Translation is a crucial step in gene expression.Over the past decade,the development and application of ribosome profiling(Ribo-seq)have significantly advanced our understanding of translational regulation in vivo.Ho...Translation is a crucial step in gene expression.Over the past decade,the development and application of ribosome profiling(Ribo-seq)have significantly advanced our understanding of translational regulation in vivo.However,the analysis and visualization of Ribo-seq data remain challenging.Despite the availability of various analytical pipelines,improvements in comprehensiveness,accuracy,and user-friendliness are still necessary.In this study,we develop RiboParser/RiboShiny,a robust framework for analyzing and visualizing Ribo-seq data.Building on published methods,we optimize ribosome structure-based and start/stopbased models to improve the accuracy and stability of P-site detection,even in species with a high proportion of leaderless transcripts.Leveraging these improvements,RiboParser offers comprehensive analyses,including quality control,gene-level analysis,codon-level analysis,and the analysis of Ribo-seq variants.Meanwhile,RiboShiny provides a user-friendly and adaptable platform for data visualization,facilitating deeper insights into the translational landscape.Furthermore,the integration of standardized genome annotation renders our platform universally applicable to various organisms with sequenced genomes.This framework has the potential to significantly improve the precision and efficiency of Ribo-seq data interpretation,thereby deepening our understanding of translational regulation.展开更多
Quantonenpollenites,a pollen taxon which was assumed to be angiosperm,is of great significance in confirming the geological age of its bearing strata.Aims to clarify the taxonomic affiliation of Quantonenpollenites,we...Quantonenpollenites,a pollen taxon which was assumed to be angiosperm,is of great significance in confirming the geological age of its bearing strata.Aims to clarify the taxonomic affiliation of Quantonenpollenites,we investigated the external morphology and internal structure using Light Microscopy(LM),Scanning Electron Microscopy(SEM),and Transmission Electron Microscopy(TEM).According to TEM observations,the exine of Quantonenpollenites pollen is unstratified with the absence of a columellar layer,and the exine is tightly connected with the intine.Based on comprehensive morphological evidence,especially the lack of columellar layer which is typical characteristics existing in almost all angiosperm pollen,the botanical affinity of Quantonenpollenites should be attributed to gymnosperms rather than angiosperms as previously thought.Through comparative analysis,it may have a close affinity with Ephedra,but further analytical data are still needed for verification.As a characteristic palynological type of the Quantou Formation in the Songliao Basin,the occurrence of Quantonenpollenites has indicative significance for determining the age of the hosting strata.By systematically clarifying the phylogenetic affiliation of Quantonenpollenites,together with the other associated palynomorphs,this study provides crucial reference materials for defining the stratigraphic age range of the Quantou Formation(Cenomanian to early Turonian),improves the resolution of stratigraphic age calibration of the Quantou Formation,and provides key paleontological evidence for the refined division of the terrestrial Cretaceous chronostratigraphic framework in the Songliao Basin.展开更多
Due to the unique microstructure and diverse opsin genes of the trinocular compound eye,stomatopoda possess an extraordinary ability to perceive multiple properties of light.They not only can detect natural light(NL)a...Due to the unique microstructure and diverse opsin genes of the trinocular compound eye,stomatopoda possess an extraordinary ability to perceive multiple properties of light.They not only can detect natural light(NL)and linearly polarized light(LPL),but also are the only animals capable of recognizing circularly polarized light(CPL).Here,we integrated single-cell RNA sequencing,previously published Illumina data,and in-situ hybridization(ISH)to quantify and localize functional opsin genes in Oratosquilla oratoria,a common stomatopoda species in the China Sea.A total of high-quality 31777 cells were captured for the first time in the O.oratoria compound eye,which were classified into 25 cell subpopulations,and hypothesized that cluster 22 is a critical cell subpopulation responsible for light(whether NL,LPL,or CPL)response in O.oratoria.Furthermore,we propose that the long-wavelengthsensitive opsin gene(lws)gene family,retinol dehydrogenase(rdh),voltage-gated ion channel(vgic),arrestin(arr),and myosin(myo)collectively mediate the light response in O.oratoria.Considering that very few vision-related opsin genes show differential expression in right-handed CPL(RCPL)-vs.