Fusarium crown rot(FCR),predominantly caused by Fusarium pseudograminearum,has been listed as a Category Ⅱ disease in six provinces of China,posing a significant threat to wheat production.The phenylpyrrole fungicide...Fusarium crown rot(FCR),predominantly caused by Fusarium pseudograminearum,has been listed as a Category Ⅱ disease in six provinces of China,posing a significant threat to wheat production.The phenylpyrrole fungicide fludioxonil is a key agent for FCR control.Previous studies indicated that resistance to fludioxonil in F.pseudograminearum is primarily associated with altered expression levels of the FpOS1 gene,which encodes a hybrid histidine kinase.However,the roles of mutations in other FpOS genes and the molecular interactions between FpOS proteins and fludioxonil remain elusive.To address these gaps,we generated 16 fludioxonil-resistant mutants with heritable resistance traits by in vitro selection of four sensitive F.pseudograminearum isolates.These mutants exhibited high resistance levels,with resistance factors(RF)ranging from 633.73 to 8617.07.Compared to their parental isolates,the resistant mutants showed significantly reduced mycelial growth rate,sporulation capacity,and pathogenicity.They were also more sensitive to ionic,osmotic,and oxidative stresses and displayed compromised cell wall and membrane integrity.Fludioxonil demonstrated no cross-resistance with tebuconazole or pydiflumetofen;however,it exhibited weak positive crossresistance to pyraclostrobin and moderate positive cross-resistance to iprodione.Fludioxonil treatment significantly promoted glycerol synthesis and inhibited deoxynivalenol(DON)production in parental isolates,whereas these regulatory effects were markedly attenuated in the resistant mutants.Mutation analysis identified mutation sites in FpOS1,FpOS4,and FpOS5 genes,with a lower mutation frequency in FpOS1 and no mutations detected in FpOS2.Molecular docking indicated that amino acid substitutions in FpOS4 and FpOS5 significantly reduced the binding affinity of fludioxonil to these target proteins.In conclusion,F.pseudograminearum poses a moderate risk of resistance to fludioxonil.Point mutations in FpOS4 and FpOS5 genes emerge as key molecular drivers of resistance,likely by diminishing the binding affinity between the fungicide and its proteins.This study clarifies the molecular basis of fludioxonil resistance in F.pseudograminearum and provides a scientific rationale for the judicious use of this fungicide in managing FCR.展开更多
Soybean(Glycine max L.)is a globally vital crop for oil production and food security.High-quality genomic resources are instrumental for both functional genomics and breeding.Here,we report a near-complete,high-qualit...Soybean(Glycine max L.)is a globally vital crop for oil production and food security.High-quality genomic resources are instrumental for both functional genomics and breeding.Here,we report a near-complete,high-quality genome assembly of the elite cultivar Tianlong 1(TL1),featuring fully resolved telomeres and centromeres,as well as a gap-free assembly of 14 of its 20 chromosomes.On the basis of the genome assembly,we generate an ethyl methanesulfonate(EMS)-mutagenized population comprising 2555 M7 plants.Whole-genome resequencing of 288 EMS mutants uncovers 1,163,869 high-confidence single-nucleotide polymorphisms(SNPs)and 542,709 insertions/deletions(InDels),achieving 91.89%coverage of predicted protein-coding genes.Phenotypic screening demonstrates robust genotype–phenotype associations,with two nonsynonymous mutants displaying pronounced defects in seed and leaf development.Collectively,the chromosome-scale TL1 genome assembly and the extensively characterized mutant population establish valuable resources for functional genomics and precision breeding in soybean and related legume species.展开更多
Oviposition behavior in insects has received considerable attention,but studies have mainly focused on the antennae,neglecting the role of the ovipositor.In this study,we investigated the functional characteristics of...Oviposition behavior in insects has received considerable attention,but studies have mainly focused on the antennae,neglecting the role of the ovipositor.In this study,we investigated the functional characteristics of the ovipositor in oviposition site selection by the fall armyworm(FAW)Spodoptera frugiperda,a destructive invasive pest of maize and other cereals.In oviposition choice assays females exhibited significant repellency to isothiocyanate(ITC),volatiles specific to non-preferred cruciferous plants.Females retained repellency to ITC or attraction to maize volatiles even after antennae removal.Scanning electron microscopy indicated the presence of olfactory-associated sensilla on the ovipositor.Comparative transcriptome analysis and in vitro functional studies showed that S.frugiperda odorant binding protein 30(SfruOBP30),exclusively expressed in the ovipositor,displayed a broad sensitivity toward 18 maize volatiles and 10 ITC compounds.Site-directed mutant assay revealed that Ser71 and Ser85 were the key binding sites for SfruOBP30 interacting with ITCs and key maize volatiles,respectively.Silencing the expression of SfruOBP30 resulted in the loss of bias in oviposition of FAW,significantly inhibiting their ability to avoid ITCs and locate the maize substrate.Overall,we propose that the ovipositor does not just seek out advantageous conditions for immature stages but more importantly,avoids potential risks during the oviposition process.Apparently,the involvement of SfruOBP30 plays a critical role in detecting both beneficial and harmful substances during this intricate process.展开更多
