In protein sequence classification research, it is popular to convert a variable length sequence of protein into a fixed length numerical vector by using various descriptors, for instance, composition of k-mer composi...In protein sequence classification research, it is popular to convert a variable length sequence of protein into a fixed length numerical vector by using various descriptors, for instance, composition of k-mer composition. Such position-independent descriptors are useful since they are applicable to any length of sequence;however, positional information of subsequence is discarded even though it might have high contribution to classification performance. To solve this problem, we divided the original sequence into some segments, and then calculated the numerical features for them. It enables us to partially introduce positional information (for instance, compositions of serine in anterior and posterior segments of a sequence). Through comprehensive experiments on the number of segments and length of overlapping region, we found our classification approach with sequence segmentation and feature selection is effective to improve the performance. We evaluated our approach on three protein classification problems and achieved significant improvement in all cases which have a dataset with sufficient amino acid in each sequence. This result has shown the great potential of using additional segments in protein sequence classification to solve other sequence problems in bioinformatics.展开更多
To address the current issues of inaccurate segmentation and the limited applicability of segmentation methods for building facades in point clouds, we propose a facade segmentation algorithm based on optimal dual-sca...To address the current issues of inaccurate segmentation and the limited applicability of segmentation methods for building facades in point clouds, we propose a facade segmentation algorithm based on optimal dual-scale feature descriptors. First, we select the optimal dual-scale descriptors from a range of feature descriptors. Next, we segment the facade according to the threshold value of the chosen optimal dual-scale descriptors. Finally, we use RANSAC (Random Sample Consensus) to fit the segmented surface and optimize the fitting result. Experimental results show that, compared to commonly used facade segmentation algorithms, the proposed method yields more accurate segmentation results, providing a robust data foundation for subsequent 3D model reconstruction of buildings.展开更多
Because texture images cannot be directly processed by the gray level information of individual pixel,we propose a new texture descriptor which reflects the intensity distribution of the patch centered at each pixel.T...Because texture images cannot be directly processed by the gray level information of individual pixel,we propose a new texture descriptor which reflects the intensity distribution of the patch centered at each pixel.Then the general multiphase image segmentation model of Potts model is extended for texture segmentation by adding the region information of the texture descriptor.A fast numerical scheme based on the split Bregman method is designed to speed up the computational process.The algorithm is efficient,and both the texture descriptor and the characteristic functions can be implemented easily.Experiments using synthetic texture images,real natural scene images and synthetic aperture radar images are presented to give qualitative comparisons between our method and other state-of-the-art techniques.The results show that our method can accurately segment object regions and is competitive compared with other methods especially in segmenting natural images.展开更多
Contour is an important pattern descriptor in image processing and particularly in region description, registration and length estimation. In many applications where contour is used, a good segmentation and an efficie...Contour is an important pattern descriptor in image processing and particularly in region description, registration and length estimation. In many applications where contour is used, a good segmentation and an efficient smoothing method are needed. In X-ray images, such as mammograms, where object edge is not clearly discernible, estimating the object’s contour may yield substantial shift along the boundary due to noise or segmentation drawbacks. An appropriate smoothing is therefore required to reduce these effects. In this paper, an approach based on local adaptive threshold segmentation to extract contour and a new smoothing approach founded on Fourier descriptors are introduced. The experimental results of extraction obtained from a set of mammograms and compared with the breast regions delineated by radiologists yielded a percent overlap area of 98.7% ± 0.9% with false positive and negative rates of 0.36 ± 0.74 and 0.93 ± 0.44 respectively. The proposed method was tested on a set of images and improved the accuracy, leading to an average error of less than one pixel.展开更多
The recent boom of mass media communication (such as social media and mobiles) has boosted more applications of automatic facial expression recognition (FER). Thus, human facial expressions have to be encoded and reco...The recent boom of mass media communication (such as social media and mobiles) has boosted more applications of automatic facial expression recognition (FER). Thus, human facial expressions have to be encoded and recognized through digital devices. However, this process has to be done under recurrent problems of image illumination changes and partial occlusions. Therefore, in this paper, we propose a fully automated FER system based on Local Fourier Coefficients and Facial Fourier Descriptors. The combined power of appearance and geometric features is used for describing the specific facial regions of eyes-eyebrows, nose and mouth. All based on the attributes of the Fourier Transform and Support Vector Machines. Hence, our proposal overcomes FER problems such as illumination changes, partial occlusion, image rotation, redundancy and dimensionality reduction. Several tests were performed in order to demonstrate the efficiency of our proposal, which were evaluated using three standard databases: CK+, MUG and TFEID. In addition, evaluation results showed that the average recognition rate of each database reaches higher performance than most of the state-of-the-art techniques surveyed in this paper.展开更多
文摘In protein sequence classification research, it is popular to convert a variable length sequence of protein into a fixed length numerical vector by using various descriptors, for instance, composition of k-mer composition. Such position-independent descriptors are useful since they are applicable to any length of sequence;however, positional information of subsequence is discarded even though it might have high contribution to classification performance. To solve this problem, we divided the original sequence into some segments, and then calculated the numerical features for them. It enables us to partially introduce positional information (for instance, compositions of serine in anterior and posterior segments of a sequence). Through comprehensive experiments on the number of segments and length of overlapping region, we found our classification approach with sequence segmentation and feature selection is effective to improve the performance. We evaluated our approach on three protein classification problems and achieved significant improvement in all cases which have a dataset with sufficient amino acid in each sequence. This result has shown the great potential of using additional segments in protein sequence classification to solve other sequence problems in bioinformatics.
