This paper represents the fifth One Stop Shop(OSS)series contribution.This series provides background,disease symptoms,pathogen biology and epidemiology(when available)distribution,hosts for the treated genera,and imp...This paper represents the fifth One Stop Shop(OSS)series contribution.This series provides background,disease symptoms,pathogen biology and epidemiology(when available)distribution,hosts for the treated genera,and important gene regions for a better resolution.Species that have pathogenic data are also provided under each genus.This fifth OSS paper treats 25 genera of phytopathogenic fungi:Allophoma,Alternaria,Bipolaris,Boeremia,Calonectria,Calophoma,Campylocarpon,Clonastachys,Corynespora,Cryphonectria,Diaporthe,Diplocarpon,Epicoccum,Eutiarosporella,Ganoderma,Hypomyces,Lasiodiplodia,Monilinia,Neocordana,Phragmidium,Pileolaria,Pseudocercospora,Rhynchosporium,Scytalidium and Sphaeropsis.展开更多
Fungi are an understudied,biotechnologically valuable group of organisms.Due to the immense range of habitats that fungi inhabit,and the consequent need to compete against a diverse array of other fungi,bacteria,and a...Fungi are an understudied,biotechnologically valuable group of organisms.Due to the immense range of habitats that fungi inhabit,and the consequent need to compete against a diverse array of other fungi,bacteria,and animals,fungi have developed numerous survival mechanisms.The unique attributes of fungi thus herald great promise for their application in biotechnology and industry.Moreover,fungi can be grown with relative ease,making production at scale viable.The search for fungal biodiversity,and the construction of a living fungi collection,both have incredible economic potential in locating organisms with novel industrial uses that will lead to novel products.This manuscript reviews fifty ways in which fungi can potentially be utilized as biotechnology.We provide notes and examples for each potential exploitation and give examples from our own work and the work of other notable researchers.We also provide a flow chart that can be used to convince funding bodies of the importance of fungi for biotechnological research and as potential products.Fungi have provided the world with penicillin,lovastatin,and other globally significant medicines,and they remain an untapped resource with enormous industrial potential.展开更多
Sooty moulds are a remarkable,but poorly understood group of fungi.They coat fruits and leaves superficially with black mycelia,which reduces photosynthesis rates of host plants.Few researchers have,however,tried to q...Sooty moulds are a remarkable,but poorly understood group of fungi.They coat fruits and leaves superficially with black mycelia,which reduces photosynthesis rates of host plants.Few researchers have,however,tried to quantify their economic importance.Sooty moulds have been well-studied at the morphological level,but they are poorly represented in a natural classification based on phylogeny.Representatives are presently known in Antennulariellaceae,Capnodiaceae,Chaetothyriaceae,Coccodiniaceae,Euantennariaceae,Metacapnodiaceae and Trichomeriaceae and several miscellaneous genera.However,molecular data is available for only five families.Most sooty mould colonies comprise numerous species and thus it is hard to confirm relationships between genera or sexual and asexual states.Future studies need to obtain single spore isolates of species to test their phylogenetic affinities and linkages between morphs.Next generation sequencing has shown sooty mould colonies to contain many more fungal species than expected,but it is not clear which species are dominant or active in the communities.They are more common in tropical,subtropical and warm temperate regions and thus their prevalence in temperate regions is likely to increase with global warming.Sooty moulds are rarely parasitized by fungicolous taxa and these may have biocontrol potential.They apparently grow in extreme environments and may be xerophilic.This needs testing as xerophilic taxa may be of interest for industrial applications.Sooty moulds grow on sugars and appear to out-compete typical“weed”fungi and bacteria.They may produce antibiotics for this purpose and their biochemical potential for obtaining novel bioactive compounds for medical application is underexplored.展开更多
This article is the ninth in the series of Fungal Diversity Notes,where 107 taxa distributed in three phyla,nine classes,31 orders and 57 families are described and illustrated.Taxa described in the present study incl...This article is the ninth in the series of Fungal Diversity Notes,where 107 taxa distributed in three phyla,nine classes,31 orders and 57 families are described and illustrated.Taxa described in the present study include 12 new genera,74 new species,three new combinations,two reference specimens,a re-circumscription of the epitype,and 15 records of sexualasexual morph connections,new hosts and new geographical distributions.Twelve new genera comprise Brunneofusispora,Brunneomurispora,Liua,Lonicericola,Neoeutypella,Paratrimmatostroma,Parazalerion,Proliferophorum,Pseudoastrosphaeriellopsis,Septomelanconiella,Velebitea and Vicosamyces.Seventy-four new species are Agaricus memnonius,A.langensis,Aleurodiscus patagonicus,Amanita flavoalba,A.subtropicana,Amphisphaeria mangrovei,Baorangia major,Bartalinia kunmingensis,Brunneofusispora sinensis,Brunneomurispora lonicerae,Capronia camelliaeyunnanensis,Clavulina thindii,Coniochaeta simbalensis,Conlarium thailandense,Coprinus trigonosporus,Liua muriformis,Cyphellophora filicis,Cytospora ulmicola,Dacrymyces invisibilis,Dictyocheirospora metroxylonis,Distoseptispora thysanolaenae,Emericellopsis koreana,Galiicola baoshanensis,Hygrocybe lucida,Hypoxylon teeravasati,Hyweljonesia indica,Keissleriella caraganae,Lactarius olivaceopallidus,Lactifluus midnapurensis,Lembosia brigadeirensis,Leptosphaeria urticae,Lonicericola hyaloseptispora,Lophiotrema mucilaginosis,Marasmiellus bicoloripes,Marasmius indojasminodorus,Micropeltis phetchaburiensis,Mucor orantomantidis,Murilentithecium lonicerae,Neobambusicola brunnea,Neoeutypella baoshanensis,Neoroussoella heveae,Neosetophoma lonicerae,Ophiobolus malleolus,Parabambusicola thysanolaenae,Paratrimmatostroma kunmingensis,Parazalerion indica,Penicillium dokdoense,Peroneutypa mangrovei,Phaeosphaeria cycadis,Phanerochaete australosanguinea,Plectosphaerella kunmingensis,Plenodomus artemisiae,P.lijiangensis,Proliferophorum thailandicum,Pseudoastrosphaeriellopsis kaveriana,Pseudohelicomyces menglunicus,Pseudoplagiostoma mangiferae,Robillarda mangiferae,Roussoella elaeicola,Russula choptae,R.uttarakhandia,Septomelanconiella thailandica,Spencermartinsia acericola,Sphaerellopsis isthmospora,Thozetella lithocarpi,Trechispora echinospora,Tremellochaete atlantica,Trichoderma koreanum,T.pinicola,T.rugulosum,Velebitea chrysotexta,Vicosamyces venturisporus,Wojnowiciella kunmingensis and Zopfiella indica.Three new combinations are Baorangia rufomaculata,Lanmaoa pallidorosea and Wojnowiciella rosicola.The reference specimens of Canalisporium kenyense and Tamsiniella labiosa are designated.The epitype of Sarcopeziza sicula is re-circumscribed based on cyto-and histochemical analyses.The sexual-asexual morph connection of Plenodomus sinensis is reported from ferns and Cirsium for the first time.In addition,the new host records and country records are Amanita altipes,A.melleialba,Amarenomyces dactylidis,Chaetosphaeria panamensis,Coniella vitis,Coprinopsis kubickae,Dothiorella sarmentorum,Leptobacillium leptobactrum var.calidus,Muyocopron lithocarpi,Neoroussoella solani,Periconia cortaderiae,Phragmocamarosporium hederae,Sphaerellopsis paraphysata and Sphaeropsis eucalypticola.展开更多
Dothideomycetes comprise a highly diverse range of fungi characterized mainly by asci with two wall layers(bitunicate asci)and often with fissitunicate dehiscence.Many species are saprobes,with many asexual states com...Dothideomycetes comprise a highly diverse range of fungi characterized mainly by asci with two wall layers(bitunicate asci)and often with fissitunicate dehiscence.Many species are saprobes,with many asexual states comprising important plant pathogens.They are also endophytes,epiphytes,fungicolous,lichenized,or lichenicolous fungi.They occur in terrestrial,freshwater and marine habitats in almost every part of the world.We accept 105 families in Dothideomycetes with the new families Anteagloniaceae,Bambusicolaceae,Biatriosporaceae,Lichenoconiaceae,Muyocopronaceae,Paranectriellaceae,Roussoellaceae,Salsugineaceae,Seynesiopeltidaceae and Thyridariaceae introduced in this paper.Each family is provided with a description and notes,including asexual and asexual states,and if more than one genus is included,the type genus is also characterized.Each family is provided with at least one figure-plate,usually illustrating the type genus,a list of accepted genera,including asexual genera,and a key to these genera.A phylogenetic tree based on four gene combined analysis add support for 64 of the families and 22 orders,including the novel orders,Dyfrolomycetales,Lichenoconiales,Lichenotheliales,Monoblastiales,Natipusillales,Phaeotrichales and Strigulales.The paper is expected to provide a working document on Dothideomycetes which can be modified as new data comes to light.It is hoped that by illustrating types we provide stimulation and interest so that more work is carried out in this remarkable group of fungi.展开更多
This article is the tenth series of the Fungal Diversity Notes,where 114 taxa distributed in three phyla,ten classes,30 orders and 53 families are described and illustrated.Taxa described in the present study include ...This article is the tenth series of the Fungal Diversity Notes,where 114 taxa distributed in three phyla,ten classes,30 orders and 53 families are described and illustrated.Taxa described in the present study include one new family(viz.Pseudoberkleasmiaceae in Dothideomycetes),five new genera(Caatingomyces,Cryptoschizotrema,Neoacladium,Paramassaria and Trochilispora)and 71 new species,(viz.Acrogenospora thailandica,Amniculicola aquatica,A.guttulata,Angustimassarina sylvatica,Blackwellomyces lateris,Boubovia gelatinosa,Buellia viridula,Caatingomyces brasiliensis,Calophoma humuli,Camarosporidiella mori,Canalisporium dehongense,Cantharellus brunneopallidus,C.griseotinctus,Castanediella meliponae,Coprinopsis psammophila,Cordyceps succavus,Cortinarius minusculus,C.subscotoides,Diaporthe italiana,D.rumicicola,Diatrypella delonicis,Dictyocheirospora aquadulcis,D.taiwanense,Digitodesmium chiangmaiense,Distoseptispora dehongensis,D.palmarum,Dothiorella styphnolobii,Ellisembia aurea,Falciformispora aquatic,Fomitiporia carpinea,F.lagerstroemiae,Grammothele aurantiaca,G.micropora,Hermatomyces bauhiniae,Jahnula queenslandica,Kamalomyces mangrovei,Lecidella yunnanensis,Micarea squamulosa,Muriphaeosphaeria angustifoliae,Neoacladium indicum,Neodidymelliopsis sambuci,Neosetophoma miscanthi,N.salicis,Nodulosphaeria aquilegiae,N.thalictri,Paramassaria samaneae,Penicillium circulare,P.geumsanense,P.mali-pumilae,P.psychrotrophicum,P.wandoense,Phaeoisaria siamensis,Phaeopoacea asparagicola,Phaeosphaeria penniseti,Plectocarpon galapagoense,Porina sorediata,Pseudoberkleasmium chiangmaiense,Pyrenochaetopsis sinensis,Rhizophydium koreanum,Russula prasina,Sporoschisma chiangraiense,Stigmatomyces chamaemyiae,S.cocksii,S.papei,S.tschirnhausii,S.vikhrevii,Thysanorea uniseptata,Torula breviconidiophora,T.polyseptata,Trochilispora schefflerae and Vaginatispora palmae).Further,twelve new combinations(viz.Cryptoschizotrema cryptotrema,Prolixandromyces australi,P.elongatus,P.falcatus,P.longispinae,P.microveliae,P.neoalardi,P.polhemorum,P.protuberans,P.pseudoveliae,P.tenuistipitis and P.umbonatus),an epitype is chosen for Cantharellus goossensiae,a reference specimen for Acrogenospora sphaerocephala and new synonym Prolixandromyces are designated.Twenty-four new records on new hosts and new geographical distributions are also reported(i.e.Acrostalagmus annulatus,Cantharellus goossensiae,Coprinopsis villosa,Dothiorella plurivora,Dothiorella rhamni,Dothiorella symphoricarposicola,Dictyocheirospora rotunda,Fasciatispora arengae,Grammothele brasiliensis,Lasiodiplodia iraniensis,Lembosia xyliae,Morenoina palmicola,Murispora cicognanii,Neodidymelliopsis farokhinejadii,Neolinocarpon rachidis,Nothophoma quercina,Peroneutypa scoparia,Pestalotiopsis aggestorum,Pilidium concavum,Plagiostoma salicellum,Protofenestella ulmi,Sarocladium kiliense,Tetraploa nagasakiensis and Vaginatispora armatispora).展开更多
The type specimens of Auerswaldia,Auerswaldiella,Barriopsis,Botryosphaeria,Leptoguignardia,Melanops,Neodeightonia,Phaeobotryon,Phaeobotryosphaeria,Phyllachorella,Pyrenostigme,Saccharata,Sivanesania,Spencermartinsia an...The type specimens of Auerswaldia,Auerswaldiella,Barriopsis,Botryosphaeria,Leptoguignardia,Melanops,Neodeightonia,Phaeobotryon,Phaeobotryosphaeria,Phyllachorella,Pyrenostigme,Saccharata,Sivanesania,Spencermartinsia and Vestergrenia were examined and fresh specimens of Botryosphaeriales were collected from Thailand.This material is used to provide a systematic treatment of Botryosphaeriales based on morphology and phylogeny.Two new genera,Botryobambusa and Cophinforma are introduced and comparedwith existing genera.Four species newto science,Auerswaldia dothiorella,A.lignicola,Botryosphaeria fusispora and Phaeobotryosphaeria eucalypti,are also described and justified.We accept 29 genera in Botryosphaeriales,with Macrovalsaria being newly placed.In the phylogenetic tree,the 114 strains of Botyrosphaeriales included in the analysis cluster into two major clades with 80%,96%and 1.00(MP,ML and BY)support,with Clade A containing the family type of Botryosphaeriaceae,and Clade B containing Phyllosticta,Saccharata and Melanops species.This group may represent Phyllostictaceae.In Clade A the taxa analyzed cluster in eight sub-clades(Clades A1-8).Clade A1 comprises three distinct subclusters corresponding to the genera Diplodia(Diplodia Clade),Neodeightonia(Neodeightonia Clade)and Lasiodiplodia(Lasiodiplodia Clade).Clade A2 clusters into three groups representing Phaeobotryosphaeria(100%),Phaeobotryon(100%)and Barriopsis(94%).Clade A3 incorporates 17 strains that cluster into three well-supported genera(Dothiorella(86%),Spencermartinsia(100%)and Auerswaldia(63%);the position of Macrophomina is not stable.Clade A4 is a single lineage(100%)representing the new genus Botryobambusa.Clade A5 is a wellsupported subclade incorporating Neofussicoccum.Clade A6 represents the type species of Botryosphaeria,three other Botryosphaeria species and two other genera,Neoscytalidium and Cophinforma gen.nov.Clade A7 comprises two Pseudofusicoccum species and Clade A8 has two Aplosporella species.These sub-clades may eventually require separate families but this requires analysis of a much larger dataset.Our data advances the understanding of Botryosphaeriales,there is,however,still much research to be carried out with resolution of families and genera,linkage of sexual and asexual morphs and differentiation of cryptic species.展开更多