With the increasing accumulation of plastic pollutants in various environments,research on microorganisms(including bacteria,fungi,and algae)with plastic degradation capabilities has gained significant attention.Howev...With the increasing accumulation of plastic pollutants in various environments,research on microorganisms(including bacteria,fungi,and algae)with plastic degradation capabilities has gained significant attention.However,only a limited number of microbial plastic-degrading enzymes have been identified to date.This highlights that the degradation mechanisms employed by many plastic-degrading microorganisms,particularly filamentous fungi,remain insufficiently explored.In this study,we utilized a versatile fungal plasmid(pCT74)to express green fluorescent protein(GFP)in a marine-derived fungus Alternaria alternata strain FB1 with plastic degradation capabilities.Upon evaluating the degradation effect of polyester-type polyurethane(PU)film,we observed that different transformants exhibited three kinds of activities(the same,reduced,or enhanced degradation capability)compared to the FB1 wild-type strain.Further analysis of the plasmid fragment insertion sites in different transformants revealed that pCT74 integrates randomly into the genome of the host fungus.Notably,a direct correlation was found between the plasmid insertion site and the degradation capability of the corresponding transformant.Our findings not only redefine the potential applications of plasmid pCT74 in filamentous fungi but also show a novel research approach to identifying key enzymes involved in plastic degradation by fungi.展开更多
OsMAPK6 plays a critical role in regulating rice growth,development,and stress responses.However,the embryonic lethality associated with loss-of-function mutations prevents the generation of homozygous mutant seeds,si...OsMAPK6 plays a critical role in regulating rice growth,development,and stress responses.However,the embryonic lethality associated with loss-of-function mutations prevents the generation of homozygous mutant seeds,significantly hindering functional studies of this gene.Although the weak mutant dsg1 has offered valuable insights into OsMAPK6 function,its extremely low seed-setting rate limits its use for detailed genetic analysis.Here,we employed prime editing to perform precise multi-site modifications at the C-terminus of OsMAPK6,generating a series of osmapk6 mutants with truncated proteins of varying lengths.Among these,the osmapk6(379)and osmapk6(383)mutants exhibited phenotypic defects similar to dsg1,while osmapk6(386)showed a significantly improved seed-setting rate despite persistent developmental defects.Through phenotypic characterization and protein functional analysis,we further clarified how different C-terminal deletion lengths affect plant growth,development,stress responses,and OsMAPK6 protein function.In summary,this study elucidates the importance of the OsMAPK6 C-terminus in rice biology and provides a fertile weak mutant with enhanced seed production,offering a valuable genetic resource for future research on OsMAPK6.展开更多
KRAS is a critical proto-oncogene and molecular switch that is frequently mutated in human cancers.Oncogenic mutations,primarily at codons 12,13,and 61,lock KRAS into a GTPbound active state,thus resulting in constitu...KRAS is a critical proto-oncogene and molecular switch that is frequently mutated in human cancers.Oncogenic mutations,primarily at codons 12,13,and 61,lock KRAS into a GTPbound active state,thus resulting in constitutive signaling through downstream effectors such as RAF and phosphoinositide 3-kinase(PI3K)1.These alterations are highly prevalent in pancreatic cancer,colorectal cancer(CRC),and non-small cell lung cancer(NSCLC),and they drive tumor initiation,progression,and therapy resistance.展开更多
The tea plant cultivar‘Zhonghuang 2'(ZH2)possesses albino-induced yellow leaves that contain low levels of catechins but high contents of amino acids.However,the molecular mechanism underlying the yellow leaf phe...The tea plant cultivar‘Zhonghuang 2'(ZH2)possesses albino-induced yellow leaves that contain low levels of catechins but high contents of amino acids.However,the molecular mechanism underlying the yellow leaf phenotype of ZH2 has not been elucidated clearly.In the current research,the yellow shoots(ZH2-Y)and naturally converted green shoots(ZH2-G)of ZH2 were studied using metabolic and proteomic profiling for a better understanding of the mechanism underlying phenotype formation.In total,107 differentially changed metabolites(DCMs)were identified from the GC-MS-based metabolomics,and 189 differentially accumulated proteins(DAPs)were identified from the tandem mass tag(TMT)-based quantitative proteomics.Subsequently,integrated analysis revealed that‘porphyrin and chlorophyll metabolism',‘carbon fixation in photosynthetic organisms',and‘phenylpropanoid biosynthesis'pathways were commonly enriched for DAPs and DCMs.We further found that the inhibition of chlorophyll biosynthesis,the deficiency of photosynthetic proteins and the imbalance of the ROS-scavenging system were the crucial reasons responsible for the chlorosis,chloroplast abnormality and photooxidative damage of ZH2 leaves.Altogether,our research combines metabolomics and proteomics approaches to uncover the molecular mechanism leading to the yellow leaf phenotype of tea plants.展开更多
