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In Silico Prediction and Validation of Gfap as an miR-3099 Target in Mouse Brain 被引量:4
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作者 Shahidee Zainal Abidin Jia-Wen Leong +4 位作者 Marzieh Mahmoudi Norshariza Nordin Syahril Abdullah Pike-See Cheah King-Hwa Ling 《Neuroscience Bulletin》 SCIE CAS CSCD 2017年第4期373-382,共10页
MicroRNAs are small non-coding RNAs that play crucial roles in the regulation of gene expression and protein synthesis during brain development. MiR-3099 is highly expressed throughout embryogenesis, especially in the... MicroRNAs are small non-coding RNAs that play crucial roles in the regulation of gene expression and protein synthesis during brain development. MiR-3099 is highly expressed throughout embryogenesis, especially in the developing central nervous system. Moreover, miR-3099 is also expressed at a higher level in differentiating neurons in vitro, suggesting that it is a potential regulator during neuronal cell development. This study aimed to predict the target genes of miR-3099 via in-silico analysis using four independent prediction algorithms(miRDB,miRanda, Target Scan, and DIANA-micro-T-CDS) with emphasis on target genes related to brain development and function. Based on the analysis, a total of 3,174 miR-3099 target genes were predicted. Those predicted by at least three algorithms(324 genes) were subjected to DAVID bioinformatics analysis to understand their overallfunctional themes and representation. The analysis revealed that nearly 70% of the target genes were expressed in the nervous system and a significant proportion were associated with transcriptional regulation and protein ubiquitination mechanisms. Comparison of in situ hybridization(ISH) expression patterns of miR-3099 in both published and in-house-generated ISH sections with the ISH sections of target genes from the Allen Brain Atlas identified 7 target genes(Dnmt3a, Gabpa, Gfap, Itga4,Lxn, Smad7, and Tbx18) having expression patterns complementary to miR-3099 in the developing and adult mouse brain samples. Of these, we validated Gfap as a direct downstream target of miR-3099 using the luciferase reporter gene system. In conclusion, we report the successful prediction and validation of Gfap as an miR-3099 target gene using a combination of bioinformatics resources with enrichment of annotations based on functional ontologies and a spatio-temporal expression dataset. 展开更多
关键词 Target gene NEUROGENESIS In silico astrogliogenesis BIOINFORMATICS
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Progenies of NG2 glia: what do we learn from transgenic mouse models ? 被引量:1
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作者 Qilin Guo Anja Scheller Wenhui Huang 《Neural Regeneration Research》 SCIE CAS CSCD 2021年第1期43-48,共6页
In the mammalian central nervous system,nerve-glia antigen 2(NG2)glia are considered the fourth glial population in addition to astrocytes,oligodendrocytes and microglia.The fate of NG2 glia in vivo has been carefully... In the mammalian central nervous system,nerve-glia antigen 2(NG2)glia are considered the fourth glial population in addition to astrocytes,oligodendrocytes and microglia.The fate of NG2 glia in vivo has been carefully studied in several transgenic mouse models using the Cre/loxP strategy.There is a clear agreement that NG2 glia mainly serve as progenitors for oligodendrocytes and a subpopulation of astrocytes mainly in the ventral forebrain,whereas the existence of a neurogenic potential of NG2 glia is lack of adequate evidence.This mini review summarizes the findings from recent studies regarding the fate of NG2 glia during development.We will highlight the age-and-region-dependent heterogeneity of the NG2 glia differentiation potential.We will also discuss putative reasons for inconsistent findings in various transgenic mouse lines of previous studies. 展开更多
关键词 astrogliogenesis cell fate Cre/loxP system development differentiation embryonic brain neurogenesis NG2 glia oligodendrocyte lineage oligodendrocyte precursor cells
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Neuroligin-3 R451C induces gain-of-function gene expression in astroglia in an astroglia-enriched brain organoid model
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作者 Rui Dang Mridul Dalmia +6 位作者 Ziyuan Ma Mengmeng Jin Kushal Aluru Vincent R.Mirabella Ava V.Papetti Li Cai Peng Jiang 《Cell Regeneration》 2025年第1期16-28,共13页
Astroglia are integral to brain development and the emergence of neurodevelopmental disorders.However,studying the pathophysiology of human astroglia using brain organoid models has been hindered by ineficient astrogl... Astroglia are integral to brain development and the emergence of neurodevelopmental disorders.However,studying the pathophysiology of human astroglia using brain organoid models has been hindered by ineficient astrogliogene-sis.In this study,we introduce a robust method for generating astroglia-enriched organoids through BMP4 treatment during the neural differentiation phase of organoid development.Our RNA sequencing analysis reveals that astroglia developed within these organoids exhibit advanced developmental characteristics and enhanced synaptic functions compared to those grown under traditional two-dimensional conditions,particularly highlighted by increased neu-rexin(NRXN)-neuroligin(NLGN)signaling.Cell adhesion molecules,such as NRXN and NLGN,are essential in regulat-ing interactions between astroglia and neurons.We further discovered that brain organoids derived from human embryonic stem cells(hESCs)harboring the autism-associated NLGN3 R451C mutation exhibit increased astroglio-genesis.Notably,the NLGN3 R451C astroglia demonstrate enhanced branching,indicating a more intricate morphol-ogy.Interestingly,our RNA sequencing data suggest that these mutant astroglia significantly upregulate pathways that support neural functions when compared to isogenic wild-type astroglia.Our findings establish a novel astroglia-enriched organoid model,offering a valuable platform for probing the roles of human astroglia in brain development and related disorders. 展开更多
关键词 Human induced pluripotent stem cells Human embryonic stem cells astrogliogenesis Brain organoid NEUREXIN Neuroligin Autism Neuroligin-3 R451C
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Co-culture with microglia promotes neural stem cells differentiation into astrocytes 被引量:2
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作者 GU Feng WANG Juan +1 位作者 FU Li MA Yong-jie 《Chinese Medical Journal》 SCIE CAS CSCD 2011年第20期3394-3398,共5页
Background Neural stem cells (NSCs) are a self-renewing and multipotent population of the central nervous system (CNS), which are active during development and maintain homeostasis and tissue integrity throughout ... Background Neural stem cells (NSCs) are a self-renewing and multipotent population of the central nervous system (CNS), which are active during development and maintain homeostasis and tissue integrity throughout life. Microglias are an immune cell population resident in the CNS, which have crucial physiological functions in the developing and adult CNS. This study aimed to investigate that whether microglia co-cultured with NSCs could promote astrogliogenesis from NSCs. Methods Microglia and NSCs were co-cultured in 24-well insert plates. NSCs were plated in the bottom of the well and microglia in the insert. Fluorescent staining, Western blotting and RT-PCR were used to determine the effect of microglia on NSCs differentiation. Results Co-culture of microglia and NSCs promoted astrogliogenesis from NSCs. Several key genes, such as Notch 1, Notch 2, Notch 3, Hes 5, and NRSFwere downregulated, while the critical genes Idl and Id2 were upregulated. BMP2 and FGF2 were upregulated. Conclusion Microglias act as a regulator of NSCs astrogliogenesis. 展开更多
关键词 MICROGLIA stem cells astrogliogenesis
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