Notes on 113 fungal taxa are compiled in this paper,including 11 new genera,89 new species,one new subspecies,three new combinations and seven reference specimens.Awide geographic and taxonomic range of fungal taxa ar...Notes on 113 fungal taxa are compiled in this paper,including 11 new genera,89 new species,one new subspecies,three new combinations and seven reference specimens.Awide geographic and taxonomic range of fungal taxa are detailed.In the Ascomycota the new genera Angustospora(Testudinaceae),Camporesia(Xylariaceae),Clematidis,Crassiparies(Pleosporales genera incertae sedis),Farasanispora,Longiostiolum(Pleosporales genera incertae sedis),Multilocularia(Parabambusicolaceae),Neophaeocryptopus(Dothideaceae),Parameliola(Pleosporales genera incertae sedis),and Towyspora(Lentitheciaceae)are introduced.Newly introduced species are Angustospora nilensis,Aniptodera aquibella,Annulohypoxylon albidiscum,Astrocystis thailandica,Camporesia sambuci,Clematidis italica,Colletotrichum menispermi,C.quinquefoliae,Comoclathris pimpinellae,Crassiparies quadrisporus,Cytospora salicicola,Diatrype thailandica,Dothiorella rhamni,Durotheca macrostroma,Farasanispora avicenniae,Halorosellinia rhizophorae,Humicola koreana,Hypoxylon lilloi,Kirschsteiniothelia tectonae,Lindgomyces okinawaensis,Longiostiolum tectonae,Lophiostoma pseudoarmatisporum,Moelleriella phukhiaoensis,M.pongdueatensis,Mucoharknessia anthoxanthi,Multilocularia bambusae,Multiseptospora thysanolaenae,Neophaeocryptopus cytisi,Ocellularia arachchigei,O.ratnapurensis,Ochronectria thailandica,Ophiocordyceps karstii,Parameliola acaciae,P.dimocarpi,Parastagonospora cumpignensis,Pseudodidymosphaeria phlei,Polyplosphaeria thailandica,Pseudolachnella brevifusiformis,Psiloglonium macrosporum,Rhabdodiscus albodenticulatus,Rosellinia chiangmaiensis,Saccothecium rubi,Seimatosporium pseudocornii,S.pseudorosae,Sigarispora ononidis and Towyspora aestuari.New combinations are provided for Eutiarosporella dactylidis(sexual morph described and illus trated)and Pseudocamarosporium pini.Descriptions,illustrations and/or reference specimens are designated for Aposphaeria corallinolutea,Cryptovalsa ampelina,Dothiorella vidmadera,Ophiocordyceps formosana,Petrakia echinata,Phragmoporthe conformis and Pseudocamarosporium pini.The new species of Basidiomycota are Agaricus coccyginus,A.luteofibrillosus,Amanita atrobrunnea,A.digitosa,A.gleocystidiosa,A.pyriformis,A.strobilipes,Bondarzewia tibetica,Cortinarius albosericeus,C.badioflavidus,C.dentigratus,C.duboisensis,C.fragrantissimus,C.roseobasilis,C.vinaceobrunneus,C.vinaceogrisescens,C.wahkiacus,Cyanoboletus hymenoglutinosus,Fomitiporia atlantica,F.subtilissima,Ganoderma wuzhishanensis,Inonotus shoreicola,Lactifluus armeniacus,L.ramipilosus,Leccinum indoaurantiacum,Musumecia alpina,M.sardoa,Russula amethystina subp.tengii and R.wangii are introduced.Descriptions,illustrations,notes and/or reference specimens are designated for Clarkeinda trachodes,Dentocorticium ussuricum,Galzinia longibasidia,Lentinus stuppeus and Leptocorticium tenellum.The other new genera,species new combinations are Anaeromyces robustus,Neocallimastix californiae and Piromyces finnis from Neocallimastigomycota,Phytophthora estuarina,P.rhizophorae,Salispina,S.intermedia,S.lobata and S.spinosa from Oomycota,and Absidia stercoraria,Gongronella orasabula,Mortierella calciphila,Mucor caatinguensis,M.koreanus,M.merdicola and Rhizopus koreanus in Zygomycota.展开更多
This is a continuity of a series of taxonomic papers where materials are examined,described and novel combinations are proposed where necessary to improve our traditional species concepts and provide updates on their ...This is a continuity of a series of taxonomic papers where materials are examined,described and novel combinations are proposed where necessary to improve our traditional species concepts and provide updates on their classification.In addition to extensive morphological descriptions and appropriate asexual and sexual connections,DNA sequence data are also analysed from concatenated datasets(rDNA,TEF-a,RBP2 and b-Tubulin)to infer phylogenetic relationships and substantiate systematic position of taxa within appropriate ranks.Wherever new species or combinations are being proposed,we apply an integrative approach(morphological and molecular data as well as ecological features wherever applicable).Notes on 125 fungal taxa are compiled in this paper,including eight new genera,101 new species,two new combinations,one neotype,four reference specimens,new host or distribution records for eight species and one alternative morphs.The new genera introduced in this paper are Alloarthopyrenia,Arundellina,Camarosporioides,Neomassaria,Neomassarina,Neotruncatella,Paracapsulospora and Pseudophaeosphaeria.The new species are Alfaria spartii,Alloarthopyrenia italica,Anthostomella ravenna,An.thailandica,Arthrinium paraphaeospermum,Arundellina typhae,Aspergillus koreanus,Asterina cynometrae,Bertiella ellipsoidea,Blastophorum aquaticum,Cainia globosa,Camarosporioides phragmitis,Ceramothyrium menglunense,Chaetosphaeronema achilleae,Chlamydotubeufia helicospora,Ciliochorella phanericola,Clavulinopsis aurantiaca,Colletotrichum insertae,Comoclathris italica,Coronophora myricoides,Cortinarius fulvescentoideus,Co.nymphatus,Co.pseudobulliardioides,Co.tenuifulvescens,Cunninghamella gigacellularis,Cyathus pyristriatus,Cytospora cotini,Dematiopleospora alliariae,De.cirsii,Diaporthe aseana,Di.garethjonesii,Distoseptispora multiseptata,Dis.tectonae,Dis.tectonigena,Dothiora buxi,Emericellopsis persica,Gloniopsis calami,Helicoma guttulatum,Helvella floriforma,H.oblongispora,Hermatomyces subiculosa,Juncaceicola italica,Lactarius dirkii,Lentithecium unicellulare,Le.voraginesporum,Leptosphaeria cirsii,Leptosphaeria irregularis,Leptospora galii,Le.thailandica,Lindgomyces pseudomadisonensis,Lophiotrema bambusae,Lo.fallopiae,Meliola citri-maximae,Minimelanolocus submersus,Montagnula cirsii,Mortierella fluviae,Muriphaeosphaeria ambrosiae,Neodidymelliopsis ranunculi,Neomassaria fabacearum,Neomassarina thailandica,Neomicrosphaeropsis cytisi,Neo.cytisinus,Neo.minima,Neopestalotiopsis cocoe¨s,Neopestalotiopsis musae,Neoroussoella lenispora,Neotorula submersa,Neotruncatella endophytica,Nodulosphaeria italica,Occultibambusa aquatica,Oc.chiangraiensis,Ophiocordyceps hemisphaerica,Op.lacrimoidis,Paracapsulospora metroxyli,Pestalotiopsis sequoiae,Peziza fruticosa,Pleurotrema thailandica,Poaceicola arundinis,Polyporus mangshanensis,Pseudocoleophoma typhicola,Pseudodictyosporium thailandica,Pseudophaeosphaeria rubi,Purpureocillium sodanum,Ramariopsis atlantica,Rhodocybe griseoaurantia,Rh.indica,Rh.luteobrunnea,Russula indoalba,Ru.pseudoamoenicolor,Sporidesmium aquaticivaginatum,Sp.olivaceoconidium,Sp.pyriformatum,Stagonospora forlicesenensis,Stagonosporopsis centaureae,Terriera thailandica,Tremateia arundicola,Tr.guiyangensis,Trichomerium bambusae,Tubeufia hyalospora,Tu.roseohelicospora and Wojnowicia italica.New combinations are given for Hermatomyces mirum and Pallidocercospora thailandica.A neotype is proposed for Cortinarius fulvescens.Reference specimens are given for Aquaphila albicans,Leptospora rubella,Platychora ulmi and Meliola pseudosasae,while new host or distribution records are provided for Diaporthe eres,Di.siamensis,Di.foeniculina,Dothiorella iranica,Do.sarmentorum,Do.vidmadera,Helvella tinta and Vaginatispora fuckelii,with full taxonomic details.An asexual state is also reported for the first time in Neoacanthostigma septoconstrictum.This paper contributes to a more comprehensive update and improved identification of many ascomycetes and basiodiomycetes.展开更多
Demarcation of family,genus and species boundaries in the Diaporthales has been tentative due to uninformative illus-trations and descriptions,overlapping morphological characteristics,misplacement or poor condition o...Demarcation of family,genus and species boundaries in the Diaporthales has been tentative due to uninformative illus-trations and descriptions,overlapping morphological characteristics,misplacement or poor condition of type specimens and shortage of molecular data from ex-type cultures.In this study,we obtained the type specimens or other authentic specimens of diaporthalean taxa from worldwide fungaria.We examined,described and illustrated them.This study is based on morphological characters from type or authentic specimens,details from protologue and original illustrations and molecular data obtained from GenBank.Combined analyses of nrITS,nrLSU,RPB2 and TEF1-a sequence data were used to construct the molecular phylogeny.Additionally,we provided separate phylogenetic trees for families when necessary to show the generic distribution within these families based on suitable gene markers.Based on morphology and phylogeny,we treat 17 genera previously assigned to Diaporthales genera incertae sedis within several families.For some genera we have designated new generic types as they are lacking type species or type species have affiliations with other families.We exclude Anisomycopsis from Diaporthales and place it in Xylariomycetidae genera incertae sedis.Tirisporellaceae,which was previously placed in Tirisporellales is placed in Diaporthales based on phylogeny and morphology.A new combi-nation,Dendrostoma leiphaemia propose for Amphiporthe leiphaemia(Fr.)Butin.Based on the morphological characters and molecular data we accept 27 families and 138 genera within Diaporthales,24 genera in Diaporthales genera incertae sedis and one genus in Xylariomycetidae genera incertae sedis.We provide notes for genera in Diaporthales genera incertae sedis,and excluded and doubtful genera are listed with notes on their taxonomy and phylogeny.展开更多
Numerous new taxa and classifications of Dothideomycetes have been published following the last monograph of families of Dothideomycetes in 2013.A recent publication by Honsanan et al.in 2020 expanded information of f...Numerous new taxa and classifications of Dothideomycetes have been published following the last monograph of families of Dothideomycetes in 2013.A recent publication by Honsanan et al.in 2020 expanded information of families in Dothideo-mycetidae and Pleosporomycetidae with modern classifications.In this paper,we provide a refined updated document on orders and families incertae sedis of Dothideomycetes.Each family is provided with an updated description,notes,including figures to represent the morphology,a list of accepted genera,and economic and ecological significances.We also provide phylogenetic trees for each order.In this study,31 orders which consist 50 families are assigned as orders incertae sedis in Dothideomycetes,and 41 families are treated as families incertae sedis due to lack of molecular or morphological evidence.The new order,Catinellales,and four new families,Catinellaceae,Morenoinaceae Neobuelliellaceae and Thyrinulaceae are introduced.Seven genera(Neobuelliella,Pseudomicrothyrium,Flagellostrigula,Swinscowia,Macroconstrictolumina,Pseudobogoriella,and Schummia)are introduced.Seven new species(Acrospermum urticae,Bogoriella complexoluminata,Dothiorella ostryae,Dyfrolomyces distoseptatus,Macroconstrictolumina megalateralis,Patellaria microspora,and Pseu-domicrothyrium thailandicum)are introduced base on morphology and phylogeny,together with two new records/reports and five new collections from different families.Ninety new combinations are also provided in this paper.展开更多
This is a continuity of a series of taxonomic and phylogenetic papers on the fungi where materials were collected from many countries,examined and described.In addition to extensive morphological descriptions and appr...This is a continuity of a series of taxonomic and phylogenetic papers on the fungi where materials were collected from many countries,examined and described.In addition to extensive morphological descriptions and appropriate asexual and sexual connections,DNA sequence data are also analysed from concatenated datasets to infer phylogenetic relationships and substantiate systematic positions of taxa within appropriate ranks.Wherever new species or combinations are proposed,we apply an integrative approach using morphological and molecular data as well as ecological features wherever applicable.Notes on 112 fungal taxa are compiled in this paper including Biatriosporaceae and Roussoellaceae,Didysimulans gen.nov.,81 new species,18 new host records and new country records,five reference specimens,two new combinations,and three sexual and asexual morph reports.The new species are Amanita cornelii,A.emodotrygon,Angustimassarina alni,A.arezzoensis,A.italica,A.lonicerae,A.premilcurensis,Ascochyta italica,A.rosae,Austroboletus appendiculatus,Barriopsis thailandica,Berkleasmium ariense,Calophoma petasitis,Camarosporium laburnicola,C.moricola,C.grisea,C.ossea,C.paraincrustata,Colletotrichum sambucicola,Coprinopsis cerkezii,Cytospora gelida,Dacrymyces chiangraiensis,Didysimulans italica,D.mezzanensis,Entodesmium italica,Entoloma magnum,Evlachovaea indica,Exophiala italica,Favolus gracilisporus,Femsjonia monospora,Fomitopsis flabellata,F.roseoalba,Gongronella brasiliensis,Helvella crispoides,Hermatomyces chiangmaiensis,H.chromolaenae,Hysterium centramurum,Inflatispora caryotae,Inocybe brunneosquamulosa,I.luteobrunnea,I.rubrobrunnea,Keissleriella cirsii,Lepiota cylindrocystidia,L.flavocarpa,L.maerimensis,Lophiotrema guttulata,Marasmius luculentus,Morenoina calamicola,Moelleriella thanathonensis,Mucor stercorarius,Myrmecridium fluviae,Myrothecium septentrionale,Neosetophoma garethjonesii,Nigrograna cangshanensis,Nodulosphaeria guttulatum,N.multiseptata,N.sambuci,Panus subfasciatus,Paraleptosphaeria padi,Paraphaeosphaeria viciae,Parathyridaria robiniae,Penicillium punicae,Phaeosphaeria calamicola,Phaeosphaeriopsis yuccae,Pleurophoma italica,Polyporus brevibasidiosus,P.koreanus,P.orientivarius,P.parvovarius,P.subdictyopus,P.ulleungus,Pseudoasteromassaria spadicea,Rosellinia mearnsii,Rubroboletus demonensis,Russula yanheensis,Sigarispora muriformis,Sillia italica,Stagonosporopsis ailanthicola,Strobilomyces longistipitatus,Subplenodomus galicola and Wolfiporia pseudococos.The new combinations are Melanomma populina and Rubroboletus eastwoodiae.The reference specimens are Cookeina tricholoma,Gnomoniopsis sanguisorbae,Helvella costifera,Polythrincium trifolii and Russula virescens.The new host records and country records are Ascochyta medicaginicola,Boletellus emodensis,Cyptotrama asprata,Cytospora ceratosperma,Favolaschia auriscalpium,F.manipularis,Hysterobrevium mori,Lentinus sajor-caju,L.squarrosulus,L.velutinus,Leucocoprinus cretaceus,Lophiotrema vagabundum,Nothophoma quercina,Platystomum rosae,Pseudodidymosphaeria phlei,Tremella fuciformis,Truncatella spartii and Vaginatispora appendiculata and three sexual and asexual morphs are Aposphaeria corallinolutea, Dothiorabuxi and Hypocrella calendulina.展开更多
