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Utilizing Single-cell and Spatial RNA-seq databasE for Alzheimer’s Disease(ssREAD)in hypothesis-driven queries
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作者 Diana Acosta Cankun Wang +1 位作者 Qin Ma Hongjun Fu 《Neural Regeneration Research》 2026年第2期677-678,共2页
Alzheimer’s disease(AD)is the most common form of dementia.In addition to the lack of effective treatments,there are limitations in diagnostic capabilities.The complexity of AD itself,together with a variety of other... Alzheimer’s disease(AD)is the most common form of dementia.In addition to the lack of effective treatments,there are limitations in diagnostic capabilities.The complexity of AD itself,together with a variety of other diseases often observed in a patient’s history in addition to their AD diagnosis,make deciphering the molecular mechanisms that underlie AD,even more important.Large datasets of single-cell RNA sequencing,single-nucleus RNA-sequencing(snRNA-seq),and spatial transcriptomics(ST)have become essential in guiding and supporting new investigations into the cellular and regional susceptibility of AD.However,with unique technology,software,and larger databases emerging;a lack of integration of these data can contribute to ineffective use of valuable knowledge.Importantly,there was no specialized database that concentrates on ST in AD that offers comprehensive differential analyses under various conditions,such as sex-specific,region-specific,and comparisons between AD and control groups until the new Single-cell and Spatial RNA-seq databasE for Alzheimer’s Disease(ssREAD)database(Wang et al.,2024)was introduced to meet the scientific community’s growing demand for comprehensive,integrated,and accessible data analysis. 展开更多
关键词 sex specific alzheimer s disease ad deciphering molecular mechanisms spatial transcriptomics ssread spatial transcriptomics st Alzheimers disease single cell RNA seq
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CancerSRT:a spatially resolved transcriptomics database for human cancers
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作者 Yuying Huo Jiakang Wang +7 位作者 Chengcheng Liu Jinxia Wang Chen Wang Wenbo Guo Zhiyuan Yuan Tiantian Guo Jin Gu Xiangyu Li 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2024年第12期1505-1508,共4页
Human cancer is one of the leading causes of death worldwide.Tumor heterogeneity and complex microenvironment are major challenges for anti-cancer treatment.A better understanding of the tumor heterogeneity might cont... Human cancer is one of the leading causes of death worldwide.Tumor heterogeneity and complex microenvironment are major challenges for anti-cancer treatment.A better understanding of the tumor heterogeneity might contribute to more precise diagnosis and treatment.Recent advances in single-cell RNA-sequencing(scRNA-seq)have provided valuable insights into cell fate determination and development in cancer,but the main limitation is that cellular spatial information is lost.Fortunately,spatially resolved transcriptomics technologies have enabled gene expression profiling with spatial coordinates in tissues,which opens up new avenues for deciphering the cancer spatial structure and accelerating oncological research. 展开更多
关键词 DIAGNOSIS spatially RESOLVED
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基于Agricultural Animal Omics Database(AAOD)数据库挖掘绵羊GDF9基因变异
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作者 潘晔君 刘耿 +2 位作者 潘传英 张清峰 蓝贤勇 《畜牧兽医杂志》 2025年第3期1-9,共9页
目前利用大数据和组学数据库提高绵羊繁殖性能成为解决当前产业发展的关键之一。绵羊生长分化因子9(GDF9)基因对卵泡发育、排卵率及产羔数起着至关重要的作用,也是目前确定的绵羊多胎性状的主效基因之一;虽然其部分重要突变位点与产羔... 目前利用大数据和组学数据库提高绵羊繁殖性能成为解决当前产业发展的关键之一。绵羊生长分化因子9(GDF9)基因对卵泡发育、排卵率及产羔数起着至关重要的作用,也是目前确定的绵羊多胎性状的主效基因之一;虽然其部分重要突变位点与产羔数有关,但绵羊该基因所有可能基因变异如何挖掘仍然是一个尚待解决的问题。近年来,西北农林科技大学动物科技学院姜雨团队开发出Agricultural Animal Omics Database(AAOD)数据库,它整合了全球公共数据及中国本地特色绵羊品种的高深度基因组数据,涵盖50多个品种的遗传变异(SNPs、InDels)、表观标记及表型关联信息,并实现每月动态更新。基于此,本研究旨在利用AAOD数据库挖掘绵羊GDF9基因变异,并期望深入解析GDF9基因的分子结构、表达模式、富集分析、挖掘新的与繁殖力相关的突变位点及其在绵羊繁殖力中的潜在作用。这些结果将为基因编辑技术改良绵羊繁殖力提供新的潜在位点,将为提高绵羊繁殖力提供了遗传改良的理论依据与策略。 展开更多
关键词 绵羊 GDF9基因 Agricultural Animal Omics database(AAOD)数据库 单核苷酸多态性 插入缺失
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Phase distortion correction of fringe patterns in spaceborne Doppler asymmetric spatial heterodyne interferometry 被引量:1
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作者 PEI Hui-yi JIANG Lun +4 位作者 WANG Jin-jiang CUI Yong FANG Yuan-xiang ZHANG Jia-ming CHEN Ci 《中国光学(中英文)》 北大核心 2025年第2期382-392,共11页