-dark(DL),which provides additional evidence that stomatopoda cannot recognize RCPL.Meanwhile,we believe that UV-stimulated scaffold protein A(uvssa)and red pigment concentrating hormone(rpch)play special contributions in the left-handed CPL(LCPL)environment response.ISH revealing that 16 lws,6 middle-wavelength-sensitive(mws),and 2 ultraviolet(uv)opsin genes were expressed in the photoreceptors of the O.oratoria compound eye.Although the inability to determine the functional types of cell subpopulations limits the resolution of opsin genes,these findings systematically elucidate the specific expression patterns of opsin genes in O.oratoria and represent a significant step toward refining the visual ecological theory of O.oratoria and other stomatopod species.展开更多
UBE2O is a distinctive ubiquitin-conjugating enzyme characterized by its large size(1292 residues)and dual E2/E3 enzymatic activities,enabling diverse ubiquitylation types.Unlike typical E2 enzymes(150~200 residues),U...UBE2O is a distinctive ubiquitin-conjugating enzyme characterized by its large size(1292 residues)and dual E2/E3 enzymatic activities,enabling diverse ubiquitylation types.Unlike typical E2 enzymes(150~200 residues),UBE2O’s multifunctionality allows it to regulate substrate degradation,subcellular localization,and functional modulation.Emerging studies highlight its critical roles in protein quality control,erythroid differentiation,metabolic regulation,and maintenance of circadian rhythm.Dysregulation of UBE2O is implicated in various diseases,including cancers,neurodegenerative disorders,and metabolic diseases.This review extensively discusses the unique structural features,diverse biological functions,and pathological roles of UBE2O,as well as its therapeutic potential for associated diseases.展开更多
Elk are seen at the Tian’ezhou National Nature Reserve for Elk in Shishou,Hubei Province,on 27 November 2025.The reserve’s elk population has risen from just 64 in the 1990s to more than 4,500 today.
Elucidating the origins and mechanisms of polyploidization requires tracing the evolutionary history of polyploid species,particularly those with complex origins.Agropyron cristatum,traditionally regarded as an autopo...Elucidating the origins and mechanisms of polyploidization requires tracing the evolutionary history of polyploid species,particularly those with complex origins.Agropyron cristatum,traditionally regarded as an autopolyploid,exhibits characteristics indicative of a segmental allopolyploid.Here,we used phylogenetic analysis based on a low-copy nuclear gene(i.e.,Pgk1),SLAF-seq,and plastome data from 20 diploid and 120 tetraploid Agropyron individuals to determine whether tetraploid A.cristatum arose from an allopolyploid or autopolyploid event.Phylogenetic analyses based on Pgk1 and SLAF-seq data identified two distinct A.cristatum lineages that corresponded to the two main Agropyron habitats in Central Asia–Europe and East Asia–Qinghai-Tibet Plateau.These findings,taken together with molecular dating and gene flow analyses,suggest that the East Asian tetraploid A.cristatum originated via both autopolyploidy from A.cristatum and hybridization between diploid A.cristatum and A.mongolicum,with each diploid cytotype acting as a maternal donor.Furthermore,the Central Asia–Europe tetraploid A.cristatum originated solely via autopolyploidy of diploid A.cristatum.Our findings also indicate that rapid diversification of Agropyron was likely driven by climate oscillations,geographic isolation,introgressive hybridization,and chloroplast capture.These findings challenge simplistic views of autopolyploids and underscore substantial potential for achieving high levels of genetic and adaptive diversity through recurrent hybridization and reticulate evolution.展开更多
The temporal pole(TP),one of the most expanded cortical regions in humans relative to other primates,plays a crucial role in human language processing.It is also one of the most structurally and functionally asymmetri...The temporal pole(TP),one of the most expanded cortical regions in humans relative to other primates,plays a crucial role in human language processing.It is also one of the most structurally and functionally asymmetric regions.However,whether the functional architecture of the TP is shared by humans and macaques is an open question.We used spectral clustering algorithms to define a cross-species fine-grained TP atlas with different anatomical connectivity patterns.We identified three similar subregions,two ventral and one dorsal,within