Approximately half of all cancers have p53 inactivating mutations,in addition to which most malignancies inactivate the p53 pathway by increasing p53 inhibitors,decreasing p53 activators,or inactivating p53 downstream...Approximately half of all cancers have p53 inactivating mutations,in addition to which most malignancies inactivate the p53 pathway by increasing p53 inhibitors,decreasing p53 activators,or inactivating p53 downstream targets.A growing number of researches have demonstrated that p53 can influence tumor progression through the tumor microenvironment(TME).TME is involved in the process of tumor development and metastasis and affects the clinical prognosis of patients.p53 participates in host immunity and engages in the immune landscape of the TME,but the specific mechanisms remain to be investigated.This review briefly explores the interactions between different states of p53 and TME components and their mechanisms,as well as their effects on tumor progression.To understand the progress of drug development and clinical studies related to p53 and tumor microenvironment.展开更多
CRISPR-Cas9 has emerged as a powerful tool for gene editing,and it has been widely used in plant functional genomics research and crop genetic breeding(Chen et al.2019).The target specificity of CRISPR-Cas9 relies on ...CRISPR-Cas9 has emerged as a powerful tool for gene editing,and it has been widely used in plant functional genomics research and crop genetic breeding(Chen et al.2019).The target specificity of CRISPR-Cas9 relies on the 20-base-pair single guide RNA(sgRNA),which makes creating plant-specific mutant libraries through large-scale synthesis of sgRNAs targeting multiple genes or even the whole genome relatively quick and straightforward.展开更多
Phytic acid(PA), or myo-inositol 1,2,3,4,5,6-hexakisphosphate, is the main storage form of phosphorus(P) in seeds, accounting for 65% to 85% of their total P content. The negative charge of PA attracts metal cations, ...Phytic acid(PA), or myo-inositol 1,2,3,4,5,6-hexakisphosphate, is the main storage form of phosphorus(P) in seeds, accounting for 65% to 85% of their total P content. The negative charge of PA attracts metal cations, forming insoluble salts called phytates. These phytates, contain six negatively charged ions, can bind divalent cations such as Fe^(2+), Zn^(2+), Mg^(2+), and Ca^(2+), preventing their absorption in monogastric animals. To overcome P deficiency in non-ruminants, phytase is usually given as a supplement, which then results in excess P excretion, leading to environmental problems such as eutrophication. Improved fertilizer management, food processing techniques, and the development of low-PA crops through plant breeding are envisioned as effective ways to improve P-utilization and lessen the environmental impact while minimizing the effect of PA. A better understanding of the molecular and physiological basis of PA biosynthesis, grain PA distribution, the effects of genetic and environmental factors on PA accumulation, and methods to increase micronutrient bioavailability by lowering the effects of PA is essential for developing low-PA crops.展开更多
Naturally occurring yellow leaf mutants are an important resource for studying pigment content and biosynthesis,as well as related gene expression.In our ongoing cultivation of Rehmannia chingii H.L.Li,we found an off...Naturally occurring yellow leaf mutants are an important resource for studying pigment content and biosynthesis,as well as related gene expression.In our ongoing cultivation of Rehmannia chingii H.L.Li,we found an off-type yellow plant.The yellowing started with the new leaves and gradually spread downward until the entire plant exhibited a stable shade of yellow.We studied the differences in the chlorophyll and carotenoid content,carotenoid profile,and transcriptome of this yellow-leaf mutant(P2).Compared to the wild-type R.chingii plant(P1),P2 leaves had significantly lower chlorophyll and carotenoid content.LC-MS/MS analysis revealed that P2 had higher quantities of severalmetabolites in the carotenoid biosynthesis pathway.Transcriptome sequencing results showed that genes involved in porphyrin metabolism,carbon fixation,photosynthesis and antenna proteins,terpenoid backbone biosynthesis,and carotenoid biosynthesis were differentially expressed between P1 and P2.Large-scale expression differences were observed in the phytohormone and MAPK signaling pathways,as well as in 15 transcription factor families.We discuss possible mechanisms responsible for the yellowleaf color in P2.These preliminary data are valuable for further exploring the molecular mechanisms of leaf color formation and associated pathways.展开更多
Magnaporthe oryzae,the causal agent of rice blast,induces significant upregulation of OsPR10b,a pathogenesis-related(PR)pollen allergen(BetV-1)family gene.To investigate its role in immunity,we generated OsPR10b knock...Magnaporthe oryzae,the causal agent of rice blast,induces significant upregulation of OsPR10b,a pathogenesis-related(PR)pollen allergen(BetV-1)family gene.To investigate its role in immunity,we generated OsPR10b knockout mutants in the Zhonghua 11(ZH11)background.OsPR10b was predominantly expressed in rice calli and strongly induced by M.oryzae infection.Knockout mutants(ospr10b-1 and ospr10b-2)exhibited heightened susceptibility to both M.oryzae and Xanthomonas oryzae pv.oryzae(Xoo),demonstrating that OsPR10b positively regulates resistance to blast and bacterial blight.Our findings elucidate OsPR10b’s role in rice immunity and provide genetic resources for disease-resistant breeding.展开更多
Leaf color mutants (LCMs) provide crucial insights into the regulatory mechanisms underlying chloroplast development,photo synthesis,and stre ss adaptation.In this study,we identified a temperature-sensitive albino mu...Leaf color mutants (LCMs) provide crucial insights into the regulatory mechanisms underlying chloroplast development,photo synthesis,and stre ss adaptation.In this study,we identified a temperature-sensitive albino mutant,tsa4,characterized by an albino phenotype at the seedling stage and abnormal chloroplast development at temperatures below 25℃.展开更多