As an advanced device for observing atmospheric winds,the spaceborne Doppler Asymmetric Spatial Heterodyne(DASH)interferometer also encounters challenges associated with phase distortion,par-ticularly in limb sounding... As an advanced device for observing atmospheric winds,the spaceborne Doppler Asymmetric Spatial Heterodyne(DASH)interferometer also encounters challenges associated with phase distortion,par-ticularly in limb sounding scenarios.This paper discusses interferogram modeling and phase distortion cor-rection techniques for spaceborne DASH interferometers.The modeling of phase distortion interferograms with and without Doppler shift for limb observation was conducted,and the effectiveness of the analytical expression was verified through numerical simulation.The simulation results indicate that errors propagate layer by layer while using the onion-peeling inversion algorithm to handle phase-distorted interferograms.In contrast,the phase distortion correction algorithm can achieve effective correction.This phase correction method can be successfully applied to correct phase distortions in the interferograms of the spaceborne DASH interferometer,providing a feasible solution to enhance its measurement accuracy. 展开更多
关键词 Doppler asymmetric spatial heterodyne spectroscopy phase distortion phase inversion atmospheric wind measurement
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Spatial Evolution Characteristics and Influencing Factors of Urban Green Innovation in China 被引量:1
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作者 PENG Wenbin SU Xinyi TANG Yueliang 《Chinese Geographical Science》 2025年第2期234-249,共16页
Cities are important carriers of green innovation.The foundation for accelerating China's ecological civilization construction and fostering regionally coordinated and sustainable development is quantitative analy... Cities are important carriers of green innovation.The foundation for accelerating China's ecological civilization construction and fostering regionally coordinated and sustainable development is quantitative analysis of the spatial evolution pattern and influencing factors of urban green innovation,as well as revealing the development differences between regions.This study's research object includes 284 Chinese cities that are at the prefecture level or above,excluding Xizang,Hong Kong,Macao,and Taiwan of China due to incomplete data.The spatial evolution characteristics of urban green innovation in China between 2005 and 2021 are comprehensively described using the gravity center model and boxplot analysis.The factors that affect urban green innovation are examined using the spatial Durbin model(SDM).The findings indicate that:1)over the period of the study,the gravity center of urban green innovation in China has always been distributed in the Henan-Anhui border region,showing a migration characteristic of‘initially shifting northeast,subsequently southeast',and the migration speed has gradually increased.2)Although there are also noticeable disparities in east-west,the north-south gap is the main cause of the shift in China's urban green innovation gravity center.The primary areas of urban green innovation in China are the cities with green innovation levels higher than the median.3)The main influencing factor of urban green innovation is the industrial structure level.The effect of the financial development level,the government intervention level,and the openness to the outside world degree on urban green innovation is weakened in turn.The environmental regulation degree is not truly influencing urban green innovation.The impact of various factors on green innovation across cities of different sizes,exhibiting heterogeneity.This study is conducive to broadening the academic community's comprehension of the spatial evolution characteristics of urban green innovation and offering a theoretical framework for developing policies for the all-encompassing green transformation of social and economic growth. 展开更多
关键词 urban green innovation spatial evolution spatial Durbin model China
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Customizing solid electrolyte interphase with bilayer spatial structure to mitigate swelling towards long-term life lithium battery 被引量:1
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作者 Dongni Zhao Hongcheng Liang +6 位作者 Shumin Wu Yin Quan Xinyi Hu Jingni Li Peng Wang Xiaoling Cui Shiyou Li 《Journal of Energy Chemistry》 2025年第6期702-712,I0015,共12页
The swelling behavior and stability in solid electrolyte interphase(SEI)have been proved to determine the battery cycle life.A high swollen,unstable SEI shows a high permeability to electrolyte,which results in the ra... The swelling behavior and stability in solid electrolyte interphase(SEI)have been proved to determine the battery cycle life.A high swollen,unstable SEI shows a high permeability to electrolyte,which results in the rapid battery performance degradation.Here,we customize two SEIs with different spatial structures(bilayer and mosaic)by simply regulating the proportion of additive fluoroethylene carbonate.Surprisingly,due to the uniform distribution of dense inorganic nano-crystals in the inner,the bilayer SEI exhibits low-swelling and excellent mechanical properties,so the undesirable side reactions of the electrolyte are effectively suppressed.In addition,we put forward the growth rate of swelling ratio(GSR)as a key indicator to reveal the swelling change in SEI.The GSR of bilayer SEI merely increases from1.73 to 3.16 after the 300th cycle,which enables the corresponding graphite‖Li battery to achieve longer cycle stability.The capacity retention is improved by 47.5% after 300 cycles at 0.5 C.The correlation among SEI spatial structure,swelling behavior,and battery performance provides a new direction for electrolyte optimization and interphase structure design of high energy density batteries. 展开更多