the TP in both humans and macaques.The parcellation scheme for the TP was validated using functional gradient mapping,anatomical connectivity and resting-state functional connectivity pattern analysis,and functional characterization.Furthermore,in conjunction with the Allen Human Brain Atlas,we revealed the molecular basis for the functional connectivity patterns of each human TP subregion.In addition,we compared the hemispheric asymmetry in mean gray matter volume,anatomical connectivity fingerprints,and whole brain functional connectivity patterns to reveal the evolutionary differences in the TP and found different asymmetric patterns between humans and macaques.In conclusion,our findings reveal that the asymmetry in structure and connectivity may underpin the hemispheric functional specialization of the brain and provide a novel insight into understanding the evolutionary origin of the TP.展开更多
Natural hybridization is known to play a vital role in speciation;however,the mechanisms underlying the early stages of natural hybridization remain unclear.Where two plant species come into contact,two driving forces...Natural hybridization is known to play a vital role in speciation;however,the mechanisms underlying the early stages of natural hybridization remain unclear.Where two plant species come into contact,two driving forces may balance the dynamic consequences of hybridization:fusion by hybridization-mediated gene flow,and separation by reproductive isolation(RI)(Ma et al.,2010a,b;Chang et al.,2022).展开更多
Understanding the dynamics of vegetation carbon sequestration(VCS)is essential for regional carbon neutrality strategies.This study revealed the spatiotemporal patterns of VCS and its relationship with anthropogenic c...Understanding the dynamics of vegetation carbon sequestration(VCS)is essential for regional carbon neutrality strategies.This study revealed the spatiotemporal patterns of VCS and its relationship with anthropogenic carbon emissions(ACEs)in Shandong Province,China during 2000-2020,and identified the sensitivity factors affecting VCS.The results show that:1)VCS increased consistently from 193.45 million t to 256.41 million t,with high values areas concentrated in the central,northeastern,and southeastern mountainous and hilly regions,while low values were found in water bodies and urban built-up areas.At the city level,Linyi,Yantai,Binzhou,and Jinan experienced the most significant rises-reaching up to 243000 t/yr.At the county level,Pingdu,Qixia,and Yiyuan also showed substantial growth,each exceeding 30400 t/yr.2)Digital Elevation Molde(DEM)was identified as the dominant natural factor influencing VCS distribution,while land use optimization measures,especially afforestation and farmland conversion in sloped terrain,were the primary human drivers of VCS increase.3)Urbanization and carbon neutrality were not mutually exclusive.While urban expansion locally reduced VCS,rural emigration enhanced carbon sinks in surrounding areas,partially offsetting urban losses.This compensatory mechanism supported VCS increases in nearly all cities and 90% of counties.Nevertheless,with ACEs continuing to rise and the offset ratio by VCS declining,achieving carbon neutrality requires regional strategies that integrate with accelerated energy conservation,emission reduction technologies,and energy transition.These findings provide a scientific basis for decomposing carbon neutrality targets across cities and counties in Shandong and a reference for developing localized land use policies in similar regions.展开更多
Based on multi-source time-series data from 2017 to 2024,this study comprehensively employed Theil-Sen trend analysis,Mann-Kendall test,random forest regression model,and spatial and temporal lag correlation analysis ...Based on multi-source time-series data from 2017 to 2024,this study comprehensively employed Theil-Sen trend analysis,Mann-Kendall test,random forest regression model,and spatial and temporal lag correlation analysis to systematically investigate the variation characteristics of NDVI and their associated mechanisms with land use changes and groundwater depth in the study area.The results indicate that vegetation activity showed overall significant improvement during the study period,with 60.93%of the area exhibiting significant greening trends and only 6.55%showing degradation.The trajectory characteristics of land use changes could explain approximately 79.64%of the variation in NDVI trends,but their driving effects demonstrated significant spatial heterogeneity,with core driving zones accounting for 79.22%of the area.Groundwater depth showed an overall weak negative correlation with NDVI(r=-0.0464),but exhibited significant lag effects,and the correlation coefficient increased to-0.1763 when there was a lag of 3 months.The study concludes that regional vegetation changes were primarily driven by land use activities,while the influences of groundwater showed spatial and temporal lag characteristics.Ecological restoration policies should integrate land use optimization with water resource management,and fully consider the spatial heterogeneity and temporal lag effects of driving mechanisms.展开更多