Aerial organs in rice,including leaves,stems,and grains,are crucial for photosynthesis,lodging resistance,and yield.Therefore,an in-depth study on the development of these organs can lay a foundation for achieving hig...Aerial organs in rice,including leaves,stems,and grains,are crucial for photosynthesis,lodging resistance,and yield.Therefore,an in-depth study on the development of these organs can lay a foundation for achieving high and stable rice yields.In this study,we isolated a novel slender aerial organ mutant sao,which is characterized by a significant reduction in the width of leaves,stems,and grains.Histological analysis revealed that the slender phenotype of aerial organs in sao is caused by impaired cell proliferation and elongation.展开更多
Global warming poses a severe threat to rice production and food security.We identified a heat-sensitive mutant hs1 through largescale screening of an established rice mutant library,and subsequently cloned the corres...Global warming poses a severe threat to rice production and food security.We identified a heat-sensitive mutant hs1 through largescale screening of an established rice mutant library,and subsequently cloned the corresponding gene HS1,which confers thermotolerance in rice.HS1 is localized to the chloroplast and functions by preserving chloroplast integrity under elevated temperatures through stabilizing the photosystem I subunit protein PsaC.Loss of HS1 function in the hs1 mutant leads to severe structural damage to the chloroplast under heat stress,accompanied by intracellular accumulation of reactive oxygen species(ROS),which in turn triggers DNA damage and leaf albinism,ultimately manifesting as a heat-sensitive phenotype.展开更多
Tiller number is a crucial agronomic trait for achieving high yield in rice.NAC proteins play critical roles in regulating plant growth and development.However,the role of NAC transcription factors in regulating tille...Tiller number is a crucial agronomic trait for achieving high yield in rice.NAC proteins play critical roles in regulating plant growth and development.However,the role of NAC transcription factors in regulating tiller number remains poorly understood.In this study,we isolated a rice NAC gene,OsNAC022,which is conserved in cereal crops and functions as a transcriptional activator.To investigate the role of this gene in rice,we used CRISPR/Cas9 technology to generate a homozygous mutant named CR-osnac022,which exhibited increased tiller number.展开更多
Background:Innovative oral targeted therapies are warranted for patients with human epidermal growth factor receptor 2(HER2)-mutant non-small-cell lung cancer(NSCLC).Zongertinib is an oral,irreversible,HER2-selective ...Background:Innovative oral targeted therapies are warranted for patients with human epidermal growth factor receptor 2(HER2)-mutant non-small-cell lung cancer(NSCLC).Zongertinib is an oral,irreversible,HER2-selective tyrosine kinase inhibitor that has been shown to have efficacy in persons with advanced or metastatic solid tumors with HER2 alterations in a phase 1 study.展开更多
Chloroplasts are essential for normal plant growth and development.In plants,pentatricopeptide repeat(PPR)proteins mediate RNA processing in chloroplasts.Here,we characterized a rice albino leaf 5(al5)mutant which exh...Chloroplasts are essential for normal plant growth and development.In plants,pentatricopeptide repeat(PPR)proteins mediate RNA processing in chloroplasts.Here,we characterized a rice albino leaf 5(al5)mutant which exhibits albinism during early leaf development.The MutMap+analysis and transformation experiments revealed that AL5 encodes a chloroplast-localized P-type PPR protein.The AL5 mutation resulted in the defective splicing of ribosomal protein L2(rpl2)and ribosomal protein S12(rps12),which are involved in the synthesis of chloroplast 50S and 30S ribosomal subunits,respectively.The RNA-electrophoretic mobility shift assay(REMSA)further demonstrated that AL5 directly binds to rpl2 transcripts.Finally,disruption of AL5 led to reduced expression of plastid-encoded polymerase(PEP)-dependent plastid genes and nuclear-encoded photosynthetic genes.Notably,the albino al5 mutant phenotype was regulated by low temperature.These results suggest that AL5 participates in plastid RNA splicing and plays an important role in chloroplast development in rice.展开更多
A high yielding rice mutant ( Oryza sativa L. cv. Zhenhui 249) with low chlorophyll b was recently discovered in the field. The mutant was mainly characterized by the decrease of the content of extrinsic antennae c...A high yielding rice mutant ( Oryza sativa L. cv. Zhenhui 249) with low chlorophyll b was recently discovered in the field. The mutant was mainly characterized by the decrease of the content of extrinsic antennae complex. This variation was shown in the stage when the leaves were expanding. When the leaves are at the final developmental stage, the content would approach to that of the wild type. It was discovered that only moderate amount of chlorophyll b decreased in this mutant. The photosynthetic apparatus of the mutant was rather stable in the whole life span of the leaf. The extrinsic antennae complex of the mutant might make efficient use of light and meanwhile reduce the production of O -· 2.展开更多
基金Supported by Funding from the Henan Provincial Scientific and Technological Breakthrough Project(No.242102111113).