关键词 Lithium battery SEI film spatial structure Swelling behavior Cycle-stable
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Spatial differentiation of carbon emissions from energy consumption based on machine learning algorithm:A case study during 2015–2020 in Shaanxi,China 被引量:1
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作者 Hongye Cao Ling Han +1 位作者 Ming Liu Liangzhi Li 《Journal of Environmental Sciences》 2025年第3期358-373,共16页
Carbon emissions resulting from energy consumption have become a pressing issue for governments worldwide.Accurate estimation of carbon emissions using satellite remote sensing data has become a crucial research probl... Carbon emissions resulting from energy consumption have become a pressing issue for governments worldwide.Accurate estimation of carbon emissions using satellite remote sensing data has become a crucial research problem.Previous studies relied on statistical regression models that failed to capture the complex nonlinear relationships between carbon emissions and characteristic variables.In this study,we propose a machine learning algorithm for carbon emissions,a Bayesian optimized XGboost regression model,using multi-year energy carbon emission data and nighttime lights(NTL)remote sensing data from Shaanxi Province,China.Our results demonstrate that the XGboost algorithm outperforms linear regression and four other machine learning models,with an R^(2)of 0.906 and RMSE of 5.687.We observe an annual increase in carbon emissions,with high-emission counties primarily concentrated in northern and central Shaanxi Province,displaying a shift from discrete,sporadic points to contiguous,extended spatial distribution.Spatial autocorrelation clustering reveals predominantly high-high and low-low clustering patterns,with economically developed counties showing high-emission clustering and economically relatively backward counties displaying low-emission clustering.Our findings show that the use of NTL data and the XGboost algorithm can estimate and predict carbon emissionsmore accurately and provide a complementary reference for satellite remote sensing image data to serve carbon emission monitoring and assessment.This research provides an important theoretical basis for formulating practical carbon emission reduction policies and contributes to the development of techniques for accurate carbon emission estimation using remote sensing data. 展开更多
关键词 Machine learning Energy carbon emissions Nighttime light spatial distribution
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Single-cell and spatial omics:exploring hypothalamic heterogeneity
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作者 Muhammad Junaid Eun Jeong Lee Su Bin Lim 《Neural Regeneration Research》 SCIE CAS 2025年第6期1525-1540,共16页
Elucidating the complex dynamic cellular organization in the hypothalamus is critical for understanding its role in coordinating fundamental body functions. Over the past decade, single-cell and spatial omics technolo... Elucidating the complex dynamic cellular organization in the hypothalamus is critical for understanding its role in coordinating fundamental body functions. Over the past decade, single-cell and spatial omics technologies have significantly evolved, overcoming initial technical challenges in capturing and analyzing individual cells. These high-throughput omics technologies now offer a remarkable opportunity to comprehend the complex spatiotemporal patterns of transcriptional diversity and cell-type characteristics across the entire hypothalamus. Current single-cell and single-nucleus RNA sequencing methods comprehensively quantify gene expression by exploring distinct phenotypes across various subregions of the hypothalamus. However, single-cell/single-nucleus RNA sequencing requires isolating the cell/nuclei from the tissue, potentially resulting in the loss of spatial information concerning neuronal networks. Spatial transcriptomics methods, by bypassing the cell dissociation, can elucidate the intricate spatial organization of neural networks through their imaging and sequencing technologies. In this review, we highlight the applicative value of single-cell and spatial transcriptomics in exploring the complex molecular-genetic diversity of hypothalamic cell types, driven by recent high-throughput achievements. 展开更多
关键词 cellular diversity HYPOTHALAMUS multi-omics single-cell transcriptomics spatial transcriptomics
