Oceanic dissolved oxygen(DO)concentration is crucial for assessing the status of marine ecosystems.Against the backdrop of global warming,DO shows a general decrease,posing a threat to the health of marine ecosystems....Oceanic dissolved oxygen(DO)concentration is crucial for assessing the status of marine ecosystems.Against the backdrop of global warming,DO shows a general decrease,posing a threat to the health of marine ecosystems.Therefore,there is an urgent need to develop advanced tools to characterize the spatio-temporal variations of three-dimensional(3D)DO.To address this challenge,this study introduces the Light Gradient Boosting Machine(Light-GBM),combining satellite remote sensing and reanalysis data with Biogeochemical Argo data to accurately reconstruct the 3D DO structure in the Mediterranean Sea from 2010 to 2022.Various environmental parameters are incorporated as inputs,including spatiotemporal features,meteorological characteristics,and ocean color properties.The LightGBM model demonstrates excellent performance on the testing dataset with R^(2) of 0.958.The modeled DO agrees better with in-situ measurements than products from numerical models.Using the Shapley Additive exPlanations method,the contributions of input features are assessed.Sea surface temperatures provide a correlation with DO at the sea surface,while spatial coordinates supplement the view of the ocean interior.Based on the reconstructed 3D DO structure,we identify an oxygen minimum zone in the western Mediterranean that expands continuously,reaching depths of approximately 300–800 m.The western Mediterranean exhibits a significant declining trend.This study enhances marine environmental evidence by proposing a precise and cost-effective approach for reconstructing 3D DO,thereby offering insights into the dynamics of DO variations under changing climatic conditions.展开更多
Abscisic acid(ABA)is an important carotenoid-derived phytohormone that plays essential roles in plant response to biotic and abiotic stresses as well as in various physiological and developmental processes.In Arabidop...Abscisic acid(ABA)is an important carotenoid-derived phytohormone that plays essential roles in plant response to biotic and abiotic stresses as well as in various physiological and developmental processes.In Arabidopsis,ABA biosynthesis starts with the epoxidation of zeaxanthin by the ABA DEFICIENT 1(ABA1)enzyme,leading to epoxycarotenoids;e.g.,violaxanthin.The oxidative cleavage of 9-cis-epoxycaro-tenoids,a key regulatory step catalyzed by 9-C/S-EPOXYCAROTENOID DIOXYGENASE,forms xanthoxin,which is converted in further rea.ctions mediated by ABA DEFICIENT 2(ABA2),ABA DEFICIENT 3(ABA3),and ABSCISIC ALDEHYDE OXIDASE 3(AAO3)into ABA.By combining genetic and biochemical approaches,we unravel here an ABA1-independent ABA biosynthetic pathway starting upstream of zeaxanthin.We iden-tified the carotenoid cleavage products(i.e.,apocarotenoids,β-apo-11-carotenal,9-cis-β-apo-11-carotenal,3-OH-β-apo-11-carotenal,and 9-cis-3-OH-β-apo-11-carotenal)as intermediates of this ABA1-independent ABA biosynthetic pathway.Using labeled compounds,we showed thatβ-apo-11-carotenal,9-cis-β-apo-11-carotenal,and 3-OH-β-apo-11-carotenal are successively converted into 9-cis-3-OH-β-apo-11-carotenal,xanthoxin,and finally into ABA in both Arabidopsis and rice.When applied to Arabidopsis,theseβ-apo-11-carotenoids exert ABA biological functions,such as maintaining seed dormancy and inducing the expression of ABA-responsive genes.Moreover,the transcdptomic analysis revealed a high overlap of differentially expressed genes regulated byβ-apo-11-carotenoids and ABA,suggesting thatβ-apo-11-carot-enoids exert ABA-independent regulatory activities.Taken together,our study identifies a biological function for the common plant metabolites,β-apo-11-carotenoids,extends our knowledge about ABA biosynthesis,and provides new insights into plant apocarotenoid metabolic networks.展开更多
基金supported by the Central Guiding Local Science and Technology Development Fund of Shandong-Yellow River Basin(No.YDZX2023019)Shandong Natural Science Foundation of China(Nos.ZR2020QF067 and ZR2023QD073)+6 种基金the Discipline Cluster Research Project of Qingdao University“Deep mining and intelligent prediction of multimodal big data for marine ecological disasters”(No.20240604)sourced from the International Argo Program and the national programs that contribute to it(https://argo.ucsd.edu)the CMEMS(http://marine.copernicus.eu/)the CDS(https://cds.climate.copernicus.eu/)the EMODnet(https://www.emodnet-chemistry.eu/)obtained from the ERA5(https://www.ecmwf.int)derived from the Glob Colour Project(http://globcolour.info).