Understanding how diet and host phylogeny shape gut microbiota is fundamental to elucidating host-microbe interactions in extreme environments.The Qinghai-Tibet Plateau(QTP),characterized by harsh conditions,provides ...Understanding how diet and host phylogeny shape gut microbiota is fundamental to elucidating host-microbe interactions in extreme environments.The Qinghai-Tibet Plateau(QTP),characterized by harsh conditions,provides a natural laboratory for examining these relationships among sympatric species.Here,we investigated the dietary composition and gut microbiota of six passerine species inhabiting the QTP,comprising two endemic residents(White-rumped Snowfinch Onychostruthus taczanowskii and Ground Tit Pseudopodoces humilis),two nonendemic residents(Rock Sparrow Petronia petronia and Eurasian Tree Sparrow Passer montanus),and two nonendemic migratory species(Twite Linaria flavirostris and Black Redstart Phoenicurus ochruros),using highthroughput 18S and 16S rRNA sequencing.Our results revealed that dietary composition—dominated by Archaeplastida,Metazoa,Fungi,and the SAR supergroup—exhibited no significant interspecific variation,reflecting a high degree of trophic niche overlap.Although the overall diet was similar across species,the relative abundances of certain dietary components independently influenced specific microbial taxa.In particular,dietary Archaeplastida and Fungi showed phylogeny-independent positive correlations with 16 and 3 microbial genera,respectively,revealing fine-scale diet-microbiota associations.Evidence of phylosymbiosis was detected,as closely related species harbored more similar microbial communities driven by species-specific microbial biomarkers.Notably,our results suggested deterministic processes played a stronger role in endemic species,whereas stochastic community assembly dominated in non-endemic species,indicating distinct assembly mechanisms shaped by biogeographic history.Overall,this study reveals that while dietary similarity promotes convergent trophic niches among sympatric passerines,host phylogeny exerts a stronger influence on gut microbiota composition and assembly.These findings underline the synergistic roles of diet-microbiota interactions and phylosymbiosis dynamics as key adaptive strategies that enable birds to cope with the extreme environments of the QTP.展开更多
Coral reefs worldwide are losing their species diversity and ecosystem function under threats from global warming and anthropogenic activities.In this study,we investigated the diversity and current state of scleracti...Coral reefs worldwide are losing their species diversity and ecosystem function under threats from global warming and anthropogenic activities.In this study,we investigated the diversity and current state of scleractinian corals surrounding the Qizhou Archipelago.A total of 87 species of scleractinian corals,belonging to 29 genera and 12 families,were found across ten survey sites.The family Merulinidae exhibited the highest species richness(39 species and 12 genera),followed by Acroporidae(15 species and 3genera).The living coral coverage was 16.9%±10.3%(mean±SD)and ranged from 4.6%to 35.1%,which varied significantly.Massive corals such as Porites lutea,Porites lobata,Montipora nodosa,and Favites abdita were dominant species.The recruitment rate of coral larvae was(1.20±0.97)ind/m^(2)(mean±SD).In addition,we constructed an ecological vulnerability assessment system and evaluated the ecological vulnerability of scleractinian corals surrounding the Qizhou Archipelago.The results showed that scleractinian corals at Gouluanpaoshi(GLPS)and Duifan(DF)were highly vulnerable,whereas those on other islands had low to medium vulnerability.In general,the scleractinian corals surrounding the Qizhou Archipelago show low to medium levels of ecological vulnerability.Identifying severely afflicted areas and developing effective methods to manage coral reefs in these regions are crucial.展开更多
基金supported by the National Key Research and Development Program of China(2022YFA0912100)the National Natural Science Foundation of China(32270098 and 32470073)+1 种基金the Fundamental Research Funds for the Central Universities(2662024JC015)the National Key Laboratory of Agricultural Microbiology(AML2024D02)to Z.Z.