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Impact of coking plant to heavy metal characteristics in groundwater of surrounding areas:Spatial distribution,source apportionment and risk assessments 被引量:1
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作者 Congqing Wang Wanjun Wang +5 位作者 ChaoWang Shixing Ren Yingjun Wu Meicheng Wen Guiying Li Taicheng An 《Journal of Environmental Sciences》 2025年第3期688-698,共11页
Coking industry is a potential source of heavy metals(HMs)pollution.However,its impacts to the groundwater of surrounding residential areas have not been well understood.This study investigated the pollution character... Coking industry is a potential source of heavy metals(HMs)pollution.However,its impacts to the groundwater of surrounding residential areas have not been well understood.This study investigated the pollution characteristics and health risks of HMs in groundwater nearby a typical coking plant.Nine HMs including Fe,Zn,Mo,As,Cu,Ni,Cr,Pb and Cd were analyzed.The average concentration of total HMswas higher in the nearby area(244.27μg/L)than that of remote area away the coking plant(89.15μg/L).The spatial distribution of pollution indices including heavy metal pollution index(HPI),Nemerow index(NI)and contamination degree(CD),all demonstrated higher values at the nearby residential areas,suggesting coking activity could significantly impact the HMs distribution characteristics.Four sources of HMs were identified by Positive Matrix Factorization(PMF)model,which indicated coal washing and coking emission were the dominant sources,accounted for 40.4%,and 31.0%,respectively.Oral ingestionwas found to be the dominant exposure pathway with higher exposure dose to children than adults.Hazard quotient(HQ)values were below 1.0,suggesting negligible non-carcinogenic health risks,while potential carcinogenic risks were from Pb and Ni with cancer risk(CR)values>10−6.Monte Carlo simulation matched well with the calculated results with HMs concentrations to be the most sensitive parameters.This study provides insights into understanding how the industrial coking activities can impact the HMs pollution characteristics in groundwater,thus facilitating the implement of HMs regulation in coking industries. 展开更多
关键词 Coking industry Heavy metal GROUNDWATER spatial distribution Source apportionment Monte Carlo simulation
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A Framework for Analyzing Spatial Heterogeneity and Influencing Factors of Campus Green Space in Xi’an,China 被引量:2
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作者 ZANG Zexuan ZHANG Liwei +5 位作者 LIU Yu YANG Xiping WANG Zhuangzhuang JIAO Lei WANG Hao LUO Ying 《Chinese Geographical Science》 2025年第4期786-801,共16页
Increased exposure to campus green spaces can make a positive contribution to the healthy development of students.However,understanding of the current supply of campus green space(CGS)and its drivers at different educ... Increased exposure to campus green spaces can make a positive contribution to the healthy development of students.However,understanding of the current supply of campus green space(CGS)and its drivers at different education stages is still limited.A new framework was established to evaluate the spatial heterogeneity and its influencing factors across all education stages(kindergarten,primary school,middle school,college)in 1100 schools at the urban scale of Xi’an,China.The research results show that:1)CGS is lower in the Baqiao district and higher in the Yanta and Xincheng districts of Xi’an City.‘Green wealthy schools are mainly concentrated in the Weiyang,Chang’an and Yanta districts.2)CGS of these schools in descending order is college(31.40%)>kindergarten(18.32%)>middle school(13.56%)>primary school(10.70%).3)Colleges have the most recreation sites(n(number)=2),the best education levels(11.93 yr),and the lowest housing prices(1.18×10^(4) yuan(RMB)/m^(2));middle schools have the highest public expenditures(3.97×10^(9) yuan/yr);primary schools have the highest CGS accessibility(travel time gap(TTG)=31.33).4)Multiscale Geographically Weighted Regression model and Spearman’s test prove that recreation sites have a significant positive impact on college green spaces(0.28–0.35),and education level has a significant positive impact on kindergarten green spaces(0.16–0.24).This research framework provides important insights for the assessment of school greening initiatives aimed at fostering healthier learning environments for future generations. 展开更多
关键词 campus green space(CGS) spatial heterogeneity multiscale geographically weighted regression Xi’an China
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Spatial and Temporal Evolution of Lithospheric Mantle beneath the Eastern North China Craton:Constraints from Mineral Chemistry of Peridotite Xenoliths from the Miocene Qingyuan Basalts and a Regional Synthesis 被引量:1
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作者 Jian-Fang Guo Qiang Ma +1 位作者 Jian-Ping Zheng Yu-Ping Su 《Journal of Earth Science》 2025年第2期474-484,共11页