This paper is a compilation of notes on 110 fungal taxa,including one new family,10 new genera,and 76 new species,representing a wide taxonomic and geographic range.The new family,Paradictyoarthriniaceae is introduced...This paper is a compilation of notes on 110 fungal taxa,including one new family,10 new genera,and 76 new species,representing a wide taxonomic and geographic range.The new family,Paradictyoarthriniaceae is introduced based on its distinct lineage in Dothideomycetes and its unique morphology.The family is sister to Biatriosporaceae and Roussoellaceae.The new genera are Allophaeosphaeria(Phaeosphaeriaceae),Amphibambusa(Amphisphaeriaceae),Brunneomycosphaerella(Capnodiales genera incertae cedis),Chaetocapnodium(Capnodiaceae),Flammeascoma(Anteagloniaceae),Multiseptospora(Pleosporales genera incertae cedis),Neogaeumannomyces(Magnaporthaceae),Palmiascoma(Bambusicolaceae),Paralecia(Squamarinaceae)and Sarimanas(Melanommataceae).The newly described species are the Ascomycota Aliquandostipite manochii,Allophaeosphaeria dactylidis,A.muriformia,Alternaria cesenica,Amphibambusa bambusicola,Amphisphaeria sorbi,Annulohypoxylon thailandicum,Atrotorquata spartii,Brunneomycosphaerella laburni,Byssosphaeria musae,Camarosporium aborescentis,C.aureum,C.frutexensis,Chaetocapnodium siamensis,Chaetothyrium agathis,Colletotrichum sedi,Conicomyces pseudotransvaalensis,Cytospora berberidis,C.sibiraeae,Diaporthe thunbergiicola,Diatrype palmicola,Dictyosporium aquaticum,D.meiosporum,D.thailandicum,Didymella cirsii,Dinemasporium nelloi,Flammeascoma bambusae,Kalmusia italica,K.spartii,Keissleriella sparticola,Lauriomyces synnematicus,Leptosphaeria ebuli,Lophiostoma pseudodictyosporium,L.ravennicum,Lophiotrema eburnoides,Montagnula graminicola,Multiseptospora thailandica,Myrothecium macrosporum,Natantispora unipolaris,Neogaeumannomyces bambusicola,Neosetophoma clematidis,N.italica,Oxydothis atypica,Palmiascoma gregariascomum,Paraconiothyrium nelloi,P.thysanolaenae,Paradictyoarthrinium tectonicola,Paralecia pratorum,Paraphaeosphaeria spartii,Pestalotiopsis digitalis,P.dracontomelon,P.italiana,Phaeoisaria pseudoclematidis,Phragmocapnias philippinensis,Pseudocamarosporium cotinae,Pseudocercospora tamarindi,Pseudotrichia rubriostiolata,P.thailandica,Psiloglonium multiseptatum,Saagaromyces mangrovei,Sarimanas pseudofluviatile,S.shirakamiense,Tothia spartii,Trichomerium siamensis,Wojnowicia dactylidicola,W.dactylidis and W.lonicerae.The Basidiomycota Agaricus flavicentrus,A.hanthanaensis,A.parvibicolor,A.sodalis,Cantharellus luteostipitatus,Lactarius atrobrunneus,L.politus,Phylloporia dependens and Russula cortinarioides are also introduced.Epitypifications or reference specimens are designated for Hapalocystis berkeleyi,Meliola tamarindi,Pallidocercospora acaciigena,Phaeosphaeria musae,Plenodomus agnitus,Psiloglonium colihuae,P.sasicola and Zasmidium musae while notes and/or new sequence data are provided for Annulohypoxylon leptascum,A.nitens,A.stygium,Biscogniauxia marginata,Fasciatispora nypae,Hypoxylon fendleri,H.monticulosum,Leptosphaeria doliolum,Microsphaeropsis olivacea,Neomicrothyrium,Paraleptosphaeria nitschkei,Phoma medicaginis and Saccotheciaceae.A full description of each species is provided with light micrographs(or drawings).Molecular data is provided for 90 taxa and used to generate phylogenetic trees to establish a natural classification for species.展开更多
Article 59.1,of the International Code of Nomenclature for Algae,Fungi,and Plants(ICN;Melbourne Code),which addresses the nomenclature of pleomorphic fungi,became effective from 30 July 2011.Since that date,each funga...Article 59.1,of the International Code of Nomenclature for Algae,Fungi,and Plants(ICN;Melbourne Code),which addresses the nomenclature of pleomorphic fungi,became effective from 30 July 2011.Since that date,each fungal species can have one nomenclaturally correct name in a particular classification.All other previously used names for this species will be considered as synonyms.The older generic epithet takes priority over the younger name.Any widely used younger names proposed for use,must comply with Art.57.2 and their usage should be approved by the Nomenclature Committee for Fungi(NCF).In this paper,we list all genera currently accepted by us in Dothideomycetes(belonging to 23 orders and 110 families),including pleomorphic and nonpleomorphic genera.In the case of pleomorphic genera,we follow the rulings of the current ICN and propose single generic names for future usage.The taxonomic placements of 1261 genera are listed as an outline.Protected names and suppressed names for 34 pleomorphic genera are listed separately.Notes and justifications are provided for possible proposed names after the list of genera.Notes are also provided on recent advances in our understanding of asexual and sexual morph linkages in Dothideomycetes.A phylogenetic tree based on four gene analyses supported 23 orders and 75 families,while 35 families still lack molecular data.展开更多
Trichomerium is a genus of foliar epiphytes with the appearance of sooty moulds,mostly occurring on the surface of living leaves and apparently gaining their nutrients from insect exudates.Species have ascostromata wi...Trichomerium is a genus of foliar epiphytes with the appearance of sooty moulds,mostly occurring on the surface of living leaves and apparently gaining their nutrients from insect exudates.Species have ascostromata with setae and develop on a loosely interwoven mycelial mass of dark brown hyphae,while asci have a bitunicate appearance with hyaline ascospores.In this study,we made 16 collections of Trichomerium from Thailand.All were isolated,and the LSU and ITS rDNA gene regions sequenced.Phylogenetic analysis indicated that the Trichomerium species form a monophyletic clade within Chaetothyriales and warrant the introduction of a new family Trichomeriaceae.Bootstrap support for the Chaetothyriales is 100%and clearly separates Trichomeriaceae from Capnodiales which are morphologically very similar.A detailed account of Trichomerium is provided and we describe and illustrate three new species based on morphological and molecular data.We propose that T.foliicola is adopted as the generic type of Trichomerium because it has been impossible to obtain the holotype specimen of T.coffeicola and also no molecular data exists in worldwide databases for this species or genus.展开更多
The family Melanommataceae is widespread in temperate and subtropical regions and species invariably occur on twigs or bark of various woody plants in terrestrial,marine or freshwater habitats.In this paper,the type s...The family Melanommataceae is widespread in temperate and subtropical regions and species invariably occur on twigs or bark of various woody plants in terrestrial,marine or freshwater habitats.In this paper,the type species of 26 genera of the family are re-described and illustrated.A multi-gene phylogeny based on maximum likelihood and Bayesian analyses of LSU,SSU,RPB2 and EF-1αsequence data of species of Melanommataceae is provided.The new genera,Muriformistrickeria,Pseudostrickeria and Thysanolaenae are introduced.Anomalemma is synonymized under Exosporiella.Acrocordiopsis,Astrosphaeriella,Beverwykella,Caryosporella,Sporidesmiella and Pseudotrichia are excluded from Melanommataceae based on molecular phylogenetic analyses.Presently,20 genera are accepted in Melanommataceae.Based on the phylogenetic data,five new species,Byssosphaeria siamensis,Herpotrichia vaginatispora,Pseudostrickeria muriformis,Pseudostrickeria ononidis and Muriformistrickeria rubi,are introduced.展开更多
Micropeltidaceae species are flyspeck fungi which have been subjected to few systematic studies.We re-examined 27 genera which were accepted in the Micropeltidaceae and re-described them based on herbaria materials an...Micropeltidaceae species are flyspeck fungi which have been subjected to few systematic studies.We re-examined 27 genera which were accepted in the Micropeltidaceae and re-described them based on herbaria materials and protologues.Based on morphology and phylogenetic investigations,we transfer Micropeltidaceae to a new order,Micropeltidales(Lecanoromycetes).Genera with bluish or greenish upper walls(Dictyopeltella,Dictyothyriella,Dictyothyrina,Dictyothyrium,Haplopeltheca,Micropeltis,Scolecopeltidium and Stomiopeltopsis)are accepted in the new taxonomic concept for Micropeltidaceae.A molecular clock approach estimated the divergence time of the Micropeltidaceae crown group at 130(165–104)Mya,which also supports its rank as an order(diverging from 220–100 Mya).The evolutionary histories between Micropeltidaceae species and host plants are interpreted by cophylogenetic analyses calibrated by their divergence times.The result indicates that the diversification of Angiospermae(130–80 Mya)fosters the formation of genera of Micropeltidaceae mainly via cospeciation events,and this codivergent period would be an important reference when establishing generic boundaries of epifoliar fungi.展开更多
This article is the 14th in the Fungal Diversity Notes series,wherein we report 98 taxa distributed in two phyla,seven classes,26 orders and 50 families which are described and illustrated.Taxa in this study were coll...This article is the 14th in the Fungal Diversity Notes series,wherein we report 98 taxa distributed in two phyla,seven classes,26 orders and 50 families which are described and illustrated.Taxa in this study were collected from Australia,Brazil,Burkina Faso,Chile,China,Cyprus,Egypt,France,French Guiana,India,Indonesia,Italy,Laos,Mexico,Russia,Sri Lanka,Thailand,and Vietnam.There are 59 new taxa,39 new hosts and new geographical distributions with one new combination.The 59 new species comprise Angustimassarina kunmingense,Asterina lopi,Asterina brigadeirensis,Bartalinia bidenticola,Bartalinia caryotae,Buellia pruinocalcarea,Coltricia insularis,Colletotrichum fexuosum,Colletotrichum thasutense,Coniochaeta caraganae,Coniothyrium yuccicola,Dematipyriforma aquatic,Dematipyriforma globispora,Dematipyriforma nilotica,Distoseptispora bambusicola,Fulvifomes jawadhuvensis,Fulvifomes malaiyanurensis,Fulvifomes thiruvannamalaiensis,Fusarium purpurea,Gerronema atrovirens,Gerronema favum,Gerronema keralense,Gerronema kuruvense,Grammothele taiwanensis,Hongkongmyces changchunensis,Hypoxylon inaequale,Kirschsteiniothelia acutisporum,Kirschsteiniothelia crustaceum,Kirschsteiniothelia extensum,Kirschsteiniothelia septemseptatum,Kirschsteiniothelia spatiosum,Lecanora immersocalcarea,Lepiota subthailandica,Lindgomyces guizhouensis,Marthe asmius pallidoaurantiacus,Marasmius tangerinus,Neovaginatispora mangiferae,Pararamichloridium aquisubtropicum,Pestalotiopsis piraubensis,Phacidium chinaum,Phaeoisaria goiasensis,Phaeoseptum thailandicum,Pleurothecium aquisubtropicum,Pseudocercospora vernoniae,Pyrenophora verruculosa,Rhachomyces cruralis,Rhachomyces hyperommae,Rhachomyces magrinii,Rhachomyces platyprosophi,Rhizomarasmius cunninghamietorum,Skeletocutis cangshanensis,Skeletocutis subchrysella,Sporisorium anadelphiae-leptocomae,Tetraploa dashaoensis,Tomentella exiguelata,Tomentella fuscoaraneosa,Tricholomopsis lechatii,Vaginatispora favispora and Wetmoreana blastidiocalcarea.The new combination is Torula sundara.The 39 new records on hosts and geographical distribution comprise Apiospora guiyangensis,Aplosporella artocarpi,Ascochyta medicaginicola,Astrocystis bambusicola,Athelia rolfsii,Bambusicola bambusae,Bipolaris luttrellii,Botryosphaeria dothidea,Chlorophyllum squamulosum,Colletotrichum aeschynomenes,Colletotrichum pandanicola,Coprinopsis cinerea,Corylicola italica,Curvularia alcornii,Curvularia senegalensis,Diaporthe foeniculina,Diaporthe longicolla,Diaporthe phaseolorum,Diatrypella quercina,Fusarium brachygibbosum,Helicoma aquaticum,Lepiota metulispora,Lepiota pongduadensis,Lepiota subvenenata,Melanconiella meridionalis,Monotosporella erecta,Nodulosphaeria digitalis,Palmiascoma gregariascomum,Periconia byssoides,Periconia cortaderiae,Pleopunctum ellipsoideum,Psilocybe keralensis,Scedosporium apiospermum,Scedosporium dehoogii,Scedosporium marina,Spegazzinia deightonii,Torula fci,Wiesneriomyces laurinus and Xylaria venosula.All these taxa are supported by morphological and multigene phylogenetic analyses.This article allows the researchers to publish fungal collections which areimportant for future studies.An updated,accurate and timely report of fungus-host and fungus-geography is important.We also provide an updated list of fungal taxa published in the previous fungal diversity notes.In this list,erroneous taxa and synonyms are marked and corrected accordingly.展开更多
This is the sixth in a series of papers where we bring collaborating mycologists together to produce a set of notes of several taxa of fungi.In this study we introduce a new family Fuscostagonosporaceae in Dothideomyc...This is the sixth in a series of papers where we bring collaborating mycologists together to produce a set of notes of several taxa of fungi.In this study we introduce a new family Fuscostagonosporaceae in Dothideomycetes.We also introduce the new ascomycete genera Acericola,Castellaniomyces,Dictyosporina and Longitudinalis and new species Acericola italica,Alternariaster trigonosporus,Amarenomyces dactylidis,Angustimassarina coryli,Astrocystis bambusicola,Castellaniomyces rosae,Chaetothyrina artocarpi,Chlamydotubeufia krabiensis,Colletotrichum lauri,Collodiscula chiangraiensis,Curvularia palmicola,Cytospora mali-sylvestris,Dictyocheirospora cheirospora,Dictyosporina ferruginea,Dothiora coronillae,Dothiora spartii,Dyfrolomyces phetchaburiensis,Epicoccum cedri,Epicoccum pruni,Fasciatispora calami,Fuscostagonospora cytisi,Grandibotrys hyalinus,Hermatomyces nabanheensis,Hongkongmyces thailandica,Hysterium rhizophorae,Jahnula guttulaspora,Kirschsteiniothelia rostrata,Koorchalomella salmonispora,Longitudinalis nabanheensis,Lophium zalerioides,Magnibotryascoma mali,Meliola clerodendri-infortunati,Microthyrium chinense,Neodidymelliopsis moricola,Neophaeocryptopus spartii,Nigrograna thymi,Ophiocordyceps cossidarum,Ophiocordyceps issidarum,Ophiosimulans plantaginis,Otidea pruinosa,Otidea stipitata,Paucispora kunmingense,Phaeoisaria microspora,Pleurothecium floriforme,Poaceascoma halophila,Periconia aquatica,Periconia submersa,Phaeosphaeria acaciae,Phaeopoacea muriformis,Pseudopithomyces kunmingnensis,Ramgea ozimecii,Sardiniella celtidis,Seimatosporium italicum,Setoseptoria scirpi,Torula gaodangensis and Vamsapriya breviconidiophora.We also provide an amended account of Rhytidhysteron to include apothecial ascomata and a J?hymenium.The type species of Ascotrichella hawksworthii(Xylariales genera incertae sedis),Biciliopsis leptogiicola(Sordariomycetes genera incertae sedis),Brooksia tropicalis(Micropeltidaceae),Bryochiton monascus(Teratosphaeriaceae),Bryomyces scapaniae(Pseudoperisporiaceae),Buelliella minimula(Dothideomycetes genera incertae sedis),Carinispora nypae(Pseudoastrosphaeriellaceae),Cocciscia hammeri(Verrucariaceae),Endoxylina astroidea(Diatrypaceae),Exserohilum turcicum(Pleosporaceae),Immotthia hypoxylon(Roussoellaceae),Licopolia franciscana(Vizellaceae),Murispora rubicunda(Amniculicolaceae)and Doratospora guianensis(synonymized under Rizalia guianensis,Trichosphaeriaceae)were reexamined and descriptions,illustrations and discussion on their familial placement are given based on phylogeny and morphological data.New host records or new country reports are provided for Chlamydotubeufia huaikangplaensis,Colletotrichum fioriniae,Diaporthe subclavata,Diatrypella vulgaris,Immersidiscosia eucalypti,Leptoxyphium glochidion,Stemphylium vesicarium,Tetraploa yakushimensis and Xepicula leucotricha.Diaporthe baccae is synonymized under Diaporthe rhusicola.A reference specimen is provided for Periconia minutissima.Updated phylogenetic trees are provided for most families and genera.We introduce the new basidiomycete species Agaricus purpurlesquameus,Agaricus rufusfibrillosus,Lactifluus holophyllus,Lactifluus luteolamellatus,Lactifluus pseudohygrophoroides,Russula benwooii,Russula hypofragilis,Russula obscurozelleri,Russula parapallens,Russula phoenicea,Russula pseudopelargonia,Russula pseudotsugarum,Russula rhodocephala,Russula salishensis,Steccherinum amapaense,Tephrocybella constrictospora,Tyromyces amazonicus and Tyromyces angulatus and provide updated trees to the genera.We also introduce Mortierella formicae in Mortierellales,Mucoromycota and provide an updated phylogenetic tree.展开更多
Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human endeavours.These taxa often have complex and poorly understood life cycles,lack observab...Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human endeavours.These taxa often have complex and poorly understood life cycles,lack observable,discriminatory morphological characters,and may not be amenable to in vitro culturing.As a result,species identification is frequently difficult.Molecular(DNA sequence)data have emerged as crucial information for the taxonomic identification of plant pathogenic fungi,with the nuclear ribosomal internal transcribed spacer(ITS)region being the most popular marker.However,international nucleotide sequence databases are accumulating numerous sequences of compromised or low-resolution taxonomic annotations and substandard technical quality,making their use in the molecular identification of plant pathogenic fungi problematic.Here we report on a concerted effort to identify high-quality reference sequences for various plant pathogenic fungi and to re-annotate incorrectly or insufficiently annotated public ITS sequences from these fungal lineages.A third objective was to enrich the sequences with geographical and ecological metadata.The results-a total of 31,954 changes-are incorporated in and made available through the UNITE database for molecular identification of fungi(http://unite.ut.ee),including standalone FASTA files of sequence data for local BLAST searches,use in the next-generation sequencing analysis platforms QIIME and mothur,and related applications.The present initiative is just a beginning to cover the wide spectrum of plant pathogenic fungi,and we invite all researchers with pertinent expertise to join the annotation effort.展开更多
基金funded by the National Science,Research and Innovation Fund:Thailand Science Research Innovation(Basic Research Fund 2022 and 2023)entitled‘Biodiversity,taxonomy and phylogeny of Colletotrichum on Citrus and Mango in northern Thailand(662A01002 and 672A01002)supported by the Mae Fah Luang University grant entitled‘Fungi associated with postharvest diseases of fruits in northern Thailand’(671C01002)+10 种基金supported by the following projects:National Natural ScienceFoundation of China(No.31972222)Program of Introducing Talentsof Discipline to Universities of China(111 Program,D20023)Guizhou Provincial Science and Technology Department Platform Project(YWZ[2024]004)Guizhou University Research and Innovation Team Project[2024]05funded by the National Bamboo Mission,New Delhi titled Plantation Technology for Jigat species(No.KFRI RP 793/2019)Highlevel Talents in Zhongkai University of Agriculture and Engineering,grant no:J2201080102 and the Innovative team program of the Department of Education of Guangdong Province(2022KCXTD015 and 2022ZDJS020)the financial support of the Distinguished Scientist Fellowship Program of King Saud University,Riyadh,Saudi Arabia and the Chinese Research Fund(project no E1644111K1)the support from UIDB/04046/2020(https://doi.org/10.54499/UIDB/04046/2020)and UIDP/04046/2020(https://doi.org/10.54499/UIDP/04046/2020)Centre grants from FCT,Portugal(to BioISI)the UP System Balik PhD Program(OVPAA-BPhD-2022–02)entitled,“Unraveling the hidden diversity of aquatic fungi from Panay Island,Philippines”.Senanayake IC thanks to Yunnan Revitalization Talents Support Plan(High-End Foreign Experts Programs)Beijing Natural Science Foundation-International Scientist Project(project number:1S24085)for the financial supportThe National Research Council of Thailand(NRCT)(Grant No.N41A640165).
文摘This paper represents the fifth One Stop Shop(OSS)series contribution.This series provides background,disease symptoms,pathogen biology and epidemiology(when available)distribution,hosts for the treated genera,and important gene regions for a better resolution.Species that have pathogenic data are also provided under each genus.This fifth OSS paper treats 25 genera of phytopathogenic fungi:Allophoma,Alternaria,Bipolaris,Boeremia,Calonectria,Calophoma,Campylocarpon,Clonastachys,Corynespora,Cryphonectria,Diaporthe,Diplocarpon,Epicoccum,Eutiarosporella,Ganoderma,Hypomyces,Lasiodiplodia,Monilinia,Neocordana,Phragmidium,Pileolaria,Pseudocercospora,Rhynchosporium,Scytalidium and Sphaeropsis.
基金supported by the Strategic Priority Research Program of the Chinese Academy of Sciences,Grant No.XDB31000000Naritsada Thongklang would like to thank Thailand research fund grants“Study of saprobic Agaricales in Thailand to find new industrial mushroom products”(Grant No.DBG6180015)+10 种基金Mae Fah Luang University grant“Optimal conditions for domestication and biological activities of selected species of Ganoderrma”(Grant No.621C1535)K.D.Hyde and Naritsada Thongklang would like to thanks to Thailand research fund grants“Domestication and bioactive evaluation of Thai Hymenopellis,Oudemansiella,Xerula and Volvariella species(basidiomycetes)”(Grant No.DBG6180033)K.D.Hyde thanks the financial support from the Visiting Professor grant at Chiang Mai University,Thailand and KIB.The authors acknowledge the contribution of M.M.Vasanthakumari,K.M.Manasa and P.Rajani,in various stages of preparation of the manuscript.Samantha C.Karunarathna thanks CAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Number 2018PC0006)the National Science Foundation.Associate Professor R Jeewon thanks University of Mauritius for support.Binu C.Samarakoon offers her sincere gratitude to the“National Research Council of Thailand”(NRCT Grant No.256108A3070006)for the financial supportPeter E Mortimer would like to thank the National Science Foundation of China and the Chinese Academy of Sciences for financial support under the following Grants:41761144055,41771063,Y4ZK111B01M.Doilom would like to thank Chiang Mai University,the 5th batch of Postdoctoral Orientation Training Personnel in Yunnan Province and the 64th batch of China Postdoctoral Science Foundation.T.S.Suryanarayanan thanks the United States-India Educational Foundation(USIEF)New Delhi and the Fulbright Scholar Program(USA)for the award of a Fulbright-Nehru Senior Researcher grant to conduct research in the Department of Chemistry and Biochemistry,The Ohio State University,USA.Thanks to Research and Researchers for Industries Grant(PHD57I0015)for financial support to Boontiya Chuankid.Birthe Sandargo is grateful to the Deutsche Forschungsgemeinschaft(DFG)for a PhD grant.Clara Chepkirui is indebted to a PhD stipend from the German Academic Exchange Service(DAAD)and the Kenya National Council for Science and Technology(NACOSTI)Kevin D Hyde would also like to thank the National Research Council of Thailand grants Thailands’Fungal Diversity,Solving Problems and Creating Biotechnological Products(Grant No.61201321016)This work is partly supported by the Department of Biotechnology,Government of India,New Delhi(Chemical Ecology of the North East Region(NER)of India:A collaborative programme Linking NER and Bangalore ResearchersDBT-NER/Agri/24/2013)and Indian Council of Agricultural Research(ICAR-CAAST-Project F.No./NAHEP/CAAST/2018-19)Government of India,New Delhi.
文摘Fungi are an understudied,biotechnologically valuable group of organisms.Due to the immense range of habitats that fungi inhabit,and the consequent need to compete against a diverse array of other fungi,bacteria,and animals,fungi have developed numerous survival mechanisms.The unique attributes of fungi thus herald great promise for their application in biotechnology and industry.Moreover,fungi can be grown with relative ease,making production at scale viable.The search for fungal biodiversity,and the construction of a living fungi collection,both have incredible economic potential in locating organisms with novel industrial uses that will lead to novel products.This manuscript reviews fifty ways in which fungi can potentially be utilized as biotechnology.We provide notes and examples for each potential exploitation and give examples from our own work and the work of other notable researchers.We also provide a flow chart that can be used to convince funding bodies of the importance of fungi for biotechnological research and as potential products.Fungi have provided the world with penicillin,lovastatin,and other globally significant medicines,and they remain an untapped resource with enormous industrial potential.
基金This work was carried out using a grant to the first author by the Office of the Higher Education Commission of Thailand.
文摘Sooty moulds are a remarkable,but poorly understood group of fungi.They coat fruits and leaves superficially with black mycelia,which reduces photosynthesis rates of host plants.Few researchers have,however,tried to quantify their economic importance.Sooty moulds have been well-studied at the morphological level,but they are poorly represented in a natural classification based on phylogeny.Representatives are presently known in Antennulariellaceae,Capnodiaceae,Chaetothyriaceae,Coccodiniaceae,Euantennariaceae,Metacapnodiaceae and Trichomeriaceae and several miscellaneous genera.However,molecular data is available for only five families.Most sooty mould colonies comprise numerous species and thus it is hard to confirm relationships between genera or sexual and asexual states.Future studies need to obtain single spore isolates of species to test their phylogenetic affinities and linkages between morphs.Next generation sequencing has shown sooty mould colonies to contain many more fungal species than expected,but it is not clear which species are dominant or active in the communities.They are more common in tropical,subtropical and warm temperate regions and thus their prevalence in temperate regions is likely to increase with global warming.Sooty moulds are rarely parasitized by fungicolous taxa and these may have biocontrol potential.They apparently grow in extreme environments and may be xerophilic.This needs testing as xerophilic taxa may be of interest for industrial applications.Sooty moulds grow on sugars and appear to out-compete typical“weed”fungi and bacteria.They may produce antibiotics for this purpose and their biochemical potential for obtaining novel bioactive compounds for medical application is underexplored.
基金CAS President’s International Fellowship Initiative(PIFI)for Young Staff 2019-2021(grant number 2019FY0003)the Research Fund from China Postdoctoral Science Foundation(Grant No.Y71B283261)+45 种基金the Yunnan Provincial Department of Human Resources and Social Security(Grant No.Y836181261)National Science Foundation of China(NSFC)project code 31850410489 for financial research supportthe Foreign Experts Bureau of Yunnan Province,Foreign Talents Program(2018,Grant No.YNZ2018002)Thailand Research grants entitled Biodiversity,phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans(Grant No:RSA5980068)the future of specialist fungi in a changing climate:baseline data for generalist and specialist fungi associated with ants,Rhododendron species and Dracaena species(Grant No:DBG6080013)Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion(Grant No:RDG6130001)the Key Research Program of Frontier Sciences of the Chinese Academy of Sciences(Grant No.QYZDY-SSW-SMC014)the National Science Foundation of China and the Chinese Academy of Sciences for financial support under the following grants:41761144055,41771063 and Y4ZK111B01the Fonds de la Recherche Scientifique-FNRS(Belgium)for travel grantsCAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Grant No.2018PC0006)the National Science Foundation of China(NSFC,project code 31750110478)CAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Grant No.2019PC0008)supported under the Distinguished Scientist Fellowship Program(DSFP),King Saud University,Kingdom of Saudi Arabia.the Kerala State Council for Science,Technology and Environment(KSCSTE)in the form of a PhD fellowship(Grant No.001/FSHP/2011/CSTE)the Principal Chief Conservator of forests,Kerala State,for granting permission(No.WL10-4937/2012,dated 03-10-2013)to collect agarics from the forests of Keralathe Council of Scientific&Industrial Research(CSIR),New Delhi,India,in the form of an award of CSIR Research Associateship(09/043(0178)2K17 dated:31/03/2017)the National Natural Science Foundation of China(Project ID:31470152 and 31360014)the Foundation of Innovative Group of Edible Mushrooms Industry of Beijing(Project ID:BAIC05-2017)the 5th batch of Postdoctoral Orientation Training Personnel in Yunnan Province and the 64th batch of China Postdoctoral Science FoundationCNPq for the Ph.D scholarship of RLMA(140283/2016-1)Pos-Graduacao em Biologia de Fungos(UFPE,Brazil)Capes(Capes-SIU 008/13)CNPq(PQ 307601/2015-3)FACEPE(APQ 0375-2.03/15)for funding the researchfinancial support from the Agreement ENDESA and San Ignacio de Huinay Foundations and Consejo Superior de Investigaciones Cientificas,CSIC(Projects No.2011HUIN10,2013CL0012,2014CL0011)the AECID(Agencia Espanola de Cooperacion Internacional para el Desarrollo)and Plan Nacional I+D+i project no.CGL2015-67459-Psupported by a Predoctoral Grant from the Ministerio de Economıa y Competitividad(Spain)(BES-2016-077793)Croatian Science Foundation for their partial support under the project HRZZ-IP-2018-01-1736(ForFungiDNA)supported by the Graduate Program for the Undiscovered Taxa of Koreathe Project on Survey and Discovery of Indigenous Fungal Species of Korea funded by NIBR and Project on Discovery of Fungi from Freshwater and Collection of Fungarium funded by NNIBR of the Ministry of Environment(MOE)in part carried out with the support of Cooperative Research Program for Agriculture Science and Technology Development(PJ013744)Rural Development Administration,and BK21 PLUS program funded by Ministry of Education,Republic of Koreathe CASTWAS for the PhD Fellowship.Sanjay K.Singh,Paras Nath Singh,Shiwali Rana and Frank Kwekucher Ackah thank Director,MACS,Agharkar Research Institute,Pune,India for providing facilities.Shiwali Rana and Frank Kwekucher Ackah thank UGC(Junior Research Fellowship)and DST,Govt.of India(CV Raman Fellowship for African Researchers),respectively.Gen-Nuo Wang,Huang Zhang,Wei Dong and Xian-Dong Yu thank the National Natural Science Foundation of China(Project ID:NSF 31500017).Bandarupalli Devadatha and V.Venkateswara Sarma thank The Ministry of Earth sciences,Govt.of India(Sanction order:MOES/36/OO1S/Extra/40/2014/PC-IV dt.14.1.2015)for a funding of the project,T,District Forest Office,Tiruvarur,Tamil Nadu and PCCF(Head of Forest Force),Chennai,Tamil Nadu Forest Department for providing permission to collect samples from Muthupet mangroves,and Department of Biotechnology,Pondicherry University is thanked for providing the facilities.Myung Soo Park,Seung-Yoon Oh and Young Woon Lim thank the Marine Bio Resource Bank Program of the Ministry of Ocean&Fisheries,Korea.Olinto Pereira thanks the CAPES,CNPq and FAPEMIG for financial support.Neven Matocˇec,Ivana Kusˇan and Margita Jadan express their gratitude to Livio Lorenzon,Enrico Bizio and Raffaella Trabucco(MCVE)for their kind help with loan of Sarcopeziza sicula type materialparts of their research were financed by Public Institutions Sjeverni Velebit National Park and Paklenica National Parkthe National Natural Science Foundation of China(No.NSFC 31760013,NSFC 31260087,NSFC 31460561)the Scientific Research Foundation of Yunnan Provincial Department of Education(2017ZZX186)utilization of endophytes and the Thousand Talents Plan,Youth Project of Yunnan Provincesthe National Natural Science Foundation of China(No.31760014)and the Science and Technology Foundation of Guizhou Province(No.[2017]5788)Thailand Research Fund(TRF)Grant No MRG6080089 for financial research supportThe Royal Golden Jubilee Ph.D.Program(PHD60K0147)under Thailand Research Fund,for financial research supports on project entitle"Fungi on limestone outcrops from southern Thailand to lower himalyas"the National Research Council of Thailand(Grant No.61215320023,61215320013)the Thailand Research Fund(Grant No.TRG6180001)for research financial supportthe Thailand Research Fund(RTA 5880006)Chiang Mai University for partially support this research workChina-Thailand Joint Lab on Microbial Biotechnology(Most KY201701011)for financial supportthe Mushroom Research Foundation for research financial support and PhD Fellowships.