文摘Translation is a crucial step in gene expression.Over the past decade,the development and application of ribosome profiling(Ribo-seq)have significantly advanced our understanding of translational regulation in vivo.However,the analysis and visualization of Ribo-seq data remain challenging.Despite the availability of various analytical pipelines,improvements in comprehensiveness,accuracy,and user-friendliness are still necessary.In this study,we develop RiboParser/RiboShiny,a robust framework for analyzing and visualizing Ribo-seq data.Building on published methods,we optimize ribosome structure-based and start/stopbased models to improve the accuracy and stability of P-site detection,even in species with a high proportion of leaderless transcripts.Leveraging these improvements,RiboParser offers comprehensive analyses,including quality control,gene-level analysis,codon-level analysis,and the analysis of Ribo-seq variants.Meanwhile,RiboShiny provides a user-friendly and adaptable platform for data visualization,facilitating deeper insights into the translational landscape.Furthermore,the integration of standardized genome annotation renders our platform universally applicable to various organisms with sequenced genomes.This framework has the potential to significantly improve the precision and efficiency of Ribo-seq data interpretation,thereby deepening our understanding of translational regulation.
基金supported by the National Key Research and Development Program of China (2023YFC2906701)National Natural Science Foundation of China (42372041, 42072027)China Geological Survey (DD20221646)
文摘Quantonenpollenites,a pollen taxon which was assumed to be angiosperm,is of great significance in confirming the geological age of its bearing strata.Aims to clarify the taxonomic affiliation of Quantonenpollenites,we investigated the external morphology and internal structure using Light Microscopy(LM),Scanning Electron Microscopy(SEM),and Transmission Electron Microscopy(TEM).According to TEM observations,the exine of Quantonenpollenites pollen is unstratified with the absence of a columellar layer,and the exine is tightly connected with the intine.Based on comprehensive morphological evidence,especially the lack of columellar layer which is typical characteristics existing in almost all angiosperm pollen,the botanical affinity of Quantonenpollenites should be attributed to gymnosperms rather than angiosperms as previously thought.Through comparative analysis,it may have a close affinity with Ephedra,but further analytical data are still needed for verification.As a characteristic palynological type of the Quantou Formation in the Songliao Basin,the occurrence of Quantonenpollenites has indicative significance for determining the age of the hosting strata.By systematically clarifying the phylogenetic affiliation of Quantonenpollenites,together with the other associated palynomorphs,this study provides crucial reference materials for defining the stratigraphic age range of the Quantou Formation(Cenomanian to early Turonian),improves the resolution of stratigraphic age calibration of the Quantou Formation,and provides key paleontological evidence for the refined division of the terrestrial Cretaceous chronostratigraphic framework in the Songliao Basin.
基金Supported by the Natural Science Foundation of Shandong Province(No.ZR2021QD110)the National Natural Science Foundation of China(No.42106128)。
文摘Due to the unique microstructure and diverse opsin genes of the trinocular compound eye,stomatopoda possess an extraordinary ability to perceive multiple properties of light.They not only can detect natural light(NL)and linearly polarized light(LPL),but also are the only animals capable of recognizing circularly polarized light(CPL).Here,we integrated single-cell RNA sequencing,previously published Illumina data,and in-situ hybridization(ISH)to quantify and localize functional opsin genes in Oratosquilla oratoria,a common stomatopoda species in the China Sea.A total of high-quality 31777 cells were captured for the first time in the O.oratoria compound eye,which were classified into 25 cell subpopulations,and hypothesized that cluster 22 is a critical cell subpopulation responsible for light(whether NL,LPL,or CPL)response in O.oratoria.Furthermore,we propose that the long-wavelengthsensitive opsin gene(lws)gene family,retinol dehydrogenase(rdh),voltage-gated ion channel(vgic),arrestin(arr),and myosin(myo)collectively mediate the light response in O.oratoria.Considering that very few vision-related opsin genes show differential expression in right-handed CPL(RCPL)-vs.-dark(DL),which provides additional evidence that stomatopoda cannot recognize RCPL.Meanwhile,we believe that UV-stimulated scaffold protein A(uvssa)and red pigment concentrating hormone(rpch)play special contributions in the left-handed CPL(LCPL)environment response.ISH revealing that 16 lws,6 middle-wavelength-sensitive(mws),and 2 ultraviolet(uv)opsin genes were expressed in the photoreceptors of the O.oratoria compound eye.Although the inability to determine the functional types of cell subpopulations limits the resolution of opsin genes,these findings systematically elucidate the specific expression patterns of opsin genes in O.oratoria and represent a significant step toward refining the visual ecological theory of O.oratoria and other stomatopod species.