Mineralogical data are presented for the peridotite xenoliths from Miocene(~19 Ma)Qingyuan basalts in the eastern North China Craton(NCC),with the aim of constraining on property of the sub-continental lithospheric ma... Mineralogical data are presented for the peridotite xenoliths from Miocene(~19 Ma)Qingyuan basalts in the eastern North China Craton(NCC),with the aim of constraining on property of the sub-continental lithospheric mantle(SCLM)beneath the northern Tan-Lu fault zone(TLFZ)during the Cenozoic.The Qingyuan peridotites are dominated by spinel lherzolites with moderate-Mg^(#)olivines(89.4 to 91.2),suggesting that the regional SCLM is mainly transitional and fertile.Light rare earth element(LREE)-depleted,slightly depleted and enriched clinopyroxenes(Cpx)are identified in different peridotites.Chemical compositions of the LREE-enriched Cpx and the presence of phlogopite suggest that the Qingyuan SCLM has experienced silicate-related metasomatism.The synthesis of available mineral chemical data of the mantle xenoliths across the NCC confirms the SCLM beneath the NCC is highly heterogeneous in time and space.The Mesozoic–Cenozoic SCLM beneath the TLFZ and neighboring regions are more fertile and thinner than that beneath the region away from the fault zone.The fertile and refractory peridotite xenoliths experienced varying degrees of silicate and carbonatite metasomatism,respectively.The spatial-temporal lithospheric mantle heterogeneity in composition,age and thickness suggest that the trans-lithosphere fault zone played an important role in heterogeneous replacement of refractory cratonic lithospheric mantle. 展开更多
关键词 lithospheric mantle peridotite xenoliths temporal and spatial variations Tan-Lu fault zone North China craton PETROLOGY GEOCHEMISTRY
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Nomogram for overall survival in ampullary adenocarcinoma using the surveillance,epidemiology,and end results database and external validation
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作者 Jia Yang Zi-Yi Wang +2 位作者 Jing Chen Yao Zhang Lei Chen 《World Journal of Clinical Oncology》 2025年第2期36-51,共16页
BACKGROUND Ampullary adenocarcinoma is a rare malignant tumor of the gastrointestinal tract.Currently,only a few cases have been reported,resulting in limited information on survival.AIM To develop a dynamic nomogram ... BACKGROUND Ampullary adenocarcinoma is a rare malignant tumor of the gastrointestinal tract.Currently,only a few cases have been reported,resulting in limited information on survival.AIM To develop a dynamic nomogram using internal and external validation to predict survival in patients with ampullary adenocarcinoma.METHODS Data were sourced from the surveillance,epidemiology,and end results stat database.The patients in the database were randomized in a 7:3 ratio into training and validation groups.Using Cox regression univariate and multivariate analyses in the training group,we identified independent risk factors for overall survival and cancer-specific survival to develop the nomogram.The nomogram was validated with a cohort of patients from the First Affiliated Hospital of the Army Medical University.RESULTS For overall and cancer-specific survival,12(sex,age,race,lymph node ratio,tumor size,chemotherapy,surgical modality,T stage,tumor differentiation,brain metastasis,lung metastasis,and extension)and 6(age;surveillance,epidemiology,and end results stage;lymph node ratio;chemotherapy;surgical modality;and tumor differentiation)independent risk factors,respectively,were incorporated into the nomogram.The area under the curve values at 1,3,and 5 years,respectively,were 0.807,0.842,and 0.826 for overall survival and 0.816,0.835,and 0.841 for cancer-specific survival.The internal and external validation cohorts indicated good consistency of the nomogram.CONCLUSION The dynamic nomogram offers robust predictive efficacy for the overall and cancer-specific survival of ampullary adenocarcinoma. 展开更多
关键词 Ampullary adenocarcinoma Dynamic nomogram Gastrointestinal tract SURVEILLANCE EPIDEMIOLOGY End results database Survival rate
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Spatial Modeling of COVID-19 Occurrence and Vaccination Rate across Counties in Ohio State from Jan. 2020 to April 2023
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作者 Olawale Oluwafemi Oluwaseun Ibukun +3 位作者 Yaw Kwarteng Kehinde Adebowale Yahaya Danjuma Samson Mela 《Journal of Geographic Information System》 2025年第1期80-96,共17页