文摘This article is the ninth in the series of Fungal Diversity Notes,where 107 taxa distributed in three phyla,nine classes,31 orders and 57 families are described and illustrated.Taxa described in the present study include 12 new genera,74 new species,three new combinations,two reference specimens,a re-circumscription of the epitype,and 15 records of sexualasexual morph connections,new hosts and new geographical distributions.Twelve new genera comprise Brunneofusispora,Brunneomurispora,Liua,Lonicericola,Neoeutypella,Paratrimmatostroma,Parazalerion,Proliferophorum,Pseudoastrosphaeriellopsis,Septomelanconiella,Velebitea and Vicosamyces.Seventy-four new species are Agaricus memnonius,A.langensis,Aleurodiscus patagonicus,Amanita flavoalba,A.subtropicana,Amphisphaeria mangrovei,Baorangia major,Bartalinia kunmingensis,Brunneofusispora sinensis,Brunneomurispora lonicerae,Capronia camelliaeyunnanensis,Clavulina thindii,Coniochaeta simbalensis,Conlarium thailandense,Coprinus trigonosporus,Liua muriformis,Cyphellophora filicis,Cytospora ulmicola,Dacrymyces invisibilis,Dictyocheirospora metroxylonis,Distoseptispora thysanolaenae,Emericellopsis koreana,Galiicola baoshanensis,Hygrocybe lucida,Hypoxylon teeravasati,Hyweljonesia indica,Keissleriella caraganae,Lactarius olivaceopallidus,Lactifluus midnapurensis,Lembosia brigadeirensis,Leptosphaeria urticae,Lonicericola hyaloseptispora,Lophiotrema mucilaginosis,Marasmiellus bicoloripes,Marasmius indojasminodorus,Micropeltis phetchaburiensis,Mucor orantomantidis,Murilentithecium lonicerae,Neobambusicola brunnea,Neoeutypella baoshanensis,Neoroussoella heveae,Neosetophoma lonicerae,Ophiobolus malleolus,Parabambusicola thysanolaenae,Paratrimmatostroma kunmingensis,Parazalerion indica,Penicillium dokdoense,Peroneutypa mangrovei,Phaeosphaeria cycadis,Phanerochaete australosanguinea,Plectosphaerella kunmingensis,Plenodomus artemisiae,P.lijiangensis,Proliferophorum thailandicum,Pseudoastrosphaeriellopsis kaveriana,Pseudohelicomyces menglunicus,Pseudoplagiostoma mangiferae,Robillarda mangiferae,Roussoella elaeicola,Russula choptae,R.uttarakhandia,Septomelanconiella thailandica,Spencermartinsia acericola,Sphaerellopsis isthmospora,Thozetella lithocarpi,Trechispora echinospora,Tremellochaete atlantica,Trichoderma koreanum,T.pinicola,T.rugulosum,Velebitea chrysotexta,Vicosamyces venturisporus,Wojnowiciella kunmingensis and Zopfiella indica.Three new combinations are Baorangia rufomaculata,Lanmaoa pallidorosea and Wojnowiciella rosicola.The reference specimens of Canalisporium kenyense and Tamsiniella labiosa are designated.The epitype of Sarcopeziza sicula is re-circumscribed based on cyto-and histochemical analyses.The sexual-asexual morph connection of Plenodomus sinensis is reported from ferns and Cirsium for the first time.In addition,the new host records and country records are Amanita altipes,A.melleialba,Amarenomyces dactylidis,Chaetosphaeria panamensis,Coniella vitis,Coprinopsis kubickae,Dothiorella sarmentorum,Leptobacillium leptobactrum var.calidus,Muyocopron lithocarpi,Neoroussoella solani,Periconia cortaderiae,Phragmocamarosporium hederae,Sphaerellopsis paraphysata and Sphaeropsis eucalypticola.
基金We also thank Siriporn Luesuwan for arranging the loan of specimens from various herbaria.A.Ariyawansa and J.C Kang are grateful to the International collaboration plan of Science and Technology at Guizhou Province(contract No.[2012]7006)the construction of innovation talent team of Science and Technology at Guizhou Province(contract No.[2012]4007)+19 种基金China.D.J.Bhat is thankful to MFU for a Visiting Professorship during the tenure of which this paper was finalized.D.L.Hawksworth contributed to this work while in receipt of support from the Spanish Ministerio de Ciencia e Innovación(CGL2011-25003)Haixia Wu would like to thank the Grant for Essential Scientific Research of National Non-profit Institute to funds for research(No.CAFYBB2007002)thanks Xiaoming Chen,Ying Feng and Chen Hang(The Research Institute of Resource Insects,Chinese Academy of Forestry,China)for their valuable help.Jian-Kui Liu would like to thank Manfred Binder for providing valuable suggestions and kind assistance on phylogenetic analysisWe would like to thank MFU grant No.56101020032 for funding to study taxonomy and phylogeny of selected families of DothideomycetesJiye Yan and Xinghong Li would like to thank CARS-30 for funds.K.Tanaka would like to thank the Japan Society for the Promotion of Science(JSPS,25440199)for financial supportK.L.Pang would like to thank National Science Council of Taiwan for financial support(NSC101-2621-B-019-001-MY3).L.Muggia is grateful to the Austrian Science Foundation for financial support(FWF,P24114-B16 and Herta-Firnberg Project T481-B20)M.Doilom would like to thank the Thailand Research Fund through the Royal Golden Jubilee(RGJ)Ph.D.Program grant No.Ph.D./0072/2553 in 4.S.M.F./53/A.2MP Nelsen and R Lücking are grateful to the NSF(DEB 0715660“Neotropical Epiphytic Microlichens-An Innovative Inventory of a Highly Diverse yet Little Known Group of Symbiotic Organisms”DEB 0717476“Systematics of Dothideomycetes”)MP Nelsen also acknowledges a Brown Family Fellowship through the Field Museum,a William Harper Rainey Fellowship through the University of Chicago,and support through the Committee on Evolutionary Biology at the University of Chicago.R.Phookamsak would like to thank the Royal Golden Jubilee Ph.D.Program(PHD/0090/2551)under the Thailand Research Fund for scholarship supportS.A.Alias would like to thank Program Rakan University Malaya(PRPUM)-Phylogeny,Taxonomy,Relationships and Biotechnological Potential of Sooty Moulds.S.Boonmee also thanks Amy Y.Rossman and the U.S.Department of Agriculture Agricultural Research Service,Systematic Mycology and Microbiology Lab(SMML)USA for laboratory,funding support and advice on her work.S.Boonmee and P.Chomnunti would like to thank TRF/BIOTEC program Biodiversity Research and Training Grant BRT R_251181,BRT R_253012the Mushroom Research Foundation,Chiang Rai Province for funding support.S.Wikee would like to thank the Thailand Research Fund through the Royal Golden Jubilee Ph.D.Program agreement No PhD/0198/2552S.Wikee and JK Liu would like to thank The National Research Council of Thailand(NRCT)for the award of grant No 55201020002 to study the genus Phyllosticta in ThailandS.Suetrong acknowledges the financial support by TRF/BIOTEC program Biodiversity Research and Training Grant BRT R_351004 and BRT R_325015 to study marine fungi of ThailandSuetrong also thanks Morakot Tanticharoen,Kanyawim Kirtikara and Lily Eurwilaichitr,BIOTEC,Bangkok for their continued interest and support.Supalak Yacharoen,J.Monkai and K.D.Hyde would like to thank the Thailand Research Fund(BRG5280002)for financial supportGareth Jones is supported by the Distinguished Scientist Fellowship Program(DSFP),King Saud University,Saudi Arabia.Y.Wang would like to thank The International Scientific Cooperated Project of Guizhou Province(No[2013]7004)Yongxiang Liu would like to thank the Guizhou Research Fund(QKHZYZ[2010]5031 and QNKYYZX[2012]010)for financial supportHarrie Sipman is thanked for comments on part of the manuscript.
文摘Dothideomycetes comprise a highly diverse range of fungi characterized mainly by asci with two wall layers(bitunicate asci)and often with fissitunicate dehiscence.Many species are saprobes,with many asexual states comprising important plant pathogens.They are also endophytes,epiphytes,fungicolous,lichenized,or lichenicolous fungi.They occur in terrestrial,freshwater and marine habitats in almost every part of the world.We accept 105 families in Dothideomycetes with the new families Anteagloniaceae,Bambusicolaceae,Biatriosporaceae,Lichenoconiaceae,Muyocopronaceae,Paranectriellaceae,Roussoellaceae,Salsugineaceae,Seynesiopeltidaceae and Thyridariaceae introduced in this paper.Each family is provided with a description and notes,including asexual and asexual states,and if more than one genus is included,the type genus is also characterized.Each family is provided with at least one figure-plate,usually illustrating the type genus,a list of accepted genera,including asexual genera,and a key to these genera.A phylogenetic tree based on four gene combined analysis add support for 64 of the families and 22 orders,including the novel orders,Dyfrolomycetales,Lichenoconiales,Lichenotheliales,Monoblastiales,Natipusillales,Phaeotrichales and Strigulales.The paper is expected to provide a working document on Dothideomycetes which can be modified as new data comes to light.It is hoped that by illustrating types we provide stimulation and interest so that more work is carried out in this remarkable group of fungi.
基金the Foreign Experts Bureau of Yunnan Province,Foreign Talents Program(2018,Grant No.YNZ2018002)Thailand Research grants entitled Biodiversity,phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans(Grant No.RSA5980068)+60 种基金the future of specialist fungi in a changing climate:baseline data for generalist and specialist fungi associated with ants,Rhododendron species and Dracaena species(Grant No.DBG6080013)Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion(Grant No.RDG6130001)Chiang Mai University for the award of visiting ProfessorCAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Grant No.2018PC0006)the National Science Foundation of China(NSFC,project code 31750110478)supported by the Graduate Program for the Undiscovered Taxa of Koreain part by the Project on Survey and Discovery of Indigenous Fungal Species of Korea funded by NIBR and Project on Discovery of Fungi from Freshwater and Collection of Fungarium funded by NNIBR of the Ministry of Environment(MOE)in part carried out with the support of Cooperative Research Program for Agriculture Science and Technology Development(PJ013744),Rural Development Administration,Republic of Koreain part supported by the BK21 plus program through the National Research Foundation(NRF)funded by the Ministry of Education of Korea.Jian-Kui Liu thanks the National Natural Science Foundation of China(NSFC 31600032)the CNPq(Conselho Nacional de Desenvolvimento Cientifico e Tecnologico)for a research grant(309058/2015-5)funding for collecting trips(401186/2014-8)a collaborative project with RL as Special Visiting Professor(314570/2014-4)Funding for phylogenetic work on Graphidaceae was provided by a grant from the National Science Foundation(NSF)to The Field Museum:DEB-1025861"ATM-Assembling a taxonomic monograph:The lichen family Graphidaceae"PI Thorsten Lumbsch,CoPI Robert Luckingthe CAPES,CNPq,and FAPEMIG for financial support and ICMBio/FLONA-Paraopeba for providing facilities and permits for the exploration surveys of the mycodiversity in their protected areasthe Graduate Program for the Biodiversity and Biotechnology Network of the Legal Amazon(UFPA-MPEG,Brazil)the Conselho Nacional de Desenvolvimento Cientifico Programa de Capacitacao for the scholarship to AMSS(Programa de Capacitacao Institucional 303073/2018-7)CNPq(Sisbiota 563342/2010-2,PROTAX 562106/2010-3)FACEPE(APQ 0788-2.03/12)for funding this researchsupport by a long-term research development project No.RVO 67985939 of the Czech Academy of Sciences,Institute of Botanyfinancial support from Conselho Nacional de Pesquisa e Desenvolvimento Cientifico(CNPq)National Natural Science Foundation of China(Project IDs GJL:31500013,RLZ:31470152 and 31360014)for financial supportjoint project of the Charles Darwin Foundation(CDF)and the Galapagos National Park(DPNG),part of a national biodiversity assessment"Biodiversidad Genetica del Ecuador"led by the Instituto Nacional de Biodiversidad del Ecuador(INABIO)Thailand Research Fund(TRF)Grant No.MRG6080089 entitledTaxonomy and phylogeny of foliar fungi from Mangrove and to Dr.Putarak Chomnuntithe Thailand Research Fund(No.TRG6180001)the National Research Council of Thailand(No.61215320023)Plant Genetic Conservation Project under the Royal Initiation of Her Royal Highness Princess Maha Chakri Sirindhorn-Mae Fah Luang Universitygrateful to Croatian Science Foundation for their financial support under the project HRZZ-IP-2018-01-1736(For-FungiDNA)the Royal Golden Jubilee PhD Program under Thailand Research Fund(RGJ)for a personal grant to C.Phukhamsakda(The scholarship no.PHD/0020/2557 to study towards a PhD)China-Thailand Joint Lab on Microbial Biotechnology(Most KY201701011)for financial supportCAS President’s International Fellowship Initiative(PIFI)for young staff(Grant No.2019FYC0003)the Research Fund from China Postdoctoral Science Foundation(Grant No.Y71B283261)the Yunnan Provincial Department of Human Resources and Social Security(Grant No.Y836181261)National Science Foundation of China(NSFC)project code 31850410489 for financial supportthe National Research Council of Thailand(Grant No.256108A3070006)for financial supportthe National Natural Science Foundation of China(No.31760014)the Science and Technology Foundation of Guizhou Province(No.[2016]2863)partially supported by Chiang Mai Universitythe Graduate Program for the Biodiversity and Biotechnology Network of the Legal Amazon(UFPA-MPEG),the Museu Paraense Emilio Goeldi(MPEG),the Universidade do Estado do Amapa and the Universidade Federal de Pernambuco for the logistical support of their laboratories and herbariaCNPq for the scholarship of AMSS(Programa de Capacitacao Institucional 303073/2018-7)CNPq(Sisbiota 563342/2010-2,PROTAX 562106/2010-3)and FACEPE(APQ 0788-2.03/12)for funding this researchthe ATM of the Paris'Museum and"l'Institut Ecologie et Environnement"(CNRS-INEE)for funding the field trip with Shelly Masi to Africaall the practical help and sharing her experiencemade possible through research permit 034/MENESR/DIRCAB/DGESRSTI/DRSTSPI/SSSTI/16 from the"Ministere de l'education nationale,de l’enseignement superieur et de la recherche scientifique"of the Central African Republicfinanced in part by the National Geographic Society(grants 6365-98,7921-05)in more recent years by the ATM-project"Past and present biodiversity"of the Museum national d’histoire naturelle(Dirs.Ph.Janvier and S.Peigne)University of Mauritius for research supportthe Thailand Research Fund(PHD60K0147)contribution number 2248 of the Charles Darwin Foundation for the Galapagos IslandsLakmali Dissanayake and Binu Samarakoon for their supportCAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(Number 2019PC0008)the National Science Foundation of China and the Chinese Academy of Sciences for financial support under the following grants:41761144055,41771063 and Y4ZK111B01CAS President’s International Fellowship Initiative(Grant No.2018VBB0021)German Academic Exchange Service Fellowship(Grant No.57314018)Ministry of innovative development of the Republic of Uzbekistan(Projects No.P3-2014-0830174425 and PP-20170921183)for funding his research projectsthe 5th batch of Postdoctoral Orientation Training Personnel in Yunnan Province(Grant No.Y934283261)the 64th batch of China Postdoctoral Science Foundation(Grant No.Y913082271)their kind support on manuscript writing.Jianchu Xu thanks Key Research Program of Frontier Sciences"Response of Asian mountain ecosystems to global change",CAS(Grant No.QYZDYSSW-SMC014)the 64th batch of China Postdoctoral Science Foundation(Grant No.Y913083271)the support from UID/MULTI/04046/2019 Research Unit grant from FCT,Portugal to BioISI.