基金Supported by Special Projects in Key Areas for Guangdong Provincial Colleges and Universities (No.2021ZDZX2009)Guangzhou Medical University Discipline Construction Funds (Basic Medicine)(No.JCXKJS2022A05)。
文摘UBE2O is a distinctive ubiquitin-conjugating enzyme characterized by its large size(1292 residues)and dual E2/E3 enzymatic activities,enabling diverse ubiquitylation types.Unlike typical E2 enzymes(150~200 residues),UBE2O’s multifunctionality allows it to regulate substrate degradation,subcellular localization,and functional modulation.Emerging studies highlight its critical roles in protein quality control,erythroid differentiation,metabolic regulation,and maintenance of circadian rhythm.Dysregulation of UBE2O is implicated in various diseases,including cancers,neurodegenerative disorders,and metabolic diseases.This review extensively discusses the unique structural features,diverse biological functions,and pathological roles of UBE2O,as well as its therapeutic potential for associated diseases.
文摘Elk are seen at the Tian’ezhou National Nature Reserve for Elk in Shishou,Hubei Province,on 27 November 2025.The reserve’s elk population has risen from just 64 in the 1990s to more than 4,500 today.
基金funded by the following projects:the National Natural Science Foundation of China(Nos.31870360 and 32171603)Xining Science and Technology Major Project(2023-Z-13)+2 种基金Qinghai Provincial Science and Technology Major Project(2023-SF-A5)Youth Innovation Promotion Association(Chinese Academy of Sciences,Grant/Award Number:Y2023116)the Qinghai Provincial central guide local science and technology development funds project(2025ZY002).
文摘Elucidating the origins and mechanisms of polyploidization requires tracing the evolutionary history of polyploid species,particularly those with complex origins.Agropyron cristatum,traditionally regarded as an autopolyploid,exhibits characteristics indicative of a segmental allopolyploid.Here,we used phylogenetic analysis based on a low-copy nuclear gene(i.e.,Pgk1),SLAF-seq,and plastome data from 20 diploid and 120 tetraploid Agropyron individuals to determine whether tetraploid A.cristatum arose from an allopolyploid or autopolyploid event.Phylogenetic analyses based on Pgk1 and SLAF-seq data identified two distinct A.cristatum lineages that corresponded to the two main Agropyron habitats in Central Asia–Europe and East Asia–Qinghai-Tibet Plateau.These findings,taken together with molecular dating and gene flow analyses,suggest that the East Asian tetraploid A.cristatum originated via both autopolyploidy from A.cristatum and hybridization between diploid A.cristatum and A.mongolicum,with each diploid cytotype acting as a maternal donor.Furthermore,the Central Asia–Europe tetraploid A.cristatum originated solely via autopolyploidy of diploid A.cristatum.Our findings also indicate that rapid diversification of Agropyron was likely driven by climate oscillations,geographic isolation,introgressive hybridization,and chloroplast capture.These findings challenge simplistic views of autopolyploids and underscore substantial potential for achieving high levels of genetic and adaptive diversity through recurrent hybridization and reticulate evolution.
基金supported by the Yunnan Fundamental Research Projects(202501AV070005 and 202201BE070001-004).