The study aims to investigate county-level variations of the COVID-19 disease and vaccination rate. The COVID-19 data was acquired from usafact.org, and the vaccination records were acquired from the Ohio vaccination ... The study aims to investigate county-level variations of the COVID-19 disease and vaccination rate. The COVID-19 data was acquired from usafact.org, and the vaccination records were acquired from the Ohio vaccination tracker dashboard. GIS-based exploratory analysis was conducted to select four variables (poverty, black race, population density, and vaccination) to explain COVID-19 occurrence during the study period. Consequently, spatial statistical techniques such as Moran’s I, Hot Spot Analysis, Spatial Lag Model (SLM), and Spatial Error Model (SEM) were used to explain the COVID-19 occurrence and vaccination rate across the 88 counties in Ohio. The result of the Local Moran’s I analysis reveals that the epicenters of COVID-19 and vaccination followed the same patterns. Indeed, counties like Summit, Franklin, Fairfield, Hamilton, and Medina were categorized as epicenters for both COVID-19 occurrence and vaccination rate. The SEM seems to be the best model for both COVID-19 and vaccination rates, with R2 values of 0.68 and 0.70, respectively. The GWR analysis proves to be better than Ordinary Least Squares (OLS), and the distribution of R2 in the GWR is uneven throughout the study area for both COVID-19 cases and vaccinations. Some counties have a high R2 of up to 0.70 for both COVID-19 cases and vaccinations. The outcomes of the regression analyses show that the SEM models can explain 68% - 70% of COVID-19 cases and vaccination across the entire counties within the study period. COVID-19 cases and vaccination rates exhibited significant positive associations with black race and poverty throughout the study area. 展开更多
关键词 COVID-19 Prevalence COVID-19 Vaccination OHIO spatial Lag Model spatial Error Model
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Bombing Inequality:Graffiti Writing and Spatial Justice
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作者 Andrea L.Baldini 《文艺理论研究》 北大核心 2025年第4期165-178,共14页
This study contests the prevalent perception of graffiti writing,especially tagging and bombing,as meaningless vandalism.It contends that graffiti is a form of expression with intrinsic political implications.Leveragi... This study contests the prevalent perception of graffiti writing,especially tagging and bombing,as meaningless vandalism.It contends that graffiti is a form of expression with intrinsic political implications.Leveraging the notion of spatial justice and Jacques Ranciere's philosophy,I demonstrate how graffiti reclaims urban visibility against the commercial monopoly of visibility in public spaces and challenges the inequitable allocation of opportunities for self-expression in modern cities.Despite writers'common denial of political motives,their actions may be interpreted as manifestations of resistance within wider sociospatial conflicts.This study situates grffti within discussions of political art,spatial commodification,and everyday resistance,proposing a normative framework for viewing the art of the urban signature as an activity that redefines"the community that speaks." 展开更多
关键词 Graffiti writing spatial justice public space resistance Ranciere political art
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Constructing, Mapping, and Analyzing Global Urban Forest Databases Using Hyperlinks: A World of Vast Unevenness and Research Challenges
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作者 Stanley D. Brunn Olena Dronova Mahmuda Sharmin 《Natural Resources》 2025年第1期1-23,共23页
A distinctive feature of scholarly communities today is exploring topics and concepts in interdisciplinary and international contexts. This observation is increasingly apparent and visible in advancing our thinking an... A distinctive feature of scholarly communities today is exploring topics and concepts in interdisciplinary and international contexts. This observation is increasingly apparent and visible in advancing our thinking and policies related to human/environmental worlds at local, regional, and global scales. Maps are an important part of these innovative and ongoing research approaches. In this context, we consider urban forests a topic meriting more attention of scholars studying the geographic and environmental intersections of the natural sciences with the social sciences and humanities. We construct two innovative knowledge bases, one a conceptual framework based on major themes and concepts related to mapping urban forests using key words of the first 100 results of a Google Scholar query and a second using the number of Google Scholar hyperlinks about mapping urban forests in 244 capital cities. We discovered that the constructed world maps reveal vast global unevenness in our knowledge about urban forests in hyperlink numbers and ratios, results that merit further attention by disciplinary, international and interdisciplinary scholarly communities. 展开更多
关键词 Urban Forests database MAPPING Google Scholar HYPERLINKS DISPARITIES Unevenness
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Spatial transcriptomics combined with single-nucleus RNA sequencing reveals glial cell heterogeneity in the human spinal cord