文摘Fusarium crown rot(FCR),predominantly caused by Fusarium pseudograminearum,has been listed as a Category Ⅱ disease in six provinces of China,posing a significant threat to wheat production.The phenylpyrrole fungicide fludioxonil is a key agent for FCR control.Previous studies indicated that resistance to fludioxonil in F.pseudograminearum is primarily associated with altered expression levels of the FpOS1 gene,which encodes a hybrid histidine kinase.However,the roles of mutations in other FpOS genes and the molecular interactions between FpOS proteins and fludioxonil remain elusive.To address these gaps,we generated 16 fludioxonil-resistant mutants with heritable resistance traits by in vitro selection of four sensitive F.pseudograminearum isolates.These mutants exhibited high resistance levels,with resistance factors(RF)ranging from 633.73 to 8617.07.Compared to their parental isolates,the resistant mutants showed significantly reduced mycelial growth rate,sporulation capacity,and pathogenicity.They were also more sensitive to ionic,osmotic,and oxidative stresses and displayed compromised cell wall and membrane integrity.Fludioxonil demonstrated no cross-resistance with tebuconazole or pydiflumetofen;however,it exhibited weak positive crossresistance to pyraclostrobin and moderate positive cross-resistance to iprodione.Fludioxonil treatment significantly promoted glycerol synthesis and inhibited deoxynivalenol(DON)production in parental isolates,whereas these regulatory effects were markedly attenuated in the resistant mutants.Mutation analysis identified mutation sites in FpOS1,FpOS4,and FpOS5 genes,with a lower mutation frequency in FpOS1 and no mutations detected in FpOS2.Molecular docking indicated that amino acid substitutions in FpOS4 and FpOS5 significantly reduced the binding affinity of fludioxonil to these target proteins.In conclusion,F.pseudograminearum poses a moderate risk of resistance to fludioxonil.Point mutations in FpOS4 and FpOS5 genes emerge as key molecular drivers of resistance,likely by diminishing the binding affinity between the fungicide and its proteins.This study clarifies the molecular basis of fludioxonil resistance in F.pseudograminearum and provides a scientific rationale for the judicious use of this fungicide in managing FCR.
基金supported by the National Natural Science Foundation of China(31970344)Joint Funds of the Natural Science Foundation of Hainan Province,China(2021JJLH0065).
文摘Soybean(Glycine max L.)is a globally vital crop for oil production and food security.High-quality genomic resources are instrumental for both functional genomics and breeding.Here,we report a near-complete,high-quality genome assembly of the elite cultivar Tianlong 1(TL1),featuring fully resolved telomeres and centromeres,as well as a gap-free assembly of 14 of its 20 chromosomes.On the basis of the genome assembly,we generate an ethyl methanesulfonate(EMS)-mutagenized population comprising 2555 M7 plants.Whole-genome resequencing of 288 EMS mutants uncovers 1,163,869 high-confidence single-nucleotide polymorphisms(SNPs)and 542,709 insertions/deletions(InDels),achieving 91.89%coverage of predicted protein-coding genes.Phenotypic screening demonstrates robust genotype–phenotype associations,with two nonsynonymous mutants displaying pronounced defects in seed and leaf development.Collectively,the chromosome-scale TL1 genome assembly and the extensively characterized mutant population establish valuable resources for functional genomics and precision breeding in soybean and related legume species.
基金funded by National Key R&D Program of China(2021YFD1400703)Young Talent Support Project of Guangzhou Association for Science and Technology(QT2024-020).
文摘Oviposition behavior in insects has received considerable attention,but studies have mainly focused on the antennae,neglecting the role of the ovipositor.In this study,we investigated the functional characteristics of the ovipositor in oviposition site selection by the fall armyworm(FAW)Spodoptera frugiperda,a destructive invasive pest of maize and other cereals.In oviposition choice assays females exhibited significant repellency to isothiocyanate(ITC),volatiles specific to non-preferred cruciferous plants.Females retained repellency to ITC or attraction to maize volatiles even after antennae removal.Scanning electron microscopy indicated the presence of olfactory-associated sensilla on the ovipositor.Comparative transcriptome analysis and in vitro functional studies showed that S.frugiperda odorant binding protein 30(SfruOBP30),exclusively expressed in the ovipositor,displayed a broad sensitivity toward 18 maize volatiles and 10 ITC compounds.Site-directed mutant assay revealed that Ser71 and Ser85 were the key binding sites for SfruOBP30 interacting with ITCs and key maize volatiles,respectively.Silencing the expression of SfruOBP30 resulted in the loss of bias in oviposition of FAW,significantly inhibiting their ability to avoid ITCs and locate the maize substrate.Overall,we propose that the ovipositor does not just seek out advantageous conditions for immature stages but more importantly,avoids potential risks during the oviposition process.Apparently,the involvement of SfruOBP30 plays a critical role in detecting both beneficial and harmful substances during this intricate process.
基金Supported by the Science and Technology Innovation Project of Laoshan Laboratory(Nos.2022QNLM030004-3,LSKJ202203103)the NSFC Innovative Group Grant(No.42221005)+5 种基金the Key Collaborative Research Program of the Alliance of International Science Organizations(No.ANSO-CR-KP-2022-08)the Shandong Provincial Natural Science Foundation(No.ZR2021ZD28)the Major Research Plan of the National Natural Science Foundation(No.92351301)the Strategic Priority Research Program of the Chinese Academy of Sciences(No.XDA22050301)the Taishan Scholars Program(No.tstp20230637)the Qingdao Natural Science Foundation(No.23-2-1-182-zyyd-jch)。
文摘With the increasing accumulation of plastic pollutants in various environments,research on microorganisms(including bacteria,fungi,and algae)with plastic degradation capabilities has gained significant attention.However,only a limited number of microbial plastic-degrading enzymes have been identified to date.This highlights that the degradation mechanisms employed by many plastic-degrading microorganisms,particularly filamentous fungi,remain insufficiently explored.In this study,we utilized a versatile fungal plasmid(pCT74)to express green fluorescent protein(GFP)in a marine-derived fungus Alternaria alternata strain FB1 with plastic degradation capabilities.Upon evaluating the degradation effect of polyester-type polyurethane(PU)film,we observed that different transformants exhibited three kinds of activities(the same,reduced,or enhanced degradation capability)compared to the FB1 wild-type strain.Further analysis of the plasmid fragment insertion sites in different transformants revealed that pCT74 integrates randomly into the genome of the host fungus.Notably,a direct correlation was found between the plasmid insertion site and the degradation capability of the corresponding transformant.Our findings not only redefine the potential applications of plasmid pCT74 in filamentous fungi but also show a novel research approach to identifying key enzymes involved in plastic degradation by fungi.