文摘Oceanic dissolved oxygen(DO)concentration is crucial for assessing the status of marine ecosystems.Against the backdrop of global warming,DO shows a general decrease,posing a threat to the health of marine ecosystems.Therefore,there is an urgent need to develop advanced tools to characterize the spatio-temporal variations of three-dimensional(3D)DO.To address this challenge,this study introduces the Light Gradient Boosting Machine(Light-GBM),combining satellite remote sensing and reanalysis data with Biogeochemical Argo data to accurately reconstruct the 3D DO structure in the Mediterranean Sea from 2010 to 2022.Various environmental parameters are incorporated as inputs,including spatiotemporal features,meteorological characteristics,and ocean color properties.The LightGBM model demonstrates excellent performance on the testing dataset with R^(2) of 0.958.The modeled DO agrees better with in-situ measurements than products from numerical models.Using the Shapley Additive exPlanations method,the contributions of input features are assessed.Sea surface temperatures provide a correlation with DO at the sea surface,while spatial coordinates supplement the view of the ocean interior.Based on the reconstructed 3D DO structure,we identify an oxygen minimum zone in the western Mediterranean that expands continuously,reaching depths of approximately 300–800 m.The western Mediterranean exhibits a significant declining trend.This study enhances marine environmental evidence by proposing a precise and cost-effective approach for reconstructing 3D DO,thereby offering insights into the dynamics of DO variations under changing climatic conditions.
基金This work was supported by baseline funding and the Research Grants Prog ram-Round 4(CRG4)baseline funding from King Abdullah University of Science and Technology to S.A.-B.National Natural Science Foundation of China(funds 31900245 and 32170271)given to K.-P.J.
文摘Abscisic acid(ABA)is an important carotenoid-derived phytohormone that plays essential roles in plant response to biotic and abiotic stresses as well as in various physiological and developmental processes.In Arabidopsis,ABA biosynthesis starts with the epoxidation of zeaxanthin by the ABA DEFICIENT 1(ABA1)enzyme,leading to epoxycarotenoids;e.g.,violaxanthin.The oxidative cleavage of 9-cis-epoxycaro-tenoids,a key regulatory step catalyzed by 9-C/S-EPOXYCAROTENOID DIOXYGENASE,forms xanthoxin,which is converted in further rea.ctions mediated by ABA DEFICIENT 2(ABA2),ABA DEFICIENT 3(ABA3),and ABSCISIC ALDEHYDE OXIDASE 3(AAO3)into ABA.By combining genetic and biochemical approaches,we unravel here an ABA1-independent ABA biosynthetic pathway starting upstream of zeaxanthin.We iden-tified the carotenoid cleavage products(i.e.,apocarotenoids,β-apo-11-carotenal,9-cis-β-apo-11-carotenal,3-OH-β-apo-11-carotenal,and 9-cis-3-OH-β-apo-11-carotenal)as intermediates of this ABA1-independent ABA biosynthetic pathway.Using labeled compounds,we showed thatβ-apo-11-carotenal,9-cis-β-apo-11-carotenal,and 3-OH-β-apo-11-carotenal are successively converted into 9-cis-3-OH-β-apo-11-carotenal,xanthoxin,and finally into ABA in both Arabidopsis and rice.When applied to Arabidopsis,theseβ-apo-11-carotenoids exert ABA biological functions,such as maintaining seed dormancy and inducing the expression of ABA-responsive genes.Moreover,the transcdptomic analysis revealed a high overlap of differentially expressed genes regulated byβ-apo-11-carotenoids and ABA,suggesting thatβ-apo-11-carot-enoids exert ABA-independent regulatory activities.Taken together,our study identifies a biological function for the common plant metabolites,β-apo-11-carotenoids,extends our knowledge about ABA biosynthesis,and provides new insights into plant apocarotenoid metabolic networks.