文摘This article is the tenth series of the Fungal Diversity Notes,where 114 taxa distributed in three phyla,ten classes,30 orders and 53 families are described and illustrated.Taxa described in the present study include one new family(viz.Pseudoberkleasmiaceae in Dothideomycetes),five new genera(Caatingomyces,Cryptoschizotrema,Neoacladium,Paramassaria and Trochilispora)and 71 new species,(viz.Acrogenospora thailandica,Amniculicola aquatica,A.guttulata,Angustimassarina sylvatica,Blackwellomyces lateris,Boubovia gelatinosa,Buellia viridula,Caatingomyces brasiliensis,Calophoma humuli,Camarosporidiella mori,Canalisporium dehongense,Cantharellus brunneopallidus,C.griseotinctus,Castanediella meliponae,Coprinopsis psammophila,Cordyceps succavus,Cortinarius minusculus,C.subscotoides,Diaporthe italiana,D.rumicicola,Diatrypella delonicis,Dictyocheirospora aquadulcis,D.taiwanense,Digitodesmium chiangmaiense,Distoseptispora dehongensis,D.palmarum,Dothiorella styphnolobii,Ellisembia aurea,Falciformispora aquatic,Fomitiporia carpinea,F.lagerstroemiae,Grammothele aurantiaca,G.micropora,Hermatomyces bauhiniae,Jahnula queenslandica,Kamalomyces mangrovei,Lecidella yunnanensis,Micarea squamulosa,Muriphaeosphaeria angustifoliae,Neoacladium indicum,Neodidymelliopsis sambuci,Neosetophoma miscanthi,N.salicis,Nodulosphaeria aquilegiae,N.thalictri,Paramassaria samaneae,Penicillium circulare,P.geumsanense,P.mali-pumilae,P.psychrotrophicum,P.wandoense,Phaeoisaria siamensis,Phaeopoacea asparagicola,Phaeosphaeria penniseti,Plectocarpon galapagoense,Porina sorediata,Pseudoberkleasmium chiangmaiense,Pyrenochaetopsis sinensis,Rhizophydium koreanum,Russula prasina,Sporoschisma chiangraiense,Stigmatomyces chamaemyiae,S.cocksii,S.papei,S.tschirnhausii,S.vikhrevii,Thysanorea uniseptata,Torula breviconidiophora,T.polyseptata,Trochilispora schefflerae and Vaginatispora palmae).Further,twelve new combinations(viz.Cryptoschizotrema cryptotrema,Prolixandromyces australi,P.elongatus,P.falcatus,P.longispinae,P.microveliae,P.neoalardi,P.polhemorum,P.protuberans,P.pseudoveliae,P.tenuistipitis and P.umbonatus),an epitype is chosen for Cantharellus goossensiae,a reference specimen for Acrogenospora sphaerocephala and new synonym Prolixandromyces are designated.Twenty-four new records on new hosts and new geographical distributions are also reported(i.e.Acrostalagmus annulatus,Cantharellus goossensiae,Coprinopsis villosa,Dothiorella plurivora,Dothiorella rhamni,Dothiorella symphoricarposicola,Dictyocheirospora rotunda,Fasciatispora arengae,Grammothele brasiliensis,Lasiodiplodia iraniensis,Lembosia xyliae,Morenoina palmicola,Murispora cicognanii,Neodidymelliopsis farokhinejadii,Neolinocarpon rachidis,Nothophoma quercina,Peroneutypa scoparia,Pestalotiopsis aggestorum,Pilidium concavum,Plagiostoma salicellum,Protofenestella ulmi,Sarocladium kiliense,Tetraploa nagasakiensis and Vaginatispora armatispora).
基金We are grateful to the Directors and Curators of the following herbaria for the loan of specimens in their keeping:BAFC,BPI,IMI,K(M),LPS,PREM,S and ZT.The Mushroom Research Foundation,Bandoo District,Chiang Rai Province,Thailand is acknowledged for providing postgraduate scholarship support and facilities to JK Liu.Appreciation is extended to the Thailand Research Fund BRG528002 for supporting this work.
文摘The type specimens of Auerswaldia,Auerswaldiella,Barriopsis,Botryosphaeria,Leptoguignardia,Melanops,Neodeightonia,Phaeobotryon,Phaeobotryosphaeria,Phyllachorella,Pyrenostigme,Saccharata,Sivanesania,Spencermartinsia and Vestergrenia were examined and fresh specimens of Botryosphaeriales were collected from Thailand.This material is used to provide a systematic treatment of Botryosphaeriales based on morphology and phylogeny.Two new genera,Botryobambusa and Cophinforma are introduced and comparedwith existing genera.Four species newto science,Auerswaldia dothiorella,A.lignicola,Botryosphaeria fusispora and Phaeobotryosphaeria eucalypti,are also described and justified.We accept 29 genera in Botryosphaeriales,with Macrovalsaria being newly placed.In the phylogenetic tree,the 114 strains of Botyrosphaeriales included in the analysis cluster into two major clades with 80%,96%and 1.00(MP,ML and BY)support,with Clade A containing the family type of Botryosphaeriaceae,and Clade B containing Phyllosticta,Saccharata and Melanops species.This group may represent Phyllostictaceae.In Clade A the taxa analyzed cluster in eight sub-clades(Clades A1-8).Clade A1 comprises three distinct subclusters corresponding to the genera Diplodia(Diplodia Clade),Neodeightonia(Neodeightonia Clade)and Lasiodiplodia(Lasiodiplodia Clade).Clade A2 clusters into three groups representing Phaeobotryosphaeria(100%),Phaeobotryon(100%)and Barriopsis(94%).Clade A3 incorporates 17 strains that cluster into three well-supported genera(Dothiorella(86%),Spencermartinsia(100%)and Auerswaldia(63%);the position of Macrophomina is not stable.Clade A4 is a single lineage(100%)representing the new genus Botryobambusa.Clade A5 is a wellsupported subclade incorporating Neofussicoccum.Clade A6 represents the type species of Botryosphaeria,three other Botryosphaeria species and two other genera,Neoscytalidium and Cophinforma gen.nov.Clade A7 comprises two Pseudofusicoccum species and Clade A8 has two Aplosporella species.These sub-clades may eventually require separate families but this requires analysis of a much larger dataset.Our data advances the understanding of Botryosphaeriales,there is,however,still much research to be carried out with resolution of families and genera,linkage of sexual and asexual morphs and differentiation of cryptic species.
基金the National Natural Science Foundation of China(No.30770013,No.31500013,No.31000013,No.31360014,No.31470152)the Special Program of Basic Science of the Ministry of Science and Technology(No.2012FY111600)the Technology of and International Cooperation Program of the Ministry of Science and Technology(No.2009DFA31160)of the People’s Republic of China,and the opening funding of State key Laboratory of Mycology,Institute of Microbiology,Chinese Academy of Sciences for funding。
文摘Notes on 113 fungal taxa are compiled in this paper,including 11 new genera,89 new species,one new subspecies,three new combinations and seven reference specimens.Awide geographic and taxonomic range of fungal taxa are detailed.In the Ascomycota the new genera Angustospora(Testudinaceae),Camporesia(Xylariaceae),Clematidis,Crassiparies(Pleosporales genera incertae sedis),Farasanispora,Longiostiolum(Pleosporales genera incertae sedis),Multilocularia(Parabambusicolaceae),Neophaeocryptopus(Dothideaceae),Parameliola(Pleosporales genera incertae sedis),and Towyspora(Lentitheciaceae)are introduced.Newly introduced species are Angustospora nilensis,Aniptodera aquibella,Annulohypoxylon albidiscum,Astrocystis thailandica,Camporesia sambuci,Clematidis italica,Colletotrichum menispermi,C.quinquefoliae,Comoclathris pimpinellae,Crassiparies quadrisporus,Cytospora salicicola,Diatrype thailandica,Dothiorella rhamni,Durotheca macrostroma,Farasanispora avicenniae,Halorosellinia rhizophorae,Humicola koreana,Hypoxylon lilloi,Kirschsteiniothelia tectonae,Lindgomyces okinawaensis,Longiostiolum tectonae,Lophiostoma pseudoarmatisporum,Moelleriella phukhiaoensis,M.pongdueatensis,Mucoharknessia anthoxanthi,Multilocularia bambusae,Multiseptospora thysanolaenae,Neophaeocryptopus cytisi,Ocellularia arachchigei,O.ratnapurensis,Ochronectria thailandica,Ophiocordyceps karstii,Parameliola acaciae,P.dimocarpi,Parastagonospora cumpignensis,Pseudodidymosphaeria phlei,Polyplosphaeria thailandica,Pseudolachnella brevifusiformis,Psiloglonium macrosporum,Rhabdodiscus albodenticulatus,Rosellinia chiangmaiensis,Saccothecium rubi,Seimatosporium pseudocornii,S.pseudorosae,Sigarispora ononidis and Towyspora aestuari.New combinations are provided for Eutiarosporella dactylidis(sexual morph described and illus trated)and Pseudocamarosporium pini.Descriptions,illustrations and/or reference specimens are designated for Aposphaeria corallinolutea,Cryptovalsa ampelina,Dothiorella vidmadera,Ophiocordyceps formosana,Petrakia echinata,Phragmoporthe conformis and Pseudocamarosporium pini.The new species of Basidiomycota are Agaricus coccyginus,A.luteofibrillosus,Amanita atrobrunnea,A.digitosa,A.gleocystidiosa,A.pyriformis,A.strobilipes,Bondarzewia tibetica,Cortinarius albosericeus,C.badioflavidus,C.dentigratus,C.duboisensis,C.fragrantissimus,C.roseobasilis,C.vinaceobrunneus,C.vinaceogrisescens,C.wahkiacus,Cyanoboletus hymenoglutinosus,Fomitiporia atlantica,F.subtilissima,Ganoderma wuzhishanensis,Inonotus shoreicola,Lactifluus armeniacus,L.ramipilosus,Leccinum indoaurantiacum,Musumecia alpina,M.sardoa,Russula amethystina subp.tengii and R.wangii are introduced.Descriptions,illustrations,notes and/or reference specimens are designated for Clarkeinda trachodes,Dentocorticium ussuricum,Galzinia longibasidia,Lentinus stuppeus and Leptocorticium tenellum.The other new genera,species new combinations are Anaeromyces robustus,Neocallimastix californiae and Piromyces finnis from Neocallimastigomycota,Phytophthora estuarina,P.rhizophorae,Salispina,S.intermedia,S.lobata and S.spinosa from Oomycota,and Absidia stercoraria,Gongronella orasabula,Mortierella calciphila,Mucor caatinguensis,M.koreanus,M.merdicola and Rhizopus koreanus in Zygomycota.
基金K.D.Hyde would like to thank the Thailand Research Fund grant no RSA5980068 entitled Biodiversity,phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans and the Chinese Academy of Sciences,Project Number 2013T2S0030,for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany.Financial support by the German Academic Exchange Service(DAAD)and the Thai Royal Golden Ph.D.Jubilee-Industry program(RGJ)for a joint TRF-DAAD PPP(2012-2014)academic exchange grant to K.D.Hyde and M.Stadler,and the RGJ for a personal grant to B.Thongbai(No.Ph.D/0138/2553 in 4.S.MF/53/A.3)is gratefully acknowledged.Chayanard Phukhamsakda(PHD/0020/2557)acknowledges the The Royal Golden Jubilee Ph.D.Program under the Thailand Research Fund.Mingkwan Doilom acknowledges the Royal Golden Jubilee Ph.D.Program(PHD./0072/2553 in 4.S.M.F./53/A.2)under the Thailand Research Fund.Ausana Mapook is grateful to Research and Researchers for Industries(RRI)PHD57I0012.Rungtiwa Phookamsak sincerely appreciates The Royal Golden Jubilee Ph.D.Program(PHD/0090/2551 in 4.S.MF/51/A.1)under the Thailand Research Fund for financial support.Qi Zhao thanks the National Natural Science Foundation of China(No.31360015)the CAS/SAFEA International Partnership Program for Creative Research Teams,and the Knowledge Innovation Program of the Chinese Academy of Sciences(No.KSCX2-EW-Z-9 and KIB2016002)+11 种基金KNAR acknowledges support from the University Grants Commission(UGC),India,in the form of a Rajiv Gandhi National Fellowship(Grant No.F.14-2(SC)/2009(SA-III)(and the permissions given to him for collecting agaric specimens from the forests of Kerala by the Principal Chief Conservator of Forests,Government of Kerala(WL12-4042/2009 dated 05-08-2009)This Project was funded by the National Plan for Science,Technology and Innovation(MAARIFAH),King Abdulaziz City for Science and Technology,Kingdom of Saudi Arabia,Award Number(12-BIO2840-02)B.K.Cui thanked for the finance by the Fundamental Research Funds for the Central Universities(No.2016ZCQ04)and the National Natural Science Foundation of China(Project No.31422001)We would like to thank Dr.Marcela E.S.Cáceres for translating the German description of Clavulinopsis,the Conselho Nacional de Desenvolvimento Cientí-fico(CNPq)for the master scholarship of LSAN,the PósGraduac¸ǎo em Biologia de Fungos(UFPE,Brazil),CNPq(Protax 562106/2010-3,Sisbiota 563342/2010-2,Universal 472792/2011-3)FACEPE(APQ-0788-2.03/12)for financing this research.H.B.Lee was supported by the Graduate Program for the Undiscovered Taxa of Korea,and by the Project on Survey and Discovery of Indigenous Fungal Species of Korea,funded by NIBR and NNIBR of the Ministry of Environment(MOE),and in part by a fund from National Institute of Animal Science under Rural Development Administration,Republic of Korea.Aniket Ghosh,Priyanka Uniyal and R.P.Bhatt are grateful to the Head,Department of Botany&Microbiology,HNB Garhwal University,Srinagar Garhwal for providing all kinds of facilities during the present study.Kanad Das and Abhishek Baghela are thankful to the Director,Botanical Survey of India,Kolkata and Director,MACS’Agharkar Research Institute,Pune respectively for providing facilities.UGC provided fellowship to Aniket Ghosh and Priyanka Unial.Field assistance rendered by Mr.Tahir Mehmood and Mr.Upendra Singh(HNBGU)are also duly acknowledged.Tuula Niskanen,Kare Liimatainen,Ilkka Kytövuori,Joe Ammirati,Ba´lint Dima,and Dimitar Bojantchev would like to acknowledge Heino Vänskäfor the help with nomenclature.We are grateful to the curators of H and S.This work was partially supported by the Ministry of Environment,Finland(YM38/5512/2009)and OskarÖflunds Stiftelse.The authors thanks Dr.Kerstin Voigt for the inestimable help in critical reviewing the lower fungi entries,the Coordenac¸ǎo de Aperfeic¸oamento de Pessoal de Nı´vel Superior(CAPES)and Fundac¸ǎo de AmparoàCiência e Tecnologia do Estado de Pernambuco(FACEPE)for the postgraduate scholarships to Diogo X.Lima and Carlos A.F.de Souza,respectively.We also thank Conselho Nacional de Desenvolvimento Científico e Tecnológico(CNPq)and FACEPE for financial support through the projects:‘Mucoromycotina in upland forests from the semi-arid of Pernambuco’(CNPq-458391/2014-0),and‘Diversity of Mucoromycotina in different ecosystems of the Pernambuco’s Atlantic Rainforest’(FACEPE-APQ 0842-2.12/14).Z.L Luo and H.Y Su would like to thank the National Natural Science Foundation of China(Project ID:31460015)for financial support on Study of the distribution pattern and driving factors of aquatic fungal diversity in the region of Three Parallel Rivers.C.Phukhamsakda would like to thank Dr.Matthew P.Nelsen for his valuable suggestions.Saranyaphat Boonmee thanks to the Thailand Research Fund,project number TRG5880152 and Mae Fah Luang University for a Grant Number 2559A30702006C.G.Lin and Y.Wang thank for the finance by the National Natural Science Foundation of China(No.NSFC 31560489)Fundamental Research on Science and Technology,Ministry of Science and Technology of China(2014FY120100)Haixia Wu would like to thank Dr.Shaun Pennycook for his kindly nomenclatural review and thanked for the finance by the National Natural Science Foundation of China(Project No.31300019)S.C.Karunarathna,P.E.Mortimer and J.C.Xu would like to thank the World Agroforestry Centre,East and Central Asia OfficeKey Laboratory for Plant Diversity and Biogeography of East Asia,Kunming Institute of Botany,Chinese Academy of Sciencethe ChineseMinistry of Science and Technology,under the 12th 5-year National Key Technology Support Program(NKTSP)2013 BAB07B06 integration and comprehensive demonstration of key technologies on Green Phosphate-mountaion Construction and the CGIAR Research Program 6:Forest,Trees and Agroforestry for partial funding.The National Research Council of Thailand(NRCT),projects-Taxonomy,phylogeny and cultivation of Lentinus species in northern Thailand(NRCT/55201020007)is also thanked.K.Tanaka and A.Hashimoto would like to thank the Japan Society for the Promotion of Science(JSPS,26291084,16K07474,16J07243).