基金supported by the National Natural Science Foundation of China(Grant Nos.32441024,32572315,and U25A20674)the Youth Innovation Promotion Association of Chinese Academy of Sciences(Grant No.2021229)+1 种基金the Heilongjiang Key Research and Development Program,China(Grant No.2025ZX04B02)the Young Scientist Group Project of Northeast Institute of Geography and Agroecology,Chinese Academy of Sciences(Grant No.2023QNXZ02).
文摘OsMAPK6 plays a critical role in regulating rice growth,development,and stress responses.However,the embryonic lethality associated with loss-of-function mutations prevents the generation of homozygous mutant seeds,significantly hindering functional studies of this gene.Although the weak mutant dsg1 has offered valuable insights into OsMAPK6 function,its extremely low seed-setting rate limits its use for detailed genetic analysis.Here,we employed prime editing to perform precise multi-site modifications at the C-terminus of OsMAPK6,generating a series of osmapk6 mutants with truncated proteins of varying lengths.Among these,the osmapk6(379)and osmapk6(383)mutants exhibited phenotypic defects similar to dsg1,while osmapk6(386)showed a significantly improved seed-setting rate despite persistent developmental defects.Through phenotypic characterization and protein functional analysis,we further clarified how different C-terminal deletion lengths affect plant growth,development,stress responses,and OsMAPK6 protein function.In summary,this study elucidates the importance of the OsMAPK6 C-terminus in rice biology and provides a fertile weak mutant with enhanced seed production,offering a valuable genetic resource for future research on OsMAPK6.
基金supported by the National Natural Science Foundation of China(Grant Nos.82472677,82404653,U25A20103,and 223B2704)the Natural Science Foundation of Shanghai(Grant No.23ZR1418900)the Natural Science Foundation of Chongqing(Grant No.CSTB2023NSCQ-MSX0367).
文摘KRAS is a critical proto-oncogene and molecular switch that is frequently mutated in human cancers.Oncogenic mutations,primarily at codons 12,13,and 61,lock KRAS into a GTPbound active state,thus resulting in constitutive signaling through downstream effectors such as RAF and phosphoinositide 3-kinase(PI3K)1.These alterations are highly prevalent in pancreatic cancer,colorectal cancer(CRC),and non-small cell lung cancer(NSCLC),and they drive tumor initiation,progression,and therapy resistance.
基金supported by the Project for Collaborative Promotion of Agricultural Major Technology of Zhejiang Province(Grant No.2022XTTGCY01-02)the National Natural Science Foundation of China(Grant Nos.31700615,32172633)+1 种基金the China Agriculture Research System of MOF and MARA(Grant No.CARS19-01A)the Special Project of Zhejiang Province(Grant No.2020R52036)。
文摘The tea plant cultivar‘Zhonghuang 2'(ZH2)possesses albino-induced yellow leaves that contain low levels of catechins but high contents of amino acids.However,the molecular mechanism underlying the yellow leaf phenotype of ZH2 has not been elucidated clearly.In the current research,the yellow shoots(ZH2-Y)and naturally converted green shoots(ZH2-G)of ZH2 were studied using metabolic and proteomic profiling for a better understanding of the mechanism underlying phenotype formation.In total,107 differentially changed metabolites(DCMs)were identified from the GC-MS-based metabolomics,and 189 differentially accumulated proteins(DAPs)were identified from the tandem mass tag(TMT)-based quantitative proteomics.Subsequently,integrated analysis revealed that‘porphyrin and chlorophyll metabolism',‘carbon fixation in photosynthetic organisms',and‘phenylpropanoid biosynthesis'pathways were commonly enriched for DAPs and DCMs.We further found that the inhibition of chlorophyll biosynthesis,the deficiency of photosynthetic proteins and the imbalance of the ROS-scavenging system were the crucial reasons responsible for the chlorosis,chloroplast abnormality and photooxidative damage of ZH2 leaves.Altogether,our research combines metabolomics and proteomics approaches to uncover the molecular mechanism leading to the yellow leaf phenotype of tea plants.
基金supported by the Natural Science Foundation of Hunan Province(No.2021JJ30589)Hunan Provincial Natural Science Foundation Sector Joint Fund(No.2023JJ60049).
文摘Approximately half of all cancers have p53 inactivating mutations,in addition to which most malignancies inactivate the p53 pathway by increasing p53 inhibitors,decreasing p53 activators,or inactivating p53 downstream targets.A growing number of researches have demonstrated that p53 can influence tumor progression through the tumor microenvironment(TME).TME is involved in the process of tumor development and metastasis and affects the clinical prognosis of patients.p53 participates in host immunity and engages in the immune landscape of the TME,but the specific mechanisms remain to be investigated.This review briefly explores the interactions between different states of p53 and TME components and their mechanisms,as well as their effects on tumor progression.To understand the progress of drug development and clinical studies related to p53 and tumor microenvironment.