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作者 Yali Chen Yiyong Wei +3 位作者 Jin Liu Tao Zhu Cheng Zhou Donghang Zhang 《Neural Regeneration Research》 SCIE CAS 2025年第11期3302-3316,共15页
Glial cells play crucial roles in regulating physiological and pathological functions,including sensation,the response to infection and acute injury,and chronic neurodegenerative disorders.Glial cells include astrocyt... Glial cells play crucial roles in regulating physiological and pathological functions,including sensation,the response to infection and acute injury,and chronic neurodegenerative disorders.Glial cells include astrocytes,microglia,and oligodendrocytes in the central nervous system,and satellite glial cells and Schwann cells in the peripheral nervous system.Despite the greater understanding of glial cell types and functional heterogeneity achieved through single-cell and single-nucleus RNA sequencing in animal models,few studies have investigated the transcriptomic profiles of glial cells in the human spinal cord.Here,we used high-throughput single-nucleus RNA sequencing and spatial transcriptomics to map the cellular and molecular heterogeneity of astrocytes,microglia,and oligodendrocytes in the human spinal cord.To explore the conservation and divergence across species,we compared these findings with those from mice.In the human spinal cord,astrocytes,microglia,and oligodendrocytes were each divided into six distinct transcriptomic subclusters.In the mouse spinal cord,astrocytes,microglia,and oligodendrocytes were divided into five,four,and five distinct transcriptomic subclusters,respectively.The comparative results revealed substantial heterogeneity in all glial cell types between humans and mice.Additionally,we detected sex differences in gene expression in human spinal cord glial cells.Specifically,in all astrocyte subtypes,the levels of NEAT1 and CHI3L1 were higher in males than in females,whereas the levels of CST3 were lower in males than in females.In all microglial subtypes,all differentially expressed genes were located on the sex chromosomes.In addition to sex-specific gene differences,the levels of MT-ND4,MT2A,MT-ATP6,MT-CO3,MT-ND2,MT-ND3,and MT-CO_(2) in all spinal cord oligodendrocyte subtypes were higher in females than in males.Collectively,the present dataset extensively characterizes glial cell heterogeneity and offers a valuable resource for exploring the cellular basis of spinal cordrelated illnesses,including chronic pain,amyotrophic lateral sclerosis,and multiple sclerosis. 展开更多
关键词 astrocyte glial cell HUMAN microglia oligodendrocyte sex differentiation single-nucleus RNA sequencing spatial transcriptomics species variation spinal cord
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Spatial Grasp Model for Distributed Management and Its Comparison With Traditional Algorithms
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作者 Peter Simon Sapaty 《International Relations and Diplomacy》 2025年第3期164-179,共16页
The word“spatial”fundamentally relates to human existence,evolution,and activity in terrestrial and even celestial spaces.After reviewing the spatial features of many areas,the paper describes basics of high level m... The word“spatial”fundamentally relates to human existence,evolution,and activity in terrestrial and even celestial spaces.After reviewing the spatial features of many areas,the paper describes basics of high level model and technology called Spatial Grasp for dealing with large distributed systems,which can provide spatial vision,awareness,management,control,and even consciousness.The technology description includes its key Spatial Grasp Language(SGL),self-evolution of recursive SGL scenarios,and implementation of SGL interpreter converting distributed networked systems into powerful spatial engines.Examples of typical spatial scenarios in SGL include finding shortest path tree and shortest path between network nodes,collecting proper information throughout the whole world,elimination of multiple targets by intelligent teams of chasers,and withstanding cyber attacks in distributed networked systems.Also this paper compares Spatial Grasp model with traditional algorithms,confirming universality of the former for any spatial systems,while the latter just tools for concrete applications. 展开更多
关键词 spatial awareness spatial control spatial consciousness spatial Grasp Technology spatial Grasp Language spatial scenarios cyber attacks distributed algorithms mobile agents
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Spatial correlation singularities and orbital angular momentum spectra of partially coherent beams with noncanonical vortex pairs
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作者 MEI Chao CHENG Ke +2 位作者 YI Xiao-wen FU Cai-ying ZENG Ti-xian 《中国光学(中英文)》 北大核心 2025年第5期1243-1254,共12页
