. Two broad bands centered at 430 nm and 605 nm were the main absorption features in the tsavorite samples, which attribute to the absorption of Cr3+ and/or V3+ ions in the lattice. The green coloration is caused by Cr3+ and/or V3+ ions resulting in the absorption of purple and red components of the visible light. Absorptions caused of Fe3+ and Fe2+ ions could add the bluish color component in some of tsavorite samples. The intensity of green color is proportional to the concentrations of V2O3 and Cr2O3. The basic gemological properties, such as refractive index in the investigated samples were presented, and the definition and chemical and spectroscopic properties of tsavorite are discussed. 展开更多
关键词 tsavorite SPECTROSCOPIC feature coloration China EAST AFRICA
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Synthesis and Selective Coloration of Monoaza Crown Ethers Bearing Picrylamino-type Side Arms for Alkali Metal Salts and Methylamine
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作者 WeiZENG ZhiHuaMAO +3 位作者 MiGONG ChunChunZHANG ShengYingQIN JunSU 《Chinese Chemical Letters》 SCIE CAS CSCD 2003年第8期786-789,共4页
N-pivot lariat ethers with picrylamino group as a chromophore (1, 2 and 3) have been prepared by reaction of N-(4-aminoaryl)monoaza crown ethers with picryl chrolide, and the selective coloration of 1, 2 and 3 for alk... N-pivot lariat ethers with picrylamino group as a chromophore (1, 2 and 3) have been prepared by reaction of N-(4-aminoaryl)monoaza crown ethers with picryl chrolide, and the selective coloration of 1, 2 and 3 for alkali metal salts and amines has been studied by UV-Vis spectra. 展开更多
关键词 SYNTHESIS selective coloration monoaza crown ether alkali metal salts methylamine.
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