文摘To address the current issues of inaccurate segmentation and the limited applicability of segmentation methods for building facades in point clouds, we propose a facade segmentation algorithm based on optimal dual-scale feature descriptors. First, we select the optimal dual-scale descriptors from a range of feature descriptors. Next, we segment the facade according to the threshold value of the chosen optimal dual-scale descriptors. Finally, we use RANSAC (Random Sample Consensus) to fit the segmented surface and optimize the fitting result. Experimental results show that, compared to commonly used facade segmentation algorithms, the proposed method yields more accurate segmentation results, providing a robust data foundation for subsequent 3D model reconstruction of buildings.
基金supported by the National Natural Science Foundation of China(No.61170106)
文摘Because texture images cannot be directly processed by the gray level information of individual pixel,we propose a new texture descriptor which reflects the intensity distribution of the patch centered at each pixel.Then the general multiphase image segmentation model of Potts model is extended for texture segmentation by adding the region information of the texture descriptor.A fast numerical scheme based on the split Bregman method is designed to speed up the computational process.The algorithm is efficient,and both the texture descriptor and the characteristic functions can be implemented easily.Experiments using synthetic texture images,real natural scene images and synthetic aperture radar images are presented to give qualitative comparisons between our method and other state-of-the-art techniques.The results show that our method can accurately segment object regions and is competitive compared with other methods especially in segmenting natural images.
文摘Contour is an important pattern descriptor in image processing and particularly in region description, registration and length estimation. In many applications where contour is used, a good segmentation and an efficient smoothing method are needed. In X-ray images, such as mammograms, where object edge is not clearly discernible, estimating the object’s contour may yield substantial shift along the boundary due to noise or segmentation drawbacks. An appropriate smoothing is therefore required to reduce these effects. In this paper, an approach based on local adaptive threshold segmentation to extract contour and a new smoothing approach founded on Fourier descriptors are introduced. The experimental results of extraction obtained from a set of mammograms and compared with the breast regions delineated by radiologists yielded a percent overlap area of 98.7% ± 0.9% with false positive and negative rates of 0.36 ± 0.74 and 0.93 ± 0.44 respectively. The proposed method was tested on a set of images and improved the accuracy, leading to an average error of less than one pixel.
文摘The recent boom of mass media communication (such as social media and mobiles) has boosted more applications of automatic facial expression recognition (FER). Thus, human facial expressions have to be encoded and recognized through digital devices. However, this process has to be done under recurrent problems of image illumination changes and partial occlusions. Therefore, in this paper, we propose a fully automated FER system based on Local Fourier Coefficients and Facial Fourier Descriptors. The combined power of appearance and geometric features is used for describing the specific facial regions of eyes-eyebrows, nose and mouth. All based on the attributes of the Fourier Transform and Support Vector Machines. Hence, our proposal overcomes FER problems such as illumination changes, partial occlusion, image rotation, redundancy and dimensionality reduction. Several tests were performed in order to demonstrate the efficiency of our proposal, which were evaluated using three standard databases: CK+, MUG and TFEID. In addition, evaluation results showed that the average recognition rate of each database reaches higher performance than most of the state-of-the-art techniques surveyed in this paper.