基金supported by the National Natural Science Foundation of China(32272670 and 31972986)the Key Research and Development Program of Shaanxi Province,China(2023-YBNY-059)。
文摘CRISPR-Cas9 has emerged as a powerful tool for gene editing,and it has been widely used in plant functional genomics research and crop genetic breeding(Chen et al.2019).The target specificity of CRISPR-Cas9 relies on the 20-base-pair single guide RNA(sgRNA),which makes creating plant-specific mutant libraries through large-scale synthesis of sgRNAs targeting multiple genes or even the whole genome relatively quick and straightforward.
文摘Phytic acid(PA), or myo-inositol 1,2,3,4,5,6-hexakisphosphate, is the main storage form of phosphorus(P) in seeds, accounting for 65% to 85% of their total P content. The negative charge of PA attracts metal cations, forming insoluble salts called phytates. These phytates, contain six negatively charged ions, can bind divalent cations such as Fe^(2+), Zn^(2+), Mg^(2+), and Ca^(2+), preventing their absorption in monogastric animals. To overcome P deficiency in non-ruminants, phytase is usually given as a supplement, which then results in excess P excretion, leading to environmental problems such as eutrophication. Improved fertilizer management, food processing techniques, and the development of low-PA crops through plant breeding are envisioned as effective ways to improve P-utilization and lessen the environmental impact while minimizing the effect of PA. A better understanding of the molecular and physiological basis of PA biosynthesis, grain PA distribution, the effects of genetic and environmental factors on PA accumulation, and methods to increase micronutrient bioavailability by lowering the effects of PA is essential for developing low-PA crops.
基金funded by the Beijing Gardening andGreeningYouth InnovationTalent Support Program(kjcx202336)theKey R&D Project of theOpen Subject of the Beijing Key Laboratory for Greening Plant Breeding(YZZD202403).
文摘Naturally occurring yellow leaf mutants are an important resource for studying pigment content and biosynthesis,as well as related gene expression.In our ongoing cultivation of Rehmannia chingii H.L.Li,we found an off-type yellow plant.The yellowing started with the new leaves and gradually spread downward until the entire plant exhibited a stable shade of yellow.We studied the differences in the chlorophyll and carotenoid content,carotenoid profile,and transcriptome of this yellow-leaf mutant(P2).Compared to the wild-type R.chingii plant(P1),P2 leaves had significantly lower chlorophyll and carotenoid content.LC-MS/MS analysis revealed that P2 had higher quantities of severalmetabolites in the carotenoid biosynthesis pathway.Transcriptome sequencing results showed that genes involved in porphyrin metabolism,carbon fixation,photosynthesis and antenna proteins,terpenoid backbone biosynthesis,and carotenoid biosynthesis were differentially expressed between P1 and P2.Large-scale expression differences were observed in the phytohormone and MAPK signaling pathways,as well as in 15 transcription factor families.We discuss possible mechanisms responsible for the yellowleaf color in P2.These preliminary data are valuable for further exploring the molecular mechanisms of leaf color formation and associated pathways.
基金supported by the Special Fund for Agro-scientific Research in the Public Interest of Fujian Province,China(Grant No.2023R1021006)the National Natural Science Foundation of China(Grant No.32402387)+1 种基金the extended research project of the National Natural Science Foundation of China(Grant No.GJYS202511)the 5511 Collaborative Engineering Project,China(Grant No.XTCXGC2021001).
文摘Magnaporthe oryzae,the causal agent of rice blast,induces significant upregulation of OsPR10b,a pathogenesis-related(PR)pollen allergen(BetV-1)family gene.To investigate its role in immunity,we generated OsPR10b knockout mutants in the Zhonghua 11(ZH11)background.OsPR10b was predominantly expressed in rice calli and strongly induced by M.oryzae infection.Knockout mutants(ospr10b-1 and ospr10b-2)exhibited heightened susceptibility to both M.oryzae and Xanthomonas oryzae pv.oryzae(Xoo),demonstrating that OsPR10b positively regulates resistance to blast and bacterial blight.Our findings elucidate OsPR10b’s role in rice immunity and provide genetic resources for disease-resistant breeding.
基金financially supported by the National Natural Science Foundation of China(Grant Nos.32341026 and 32171998)the Hunan Provincial Science and Technology Innovation Program,China(Grant No.2023NK1010)the Changsha Natural Science Foundation,China(Grant No.20209001).
文摘Leaf color mutants (LCMs) provide crucial insights into the regulatory mechanisms underlying chloroplast development,photo synthesis,and stre ss adaptation.In this study,we identified a temperature-sensitive albino mutant,tsa4,characterized by an albino phenotype at the seedling stage and abnormal chloroplast development at temperatures below 25℃.
基金supported by the Sichuan Science and Technology Program,China(Grant No.2024JDRC0064)the Chongqing Talent Program Foundation,China(Grant No.cstc2024ycjh-bgzxm0063)+1 种基金the National Natural Science Foundation of China(Grant No.32470354)the Sichuan Science and Technology Innovation and Entrepreneurship Seedling Foundation,China(Grant No.2024JDRC0064).
