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牙鲆纤维蛋白原相关蛋白(FREP1)基因的克隆和表达分析 被引量:2
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作者 陈文君 鲍宝龙 《上海海洋大学学报》 CAS CSCD 北大核心 2013年第4期488-495,共8页
利用RACE-PCR技术获得了牙鲆FREP1(fibrinogen-relatedprotein)基因1 131 bp cDNA全长序列,其中开放阅读框786 bp,所编码的蛋白C端含有纤维蛋白样结构域标签(WWYSRCGSAGLNG)。RNA整体原位杂交检测发现只在孵化后2 d和5 d(2 dph、5 dph)... 利用RACE-PCR技术获得了牙鲆FREP1(fibrinogen-relatedprotein)基因1 131 bp cDNA全长序列,其中开放阅读框786 bp,所编码的蛋白C端含有纤维蛋白样结构域标签(WWYSRCGSAGLNG)。RNA整体原位杂交检测发现只在孵化后2 d和5 d(2 dph、5 dph)仔鱼的肠道中有FREP1基因表达,而在9 dph和13 dph仔鱼胸鳍、肠道、鳃和皮肤中均有表达。荧光定量PCR检测显示该基因主要在成鱼的肠、鳃、皮肤和鳍条上表达,而脾脏、心脏、肾脏、肝脏和肌肉表达量很低或没有表达。鳍条和皮肤较其他组织均有极显著差异(P<0.01),鳃和肠相比其他组织具有显著差异(P<0.05)。由于该基因主要在鳍条、皮肤、肠和鳃中表达,提示FREP1基因可能和牙鲆先天性免疫相关。 展开更多
关键词 牙鲆 纤维蛋白原相关蛋白基因 RACE-PCR 荧光定量
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Sequence variability of fibrinogen-related proteins(FREPs) in Crassostrea gigas 被引量:1
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作者 ZHANG LinLin LI Li ZHANG GuoFan 《Chinese Science Bulletin》 SCIE CAS 2012年第25期3312-3319,共8页
Fibrinogen-related proteins(FREPs) are lectins with at least a fibrinogen-like domain.They are widespread in Mollusca and play an important role as immune pattern-recognition receptors.These diverse molecules provide ... Fibrinogen-related proteins(FREPs) are lectins with at least a fibrinogen-like domain.They are widespread in Mollusca and play an important role as immune pattern-recognition receptors.These diverse molecules provide interesting models for the study of the evolution of innate immunity.Although oysters are among the most studied mollusks,there have been few investigations of this gene family in oysters.This paper reports the cloning of the first oyster FREP,named CgFREP,from the Pacific oyster Crassostrea gigas.Five types of FREP(CgFREP-1 to CgFREP-5) were obtained based on a single pair of primers,confirming their high diversity.The proteins deduced from these FREPs contained 253-363 amino acids and were divided into three subfamilies based on sequence identities(cutoff point <86%).The topological structure of the phylogenetic tree showed the five CgFREPs clustered together and were completely separated from the subgroup of FREPs obtained from Biomphalaria glabrata(BgFREPs).This implies that FREP diversity evolved before the BgFREPs branched off.An interesting aspect of the CgFREPs was their individual hypermutation.Ninety-three SNPs and five indels were characterized among CgFREPs.Some mutations(e.g.an insertion in CgFREP-5) could cause premature translation termination.Multiple alignments suggest recombination events might have occurred during exchanges between alleles,or by somatic diversification,or both.Individual sequence variability parallels the extraordinary complexity of the innate immune system,suggesting a potential capacity to recognize and eliminate many kinds of pathogens,even in a primitive system.The diversity of immune pattern-recognition receptors may offer an alternative strategy that functions in the absence of highly specific immune globulins,which only emerged in vertebrates. 展开更多
关键词 太平洋牡蛎 纤维蛋白原 序列变异 相关蛋白 单核苷酸多态性 免疫系统 序列同源性 系统进化树
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