文摘The temporal pole(TP),one of the most expanded cortical regions in humans relative to other primates,plays a crucial role in human language processing.It is also one of the most structurally and functionally asymmetric regions.However,whether the functional architecture of the TP is shared by humans and macaques is an open question.We used spectral clustering algorithms to define a cross-species fine-grained TP atlas with different anatomical connectivity patterns.We identified three similar subregions,two ventral and one dorsal,within the TP in both humans and macaques.The parcellation scheme for the TP was validated using functional gradient mapping,anatomical connectivity and resting-state functional connectivity pattern analysis,and functional characterization.Furthermore,in conjunction with the Allen Human Brain Atlas,we revealed the molecular basis for the functional connectivity patterns of each human TP subregion.In addition,we compared the hemispheric asymmetry in mean gray matter volume,anatomical connectivity fingerprints,and whole brain functional connectivity patterns to reveal the evolutionary differences in the TP and found different asymmetric patterns between humans and macaques.In conclusion,our findings reveal that the asymmetry in structure and connectivity may underpin the hemispheric functional specialization of the brain and provide a novel insight into understanding the evolutionary origin of the TP.
基金supported by the National Natural Science Foundation of China(U23A20160,32360336)Guizhou Provincial Key Technology R&D Program(Qian KeHe ZhiCheng[2023]YiBan035).
文摘Natural hybridization is known to play a vital role in speciation;however,the mechanisms underlying the early stages of natural hybridization remain unclear.Where two plant species come into contact,two driving forces may balance the dynamic consequences of hybridization:fusion by hybridization-mediated gene flow,and separation by reproductive isolation(RI)(Ma et al.,2010a,b;Chang et al.,2022).
基金Under the auspices of the National Natural Science Foundation of China(No.42476247,42461015)the Open Research Fund of Key Laboratory of Coastal Science and Integrated Management,Ministry of Natural Resources(No.2024COSIM01)Guangxi Science and Technology Base and Talent Special Project(No.GuikeAD23026194)。
文摘Understanding the dynamics of vegetation carbon sequestration(VCS)is essential for regional carbon neutrality strategies.This study revealed the spatiotemporal patterns of VCS and its relationship with anthropogenic carbon emissions(ACEs)in Shandong Province,China during 2000-2020,and identified the sensitivity factors affecting VCS.The results show that:1)VCS increased consistently from 193.45 million t to 256.41 million t,with high values areas concentrated in the central,northeastern,and southeastern mountainous and hilly regions,while low values were found in water bodies and urban built-up areas.At the city level,Linyi,Yantai,Binzhou,and Jinan experienced the most significant rises-reaching up to 243000 t/yr.At the county level,Pingdu,Qixia,and Yiyuan also showed substantial growth,each exceeding 30400 t/yr.2)Digital Elevation Molde(DEM)was identified as the dominant natural factor influencing VCS distribution,while land use optimization measures,especially afforestation and farmland conversion in sloped terrain,were the primary human drivers of VCS increase.3)Urbanization and carbon neutrality were not mutually exclusive.While urban expansion locally reduced VCS,rural emigration enhanced carbon sinks in surrounding areas,partially offsetting urban losses.This compensatory mechanism supported VCS increases in nearly all cities and 90% of counties.Nevertheless,with ACEs continuing to rise and the offset ratio by VCS declining,achieving carbon neutrality requires regional strategies that integrate with accelerated energy conservation,emission reduction technologies,and energy transition.These findings provide a scientific basis for decomposing carbon neutrality targets across cities and counties in Shandong and a reference for developing localized land use policies in similar regions.
基金Supported by the Key Special Project for Water Conservancy Science and Technology of Ordos City(ESKJ2023-001).
文摘Based on multi-source time-series data from 2017 to 2024,this study comprehensively employed Theil-Sen trend analysis,Mann-Kendall test,random forest regression model,and spatial and temporal lag correlation analysis to systematically investigate the variation characteristics of NDVI and their associated mechanisms with land use changes and groundwater depth in the study area.The results indicate that vegetation activity showed overall significant improvement during the study period,with 60.93%of the area exhibiting significant greening trends and only 6.55%showing degradation.The trajectory characteristics of land use changes could explain approximately 79.64%of the variation in NDVI trends,but their driving effects demonstrated significant spatial heterogeneity,with core driving zones accounting for 79.22%of the area.Groundwater depth showed an overall weak negative correlation with NDVI(r=-0.0464),but exhibited significant lag effects,and the correlation coefficient increased to-0.1763 when there was a lag of 3 months.The study concludes that regional vegetation changes were primarily driven by land use activities,while the influences of groundwater showed spatial and temporal lag characteristics.Ecological restoration policies should integrate land use optimization with water resource management,and fully consider the spatial heterogeneity and temporal lag effects of driving mechanisms.