文摘Aerial organs in rice,including leaves,stems,and grains,are crucial for photosynthesis,lodging resistance,and yield.Therefore,an in-depth study on the development of these organs can lay a foundation for achieving high and stable rice yields.In this study,we isolated a novel slender aerial organ mutant sao,which is characterized by a significant reduction in the width of leaves,stems,and grains.Histological analysis revealed that the slender phenotype of aerial organs in sao is caused by impaired cell proliferation and elongation.
基金supported by the National Natural Science Foundation of China(Grant Nos.32372118 and 32188102)the Zhejiang Natural Science Foundation,China(Grant No.LZ25C130010)+1 种基金the Qian Qian Academician Workstation,and the specific research fund of the Innovation Platform for Academicians of Hainan Province,China(Grant No.YSPTZX202303)the Central Public-Interest Scientific Institution Basal Research Fund from Chinese Academy of Agricultural Sciences(Grant No.Y2025YC93)。
文摘Global warming poses a severe threat to rice production and food security.We identified a heat-sensitive mutant hs1 through largescale screening of an established rice mutant library,and subsequently cloned the corresponding gene HS1,which confers thermotolerance in rice.HS1 is localized to the chloroplast and functions by preserving chloroplast integrity under elevated temperatures through stabilizing the photosystem I subunit protein PsaC.Loss of HS1 function in the hs1 mutant leads to severe structural damage to the chloroplast under heat stress,accompanied by intracellular accumulation of reactive oxygen species(ROS),which in turn triggers DNA damage and leaf albinism,ultimately manifesting as a heat-sensitive phenotype.
基金supported by the National Natural Science Foundation of China(Grant No.32372083)the Fundamental Research Funds for Central Public Welfare Research Institutes of Chinese Rice Research Institute(Grant No.CPSIBRF-CNRRI-202401)+1 种基金the Strategic Cooperation Project between Chongqing Municipal People’s Government and Chinese Academy of Agricultural Sciences‘Introduction,Excavation and Innovative Utilization of High-quality Rice Resources’,the China Agriculture Research System(Grant No.CARS-01-14)the Agricultural Science and Technology Innovation Program,China(Grant No.CAAS‐ASTIP‐2013‐CNRRI).
文摘Tiller number is a crucial agronomic trait for achieving high yield in rice.NAC proteins play critical roles in regulating plant growth and development.However,the role of NAC transcription factors in regulating tiller number remains poorly understood.In this study,we isolated a rice NAC gene,OsNAC022,which is conserved in cereal crops and functions as a transcriptional activator.To investigate the role of this gene in rice,we used CRISPR/Cas9 technology to generate a homozygous mutant named CR-osnac022,which exhibited increased tiller number.
基金Funded by Boehringer IngelheimBeamion LUNG-1 ClinicalTrials.gov number,NCT04886804.
文摘Background:Innovative oral targeted therapies are warranted for patients with human epidermal growth factor receptor 2(HER2)-mutant non-small-cell lung cancer(NSCLC).Zongertinib is an oral,irreversible,HER2-selective tyrosine kinase inhibitor that has been shown to have efficacy in persons with advanced or metastatic solid tumors with HER2 alterations in a phase 1 study.
基金supported by the Open Competition Program of Top Ten Critical Priorities of Agricultural Science and Technology Innovation for the 14th Five-Year Plan of Guangdong Province(2022SDZG05)the Guangdong Province Rural Revitalization Strategy Special Fund Seed Industry Revitalization Project(2022-NJS-15-001)the Key-Area Research and Development Program of Guangdong Province(2022B0202060005).
文摘Chloroplasts are essential for normal plant growth and development.In plants,pentatricopeptide repeat(PPR)proteins mediate RNA processing in chloroplasts.Here,we characterized a rice albino leaf 5(al5)mutant which exhibits albinism during early leaf development.The MutMap+analysis and transformation experiments revealed that AL5 encodes a chloroplast-localized P-type PPR protein.The AL5 mutation resulted in the defective splicing of ribosomal protein L2(rpl2)and ribosomal protein S12(rps12),which are involved in the synthesis of chloroplast 50S and 30S ribosomal subunits,respectively.The RNA-electrophoretic mobility shift assay(REMSA)further demonstrated that AL5 directly binds to rpl2 transcripts.Finally,disruption of AL5 led to reduced expression of plastid-encoded polymerase(PEP)-dependent plastid genes and nuclear-encoded photosynthetic genes.Notably,the albino al5 mutant phenotype was regulated by low temperature.These results suggest that AL5 participates in plastid RNA splicing and plays an important role in chloroplast development in rice.
文摘A high yielding rice mutant ( Oryza sativa L. cv. Zhenhui 249) with low chlorophyll b was recently discovered in the field. The mutant was mainly characterized by the decrease of the content of extrinsic antennae complex. This variation was shown in the stage when the leaves were expanding. When the leaves are at the final developmental stage, the content would approach to that of the wild type. It was discovered that only moderate amount of chlorophyll b decreased in this mutant. The photosynthetic apparatus of the mutant was rather stable in the whole life span of the leaf. The extrinsic antennae complex of the mutant might make efficient use of light and meanwhile reduce the production of O -· 2.