文摘This is a continuity of a series of taxonomic papers where materials are examined,described and novel combinations are proposed where necessary to improve our traditional species concepts and provide updates on their classification.In addition to extensive morphological descriptions and appropriate asexual and sexual connections,DNA sequence data are also analysed from concatenated datasets(rDNA,TEF-a,RBP2 and b-Tubulin)to infer phylogenetic relationships and substantiate systematic position of taxa within appropriate ranks.Wherever new species or combinations are being proposed,we apply an integrative approach(morphological and molecular data as well as ecological features wherever applicable).Notes on 125 fungal taxa are compiled in this paper,including eight new genera,101 new species,two new combinations,one neotype,four reference specimens,new host or distribution records for eight species and one alternative morphs.The new genera introduced in this paper are Alloarthopyrenia,Arundellina,Camarosporioides,Neomassaria,Neomassarina,Neotruncatella,Paracapsulospora and Pseudophaeosphaeria.The new species are Alfaria spartii,Alloarthopyrenia italica,Anthostomella ravenna,An.thailandica,Arthrinium paraphaeospermum,Arundellina typhae,Aspergillus koreanus,Asterina cynometrae,Bertiella ellipsoidea,Blastophorum aquaticum,Cainia globosa,Camarosporioides phragmitis,Ceramothyrium menglunense,Chaetosphaeronema achilleae,Chlamydotubeufia helicospora,Ciliochorella phanericola,Clavulinopsis aurantiaca,Colletotrichum insertae,Comoclathris italica,Coronophora myricoides,Cortinarius fulvescentoideus,Co.nymphatus,Co.pseudobulliardioides,Co.tenuifulvescens,Cunninghamella gigacellularis,Cyathus pyristriatus,Cytospora cotini,Dematiopleospora alliariae,De.cirsii,Diaporthe aseana,Di.garethjonesii,Distoseptispora multiseptata,Dis.tectonae,Dis.tectonigena,Dothiora buxi,Emericellopsis persica,Gloniopsis calami,Helicoma guttulatum,Helvella floriforma,H.oblongispora,Hermatomyces subiculosa,Juncaceicola italica,Lactarius dirkii,Lentithecium unicellulare,Le.voraginesporum,Leptosphaeria cirsii,Leptosphaeria irregularis,Leptospora galii,Le.thailandica,Lindgomyces pseudomadisonensis,Lophiotrema bambusae,Lo.fallopiae,Meliola citri-maximae,Minimelanolocus submersus,Montagnula cirsii,Mortierella fluviae,Muriphaeosphaeria ambrosiae,Neodidymelliopsis ranunculi,Neomassaria fabacearum,Neomassarina thailandica,Neomicrosphaeropsis cytisi,Neo.cytisinus,Neo.minima,Neopestalotiopsis cocoe¨s,Neopestalotiopsis musae,Neoroussoella lenispora,Neotorula submersa,Neotruncatella endophytica,Nodulosphaeria italica,Occultibambusa aquatica,Oc.chiangraiensis,Ophiocordyceps hemisphaerica,Op.lacrimoidis,Paracapsulospora metroxyli,Pestalotiopsis sequoiae,Peziza fruticosa,Pleurotrema thailandica,Poaceicola arundinis,Polyporus mangshanensis,Pseudocoleophoma typhicola,Pseudodictyosporium thailandica,Pseudophaeosphaeria rubi,Purpureocillium sodanum,Ramariopsis atlantica,Rhodocybe griseoaurantia,Rh.indica,Rh.luteobrunnea,Russula indoalba,Ru.pseudoamoenicolor,Sporidesmium aquaticivaginatum,Sp.olivaceoconidium,Sp.pyriformatum,Stagonospora forlicesenensis,Stagonosporopsis centaureae,Terriera thailandica,Tremateia arundicola,Tr.guiyangensis,Trichomerium bambusae,Tubeufia hyalospora,Tu.roseohelicospora and Wojnowicia italica.New combinations are given for Hermatomyces mirum and Pallidocercospora thailandica.A neotype is proposed for Cortinarius fulvescens.Reference specimens are given for Aquaphila albicans,Leptospora rubella,Platychora ulmi and Meliola pseudosasae,while new host or distribution records are provided for Diaporthe eres,Di.siamensis,Di.foeniculina,Dothiorella iranica,Do.sarmentorum,Do.vidmadera,Helvella tinta and Vaginatispora fuckelii,with full taxonomic details.An asexual state is also reported for the first time in Neoacanthostigma septoconstrictum.This paper contributes to a more comprehensive update and improved identification of many ascomycetes and basiodiomycetes.
基金National Research Council of Thailand(Mae Fah Luang University)for the grant"Biodiversity,phylogeny and role of fungal endophytes of Pandanaceae"(Grant No.592010200112)Thailand Research Fund(TRF)grant no RSA5980068 entitled"Biodiversity,phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans",the National Research Council of Thailand(Mae Fah Luang University)Grant No.60201000201 entitled"Diseases of mangrove trees and maintenance of good forestry practice"+1 种基金the Chinese Academy of Sciences,project number 2013T2S0030,for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany.Samantha C.Karunarathna thanks CAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(number 2018PC0006)the National Science Foundation of China(NSFC)for funding this work under the project code 31750110478。
文摘Demarcation of family,genus and species boundaries in the Diaporthales has been tentative due to uninformative illus-trations and descriptions,overlapping morphological characteristics,misplacement or poor condition of type specimens and shortage of molecular data from ex-type cultures.In this study,we obtained the type specimens or other authentic specimens of diaporthalean taxa from worldwide fungaria.We examined,described and illustrated them.This study is based on morphological characters from type or authentic specimens,details from protologue and original illustrations and molecular data obtained from GenBank.Combined analyses of nrITS,nrLSU,RPB2 and TEF1-a sequence data were used to construct the molecular phylogeny.Additionally,we provided separate phylogenetic trees for families when necessary to show the generic distribution within these families based on suitable gene markers.Based on morphology and phylogeny,we treat 17 genera previously assigned to Diaporthales genera incertae sedis within several families.For some genera we have designated new generic types as they are lacking type species or type species have affiliations with other families.We exclude Anisomycopsis from Diaporthales and place it in Xylariomycetidae genera incertae sedis.Tirisporellaceae,which was previously placed in Tirisporellales is placed in Diaporthales based on phylogeny and morphology.A new combi-nation,Dendrostoma leiphaemia propose for Amphiporthe leiphaemia(Fr.)Butin.Based on the morphological characters and molecular data we accept 27 families and 138 genera within Diaporthales,24 genera in Diaporthales genera incertae sedis and one genus in Xylariomycetidae genera incertae sedis.We provide notes for genera in Diaporthales genera incertae sedis,and excluded and doubtful genera are listed with notes on their taxonomy and phylogeny.
基金National Natural Science Foundation of China for supporting the project Biodiversity,Taxonomy,Phylogeny,Evolution and Phytogeography of phytopathogens in Dothideomycetes from Southern China(Grant No.31950410548)for funding this research.Ning Xie would like to thank Project of DEGP(2019KTSCX150)+29 种基金.Kevin D Hyde thanks the Thailand Research Fund for the grant RDG6130001 entitled“Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion”.Rungtiwa Phookamsak thanks CAS President’s International Fellowship Initiative(PIFI)for young staff(Grant No.Y9215811Q1)the Yunnan Provincial Department of Human Resources and Social Security(Grant No.Y836181261)National Science Foundation of China(NSFC)project code 31850410489(Grant No.Y81I982211)for financial supportDhanushka Wanasinghe would like to thank CAS President’s International Fellowship Initiative(PIFI)for funding his postdoctoral research(number 2019PC0008)the 64th batch of China Postdoctoral Science Foundation(Grant No.Y913083271).Vemuri V.Sarma would like to thank SERB,Department of Science and Technology,Government of India,for funding a project(SERB/SB/SO/PS/18/2014 dt.19.5.2015)Ministry of Earth Sciences(MOES),Govt.of India for funding a project(Sanction order:MOES/36/OO1S/Extra/40/2014/PC-IV dt.14.01.2015)the Department of Biotechnology,Pondicherry University for facilitiesthe National Research Council of Thailand(projects no.61215320013 and No.61215320023)the Thailand Research Fund(project no.TRG6180001)Plant Genetic Conservation Project under the Royal Initiation of Her Royal High-ness Princess Maha Chakri Sirindhorn-Mae Fah Luang University.Alan JL Phillips acknowledges the support from UIDB/04046/2020 and UIDP/04046/2020 Centre grants from FCT,Portugal(to Bio-ISI).Saowaluck Tibpromma would like to thank the International Postdoctoral Exchange Fellowship Program(number Y9180822S1)CAS President’s International Fellowship Initiative(PIFI)(number 2020PC0009)the National Natural Science Foundation of China(Project Nos.31800010 and 31750001)for financial support.the National Natural Science Foundation of China(No.NSFC 31950410558)Guizhou Medical University(grant number FAMP201906K)tthe National Nat-ural Science Foundation of China(No.NSFC 31760013)the Scientific Research Foundation of Yunnan Provincial Department of Education(2017ZZX186)the Thousand Talents Plan,Youth Project of Yun-nan Provinces for finance supportthe 5th batch of Postdoctoral Orientation Training Personnel in Yunnan Province(Grant No.Y934283261)the 64th batch of China Postdoctoral Science Foundation(Grant No.Y913082271)M Niranjan thanks SERB,Govt.of India for a fellow-ship.Huang Zhang would like to thank Natural Science Foundation of China(NSF 31500017).Jadson DP Bezerra thanks the Conselho Nacional de Desenvolvimento Científico e Tecnológico(CNPq),the Coordenação de Aperfeiçoamento de Pessoal de Nível Superior(CAPES,Finance Code 001)the Fundação de AmparoàCiência e Tecnologia de Pernambuco(FACEPE)for fellowship.B.Devadatha thanks MOES,Govt.of India for a fellowship.Hai-Xia Wu would like to the Fundamental Research Funds for the Central Non-profit Research Institution of CAF(Grant No.CAFYBB2019QB005)the Ten Thousand Talents Plan,Youth Top Project of Yunnan Provinces for finance support.Ausana Mapook thanks to Research and Research-ers for Industries(RRI)under Thailand Research Fund for a personal grant(PHD57I0012)Putarak Chomnunti would like to thank Mae Fah Luang University(Grant No.DR256201012003)Diversity-Based Economy Development Office and National Research Council of Thailand Research(Grant No.T2561022)for the financial support.Satinee Suetrong thanks the collaborative project between BIOTEC and Department of Marine and Coastal Resources(DMCR),Ministry of Natural Resources and Environmentunder a project:Marine Microbes for National Reserves:Alternative Ways of State Property.N.Chai-wan would like to thank the Thailand Research Fund(PHD60K0147).
文摘Numerous new taxa and classifications of Dothideomycetes have been published following the last monograph of families of Dothideomycetes in 2013.A recent publication by Honsanan et al.in 2020 expanded information of families in Dothideo-mycetidae and Pleosporomycetidae with modern classifications.In this paper,we provide a refined updated document on orders and families incertae sedis of Dothideomycetes.Each family is provided with an updated description,notes,including figures to represent the morphology,a list of accepted genera,and economic and ecological significances.We also provide phylogenetic trees for each order.In this study,31 orders which consist 50 families are assigned as orders incertae sedis in Dothideomycetes,and 41 families are treated as families incertae sedis due to lack of molecular or morphological evidence.The new order,Catinellales,and four new families,Catinellaceae,Morenoinaceae Neobuelliellaceae and Thyrinulaceae are introduced.Seven genera(Neobuelliella,Pseudomicrothyrium,Flagellostrigula,Swinscowia,Macroconstrictolumina,Pseudobogoriella,and Schummia)are introduced.Seven new species(Acrospermum urticae,Bogoriella complexoluminata,Dothiorella ostryae,Dyfrolomyces distoseptatus,Macroconstrictolumina megalateralis,Patellaria microspora,and Pseu-domicrothyrium thailandicum)are introduced base on morphology and phylogeny,together with two new records/reports and five new collections from different families.Ninety new combinations are also provided in this paper.