基金supported by the National Key Research and Development Program of China(2024YFC2310303)the National Natural Science Foundation of China(NSFC,No.32471572)awarded to D.L.+1 种基金NSFC(No.32171490)awarded to Y.W.Hebei Natural Science Foundation(HNSF,C2021204059)awarded to Y.S。
文摘Understanding how diet and host phylogeny shape gut microbiota is fundamental to elucidating host-microbe interactions in extreme environments.The Qinghai-Tibet Plateau(QTP),characterized by harsh conditions,provides a natural laboratory for examining these relationships among sympatric species.Here,we investigated the dietary composition and gut microbiota of six passerine species inhabiting the QTP,comprising two endemic residents(White-rumped Snowfinch Onychostruthus taczanowskii and Ground Tit Pseudopodoces humilis),two nonendemic residents(Rock Sparrow Petronia petronia and Eurasian Tree Sparrow Passer montanus),and two nonendemic migratory species(Twite Linaria flavirostris and Black Redstart Phoenicurus ochruros),using highthroughput 18S and 16S rRNA sequencing.Our results revealed that dietary composition—dominated by Archaeplastida,Metazoa,Fungi,and the SAR supergroup—exhibited no significant interspecific variation,reflecting a high degree of trophic niche overlap.Although the overall diet was similar across species,the relative abundances of certain dietary components independently influenced specific microbial taxa.In particular,dietary Archaeplastida and Fungi showed phylogeny-independent positive correlations with 16 and 3 microbial genera,respectively,revealing fine-scale diet-microbiota associations.Evidence of phylosymbiosis was detected,as closely related species harbored more similar microbial communities driven by species-specific microbial biomarkers.Notably,our results suggested deterministic processes played a stronger role in endemic species,whereas stochastic community assembly dominated in non-endemic species,indicating distinct assembly mechanisms shaped by biogeographic history.Overall,this study reveals that while dietary similarity promotes convergent trophic niches among sympatric passerines,host phylogeny exerts a stronger influence on gut microbiota composition and assembly.These findings underline the synergistic roles of diet-microbiota interactions and phylosymbiosis dynamics as key adaptive strategies that enable birds to cope with the extreme environments of the QTP.
基金funded by the Scientific Research Foundation of Third Institute of Oceanography,Ministry of Natural Resources(Nos.2022024 and 2020006)the National Natural Science Foundation of China(No.42106143)。
文摘Coral reefs worldwide are losing their species diversity and ecosystem function under threats from global warming and anthropogenic activities.In this study,we investigated the diversity and current state of scleractinian corals surrounding the Qizhou Archipelago.A total of 87 species of scleractinian corals,belonging to 29 genera and 12 families,were found across ten survey sites.The family Merulinidae exhibited the highest species richness(39 species and 12 genera),followed by Acroporidae(15 species and 3genera).The living coral coverage was 16.9%±10.3%(mean±SD)and ranged from 4.6%to 35.1%,which varied significantly.Massive corals such as Porites lutea,Porites lobata,Montipora nodosa,and Favites abdita were dominant species.The recruitment rate of coral larvae was(1.20±0.97)ind/m^(2)(mean±SD).In addition,we constructed an ecological vulnerability assessment system and evaluated the ecological vulnerability of scleractinian corals surrounding the Qizhou Archipelago.The results showed that scleractinian corals at Gouluanpaoshi(GLPS)and Duifan(DF)were highly vulnerable,whereas those on other islands had low to medium vulnerability.In general,the scleractinian corals surrounding the Qizhou Archipelago show low to medium levels of ecological vulnerability.Identifying severely afflicted areas and developing effective methods to manage coral reefs in these regions are crucial.
