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A gap-free and haplotype-resolved genome of an early-season indica variety provides insights into rice thermotolerance and grain quality
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作者 Wenjing Tao Leilei Qiu +16 位作者 Jingsheng Zheng Liangrong Jiang Qiwen Xu Shaowei Xu Shiting Song Zhibiao Fan Qixin Zheng Qinqin Wu Jiupan Han Rui Li Jingxian Wang yuchao cui Xi Huang Changlin Zheng Hai Zhang Rongyu Huang Xinhao Ouyang 《Journal of Genetics and Genomics》 2025年第11期1417-1420,共4页
Rice(Oryza sativa L.)is essential for global food security,but faces increasing threats from extreme weather.High temperatures during the grain-filling stage lower rice yields and quality(Wada et al.,2019).Studies hav... Rice(Oryza sativa L.)is essential for global food security,but faces increasing threats from extreme weather.High temperatures during the grain-filling stage lower rice yields and quality(Wada et al.,2019).Studies have revealed the mechanisms by which heat stress impairs rice quality during the grain-filling stage,including the involvement of factors such as DG1(Qin et al.,2021b),Oscp Hsp70-2(Tabassum et al.,2020),and Osb ZIP58Β(Xu et al.,2020). 展开更多
关键词 heat stress RICE THERMOTOLERANCE genome osb zip xu grain quality indica variety extreme weather
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Identification of natural allelic variation in TTL1 controlling thermotolerance and grain size by a rice super pan-genome∞ 被引量:4
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作者 Yarong Lin Yiwang Zhu +17 位作者 yuchao cui Hongge Qian Qiaoling Yuan Rui Chen Yan Lin Jianmin Chen Xishi Zhou Chuanlin Shi Huiying He Taijiao Hu Chenbo Gu Xiaoman Yu Xiying Zhu Yuexing Wang Qian Qian cuijun Zhang Feng Wang Lianguang Shang 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2023年第12期2541-2551,共11页
Continuously increasing global temperatures present great challenges to food security.Grain size,one of the critical components determining grain yield in rice(Oryza sativa L.),is a prime target for genetic breeding.T... Continuously increasing global temperatures present great challenges to food security.Grain size,one of the critical components determining grain yield in rice(Oryza sativa L.),is a prime target for genetic breeding.Thus,there is an immediate need for genetic improvement in rice to maintain grain yield under heat stress.However,quantitative trait loci(QTLs)endowing heat stress tolerance and grain size in rice are extremely rare.Here,we identified a novel negative regulator with pleiotropic effects,Thermo‐Tolerance and grain Length 1(TTL1),from the super pan‐genomic and transcriptomic data.Loss‐of‐function mutations in TTL1 enhanced heat tolerance,and caused an increase in grain size by coordinating cell expansion and proliferation.TTL1 was shown to function as a transcriptional regulator and localized to the nucleus and cell membrane.Furthermore,haplotype analysis showed that hapL and hapS of TTL1 were obviously correlated with variations of thermotolerance and grain size in a core collection of cultivars.Genome evolution analysis of available rice germplasms suggested that TTL1 was selected during domestication of the indica and japonica rice subspecies,but still had much breeding potential for increasing grain length and thermotolerance.These findings provide insights into TTL1 as a novel potential target for the development of high‐yield and thermotolerant rice varieties. 展开更多
关键词 DOMESTICATION grain size heat tolerance pan‐genome natural variation
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