By introducing noncanonical vortex pairs to partially coherent beams, spatial correlation singularity (SCS) and orbital angular momenta (OAM) of the resulting beams are studied using the Fraunhofer diffraction integra... By introducing noncanonical vortex pairs to partially coherent beams, spatial correlation singularity (SCS) and orbital angular momenta (OAM) of the resulting beams are studied using the Fraunhofer diffraction integral. The effect of noncanonical strength, off-axis distance and vortex sign on spatial correlation singularities in far field is stressed. Furthermore, far-field OAM spectra and densities are also investigated, and the OAM detection and crosstalk probabilities are discussed. The results show that the number of dislocations of SCS always equals the sum of absolute values of topological charges for canonical or noncanonical vortex pairs. Although the sum of the product of each OAM mode and its power weight equals the algebraic sum of topological charges for canonical vortex pairs, the relationship no longer holds in the noncanonical case except for opposite-charge vortex pairs. The changes of off-axis distance, noncanonical strength or coherence length can lead to a more dominant power in adjacent mode than that in center detection mode, which also indicates that crosstalk probabilities of adjacent modes exceed the center detection probability. This work may provide potential applications in OAM-based optical communication, imaging, sensing and computing. 展开更多
关键词 spatial correlation singularity orbital angular momentum noncanonical vortex partially coherent beam
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Concept of characteristics database alliance building:a case study of marine characteristic databases
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作者 ZHOU Li DONG Wenjing YANG Yi 《Marine Science Bulletin》 2025年第1期84-96,共13页
The characteristic databases in China face issues such as narrow resource coverage,low levels of standardization and normalization,and limited data sharing.To address these challenges,this paper proposes the concept o... The characteristic databases in China face issues such as narrow resource coverage,low levels of standardization and normalization,and limited data sharing.To address these challenges,this paper proposes the concept of characteristic databases alliance,using marine characteristic databases as a case for feasibility analysis and discussion.The paper outlines the development path for such alliances and offers recommendations for future growth,aiming to establish a collaborative platform for the development of characteristic databases. 展开更多
关键词 characteristic databases characteristic resources resource construction database alliance
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Best practice for developing integrative Chinese-Western medicine databases using electronic health records
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作者 REN Yan JIA Yulong +7 位作者 LIANG Wengxue XU Ye LIU Xuehong XIONG Yiquan JIANG Hao ZOU Kang SUN Xin TAN Jing 《World Journal of Integrated Traditional and Western Medicine》 2025年第3期174-186,共13页
Objectives:Electronic health records(EHRs)offer valuable real-world data(RWD)for Chinese medicine research.However,significant methodological challenges remain in developing integrative Chinese-Western medicine(ICWM)d... Objectives:Electronic health records(EHRs)offer valuable real-world data(RWD)for Chinese medicine research.However,significant methodological challenges remain in developing integrative Chinese-Western medicine(ICWM)databases.This study aims to establish a best-practice methodological framework,referred to as BRIDGE,to guide the construction of ICWM databases using EHRs.Methods:We developed the methodological framework through a comprehensive process,including systematic literature review,synthesis of empirical experiences,thematic expert discussions,and consultation with an external panel to reach consensus.Results:The BRIDGE framework outlines 6 core components for ICWM-EHR database development:Overall design,database architecture,data extraction and linkage,data governance,data verification,and data quality evaluation.Key data elements include variables related to study population,treatment or exposure,outcomes,and confounders.These databases support various research applications,particularly in evaluating the effectiveness and safety of integrative therapies.To demonstrate its practical value,we developed an ICWM-EHR database on women’s reproductive lifespan,encompassing 2,064,482 patients.This database captures women’s health conditions across the life course,from reproductive age to older adulthood.Conclusions:The BRIDGE methodological framework provides a standardized approach to building high-quality ICWM-EHR databases.It offers a unique opportunity to strengthen the methodological rigor and real-world relevance of Chinese medicine research in integrated healthcare settings. 展开更多
关键词 Chinese-Western medicine database Electronic health records Methodological framework database development Women’s reproductive health database
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