基金Saowaluck Tibpromma would like to thank the Molecular Biology Experimental Center at Kunming Institute of Botany for facilities for molecular work,the Mushroom Research Foundation(MRF)Chiang Rai,Thailand for the financial support of her study and Shaun Pennycook is thanked for nomenclatural advice.K.D.Hyde would like to thank the Thailand Research Fund Grant No.RSA5980068 entitled“Biodiversity,phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans”+21 种基金the Chinese Academy of Sciences,Project Number 2013T2S0030for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany and National Research Council of Thailand(Mae Fah Luang University)for a grants“Biodiversity,phylogeny and role of fungal endophytes of Pandanaceae”(Grant No.:592010200112)“Diseases of mangrove trees and maintenance of good forestry practice”(Grant No.:60201000201)for supporting this study.S.C.Karunarathna,P.E.Mortimer and J.C.Xu would like to thank the World Agroforestry Centre,East and Central Asia OfficeKey Laboratory for Plant Diversity and Biogeography of East Asia,Kunming Institute of Botany,Chinese Academy of Sciencethe ChineseMinistry of Science and Technology,under the 12th 5-year National Key Technology Support Program(NKTSP)2013 BAB07B06 integration and comprehensive demonstration of key technologies on Green Phosphate-mountaion Construction and the CGIAR Research Program 6:Forest,Trees and Agroforestry for partial funding.The authors would like to extend their sincere appreciation to the Deanship of Scientific Research at King Saud University for funding this research group NO(RG-1436-025)Financial support by the German Academic Exchange Service(DAAD)and the Thai Royal Golden Ph.D.Jubilee-Industry program(RGJ)for a joint TRFDAAD PPP(2012-2014)academic exchange grant to K.D.Hyde and M.Stadler,and the RGJ for a personal grant to B.Thongbai(No.Ph.D/0138/2553 in 4.S.MF/53/A.3)is gratefully acknowledged.Chayanard Phukhamsakda(PHD/0020/2557)acknowledges the Royal Golden Jubilee Ph.D.Program under the Thailand Research Fund.Mingkwan Doilom acknowledges the Royal Golden Jubilee Ph.D.Program(PHD./0072/2553 in 4.S.M.F./53/A.2)under the Thailand Research Fund.Ausana Mapook is grateful to Research and Researchers for Industries(RRI)PHD57I0012.Rungtiwa Phookamsak expresses sincere appreciation to The CAS President’s International Fellowship for Postdoctoral Researchers(Project No.2017PB0072)Qi Zhao thanks the National Natural Science Foundation of China(No.31360015)the CAS/SAFEA International Partnership Program for Creative Research Teams,and the Knowledge Innovation Program of the Chinese Academy of Sciences(No.KSCX2-EW-Z-9 and KIB2016002).Andre´Luiz Cabral Monteiro de Azevedo Santiago,Carlos Alberto Fragoso de Souza,Diogo Xavier Lima,Rafael Jose´Vilela de Oliveira and Gladstone Alves da Silva would like to thank the Coordenac¸a˜o de Aperfeic¸oamento de Pessoal de Nı´vel Superior(Coordination for the Improvement of Higher Education Personnel)(CAPES)and the Fundac¸a˜o de Amparo a`Cieˆncia e Tecnologia do Estado de Pernambuco(Foundation for the support of Science and Technology of the state of Pernambuco)(FACEPE)for the postgraduate scholarships awarded to Diogo X.Lima and Carlos A.F.de Souza,respectively.We would also like to thank the Conselho Nacional de Desenvolvimento Cientı´fico e Tecnolo´gico(National Council for Scientific and Technological Development)(CNPq)and FACEPE for financial support through the projects:‘Mucoromycotina in upland forests in the semi-arid region of Pernambuco’(CNPq-458391/2014-0)‘Diversity of Mucoromycotina in different ecosystems of the Pernambuco Atlantic Rainforest’(FACEPE-APQ 0842-2.12/14).H.B.Lee was supported by the Graduate Program for the Undiscovered Taxa of Korea,and by the Project on Survey and Discovery of Indigenous Fungal Species of Korea funded by NIBR and Project on Discovery of Fungi from Freshwater and Collection of Fungarium funded by NNIBR of the Ministry of Environment(MOE)and in part by a fund from National Institute of Animal Science under Rural Development Administration,Republic of Korea.Z.L Luo and H.Y Su would like to thank the National Natural Science Foundation of China(Project ID:31460015)for financial support on Study of the distribution pattern and driving factors of aquatic fungal diversity in the region of Three Parallel Rivers.Saranyaphat Boonmee thanks the National Research Council of Thailand,project number 2560A30702021the Thailand Research Fund,project number TRG5880152 for providing financial support.C.G.Lin and Y.Wang thank the grant from the National Natural Science Foundation of China(No.NSFC 31560489)Fundamental Research on Science and Technology,Ministry of Science and Technology of China(2014FY120100)Mr.Jingzu Sun thank for the National Natural Science Foundations of China(No.31600024)Wei Dong thanks the for National Natural Science Foundation of China(Project ID:NSF 31500017 to Huang Zhang)P.N.Singh,A.Baghela,S.K.Singh,and S.Aamir thank the Director,MACS’Agharkar Research Institute,Pune,India for providing facilities and Rajendra Singh(Department of Zoology,DDU Gorakhpur University,UP,India)for identification of insect-host.Saisamorn Lumyong and Rene K.Schumacher are thanked for valuable suggestions and collecting specimens.K.N.A.Raj acknowledges support from the University Grants Commission(UGC)India,in the form of a Rajiv Gandhi National Fellowship(Grant No.F.14-2(SC)/2009(SA-III))K.N.A.Raj also acknowledges the permissions given to him for collecting agaric specimens from the forests of Kerala by the Principal Chief Conservator of Forests,Government of Kerala(WL12-4042/2009 dated 5 August 2009).K.P.D.Latha acknowledges the financial support from the Kerala State Council for Science,Technology and Environment(KSCSTE)in the form of a PhD fellowship(Grant No.001/FSHP/2011/CSTE)K.P.D.Latha also acknowledges the permission(No.WL10-4937/2012,dated 3-10-2013)given to her by the Principal Chief Conservator of Forests,Government of Kerala,to collect agaric specimens from the forests of Kerala.Zdenko Tkalcec has been partially supported by Croatian Science Foundation under the project HRZZ-IP-11-2013-2202(ACCTA)is grateful to Milan Cerkez for his great contribution to the study of coprinoid and coprophilous fungi in Croatia.Vladimir Antonı´n thank the Moravian Museum by the Ministry of Culture of the Czech Republic as part of its long-term conceptual development programme for research institutions(DKRVO,ref.MK000094862)T.C.Wen,Y.P.Xiao,C.Norphanphoun and K.K.Hapuarachchi are grateful to the National Natural Science Foundation of China(No.31460012)and the Science and Technology Foundation of Guizhou Province(No.[2016]2863)Y.W.Lim would like to thanks NIBR supporting the Project on Survey and Discovery of Indigenous Fungal Species of Korea.Kanad Das and Dyutiparna Chakraborty are thankful to the Director,Botanical Survey of India(BSI)and Scientist-in-Charge,BSI,Gangtok for providing facilities during this study.Sinchan Adhikari,Joydeep Karmakar and Tapas Kumar Bandyopadhyay would like to acknowledge DST-PURSE and DST-FIST for providing central instrumentation facilities and Alan JL Phillips acknowledges the Biosystems and Integrative Sciences Institute(BioISI,FCT/UID/Multi/04046/2013).
文摘This is a continuity of a series of taxonomic and phylogenetic papers on the fungi where materials were collected from many countries,examined and described.In addition to extensive morphological descriptions and appropriate asexual and sexual connections,DNA sequence data are also analysed from concatenated datasets to infer phylogenetic relationships and substantiate systematic positions of taxa within appropriate ranks.Wherever new species or combinations are proposed,we apply an integrative approach using morphological and molecular data as well as ecological features wherever applicable.Notes on 112 fungal taxa are compiled in this paper including Biatriosporaceae and Roussoellaceae,Didysimulans gen.nov.,81 new species,18 new host records and new country records,five reference specimens,two new combinations,and three sexual and asexual morph reports.The new species are Amanita cornelii,A.emodotrygon,Angustimassarina alni,A.arezzoensis,A.italica,A.lonicerae,A.premilcurensis,Ascochyta italica,A.rosae,Austroboletus appendiculatus,Barriopsis thailandica,Berkleasmium ariense,Calophoma petasitis,Camarosporium laburnicola,C.moricola,C.grisea,C.ossea,C.paraincrustata,Colletotrichum sambucicola,Coprinopsis cerkezii,Cytospora gelida,Dacrymyces chiangraiensis,Didysimulans italica,D.mezzanensis,Entodesmium italica,Entoloma magnum,Evlachovaea indica,Exophiala italica,Favolus gracilisporus,Femsjonia monospora,Fomitopsis flabellata,F.roseoalba,Gongronella brasiliensis,Helvella crispoides,Hermatomyces chiangmaiensis,H.chromolaenae,Hysterium centramurum,Inflatispora caryotae,Inocybe brunneosquamulosa,I.luteobrunnea,I.rubrobrunnea,Keissleriella cirsii,Lepiota cylindrocystidia,L.flavocarpa,L.maerimensis,Lophiotrema guttulata,Marasmius luculentus,Morenoina calamicola,Moelleriella thanathonensis,Mucor stercorarius,Myrmecridium fluviae,Myrothecium septentrionale,Neosetophoma garethjonesii,Nigrograna cangshanensis,Nodulosphaeria guttulatum,N.multiseptata,N.sambuci,Panus subfasciatus,Paraleptosphaeria padi,Paraphaeosphaeria viciae,Parathyridaria robiniae,Penicillium punicae,Phaeosphaeria calamicola,Phaeosphaeriopsis yuccae,Pleurophoma italica,Polyporus brevibasidiosus,P.koreanus,P.orientivarius,P.parvovarius,P.subdictyopus,P.ulleungus,Pseudoasteromassaria spadicea,Rosellinia mearnsii,Rubroboletus demonensis,Russula yanheensis,Sigarispora muriformis,Sillia italica,Stagonosporopsis ailanthicola,Strobilomyces longistipitatus,Subplenodomus galicola and Wolfiporia pseudococos.The new combinations are Melanomma populina and Rubroboletus eastwoodiae.The reference specimens are Cookeina tricholoma,Gnomoniopsis sanguisorbae,Helvella costifera,Polythrincium trifolii and Russula virescens.The new host records and country records are Ascochyta medicaginicola,Boletellus emodensis,Cyptotrama asprata,Cytospora ceratosperma,Favolaschia auriscalpium,F.manipularis,Hysterobrevium mori,Lentinus sajor-caju,L.squarrosulus,L.velutinus,Leucocoprinus cretaceus,Lophiotrema vagabundum,Nothophoma quercina,Platystomum rosae,Pseudodidymosphaeria phlei,Tremella fuciformis,Truncatella spartii and Vaginatispora appendiculata and three sexual and asexual morphs are Aposphaeria corallinolutea, Dothiorabuxi and Hypocrella calendulina.
基金The research was supported by 1)Chinese Academy of Sciences(Project No.KSCX2-EW-Z-9).K.Tanaka would like to thank the Japan Society for the Promotion of Science(JSPS,25440199)for financial support.This project was supported by the Distinguished Scientist Fellowship Program(DSFP),King Saud University,Saudi Arabia.This project was also supported by NSTIP strategic technologies program,number(12-BIO2840-02)in the Kingdom of Saudi Arabia.B.Buyck and V.Hofstetter acknowledge the ATM“Emergences”(Dirs.P.Janvier&S.Peigné)from the National museum of natural history,Paris,for financial support related to sequencing as well as travel expenses in Madagascar.Overseas travel of B.Buyck was funded by the ATM research program“Etat et structure phylogénétique de la biodiversitéactuelle et fossile”of the Paris’Museum.(director Ph.Janvier)S.Adamčík acknowledges funding by his national Slovak Project VEGA 02/0075/14.B.D.Shenoy acknowledges funding to visit Mae Fah Luang University,Chiang Rai under Indo-Thailand bilateral programme(THAI-1205).The Lewis family is warmly thanked for their generous hospitality,offering excellent and very agreeable working and field condition.K.Wisitrassameewong and A.Verbeken were financially supported by the joint doctorate program of the“Bijzonder Onderzoeksfonds Gent University”(BOF),Gent University.This research was also financial supported by The Biodiversity and Training Program(BRT R 149009)and Interaction Laboratory(BMIT),National Center for Genetic Engineering and Biotechnology(BIOTEC)Khlong Luang,Pathum Thani 12120,Thailand.Thanks are extended to the Thailand Research Fund grant(BRG 5580009)under the research grant entitled“Taxonomy,Phylogeny and Biochemistry of Thai Basidiomycetes”for financial support.J.Chen and R.L.Zhao would like to thank the National Natural Science Foundation of China(Project ID:31000013,31360014 and 31470152).Uwe Braun,Walter Jaklitsch,Tom May,Marc Stadler and Jo Taylor,are thanks for commenting on some parts of the manuscript.Shaun Pennycook is thanked for checking and suggesting corrections to most of the Latin names.
文摘This paper is a compilation of notes on 110 fungal taxa,including one new family,10 new genera,and 76 new species,representing a wide taxonomic and geographic range.The new family,Paradictyoarthriniaceae is introduced based on its distinct lineage in Dothideomycetes and its unique morphology.The family is sister to Biatriosporaceae and Roussoellaceae.The new genera are Allophaeosphaeria(Phaeosphaeriaceae),Amphibambusa(Amphisphaeriaceae),Brunneomycosphaerella(Capnodiales genera incertae cedis),Chaetocapnodium(Capnodiaceae),Flammeascoma(Anteagloniaceae),Multiseptospora(Pleosporales genera incertae cedis),Neogaeumannomyces(Magnaporthaceae),Palmiascoma(Bambusicolaceae),Paralecia(Squamarinaceae)and Sarimanas(Melanommataceae).The newly described species are the Ascomycota Aliquandostipite manochii,Allophaeosphaeria dactylidis,A.muriformia,Alternaria cesenica,Amphibambusa bambusicola,Amphisphaeria sorbi,Annulohypoxylon thailandicum,Atrotorquata spartii,Brunneomycosphaerella laburni,Byssosphaeria musae,Camarosporium aborescentis,C.aureum,C.frutexensis,Chaetocapnodium siamensis,Chaetothyrium agathis,Colletotrichum sedi,Conicomyces pseudotransvaalensis,Cytospora berberidis,C.sibiraeae,Diaporthe thunbergiicola,Diatrype palmicola,Dictyosporium aquaticum,D.meiosporum,D.thailandicum,Didymella cirsii,Dinemasporium nelloi,Flammeascoma bambusae,Kalmusia italica,K.spartii,Keissleriella sparticola,Lauriomyces synnematicus,Leptosphaeria ebuli,Lophiostoma pseudodictyosporium,L.ravennicum,Lophiotrema eburnoides,Montagnula graminicola,Multiseptospora thailandica,Myrothecium macrosporum,Natantispora unipolaris,Neogaeumannomyces bambusicola,Neosetophoma clematidis,N.italica,Oxydothis atypica,Palmiascoma gregariascomum,Paraconiothyrium nelloi,P.thysanolaenae,Paradictyoarthrinium tectonicola,Paralecia pratorum,Paraphaeosphaeria spartii,Pestalotiopsis digitalis,P.dracontomelon,P.italiana,Phaeoisaria pseudoclematidis,Phragmocapnias philippinensis,Pseudocamarosporium cotinae,Pseudocercospora tamarindi,Pseudotrichia rubriostiolata,P.thailandica,Psiloglonium multiseptatum,Saagaromyces mangrovei,Sarimanas pseudofluviatile,S.shirakamiense,Tothia spartii,Trichomerium siamensis,Wojnowicia dactylidicola,W.dactylidis and W.lonicerae.The Basidiomycota Agaricus flavicentrus,A.hanthanaensis,A.parvibicolor,A.sodalis,Cantharellus luteostipitatus,Lactarius atrobrunneus,L.politus,Phylloporia dependens and Russula cortinarioides are also introduced.Epitypifications or reference specimens are designated for Hapalocystis berkeleyi,Meliola tamarindi,Pallidocercospora acaciigena,Phaeosphaeria musae,Plenodomus agnitus,Psiloglonium colihuae,P.sasicola and Zasmidium musae while notes and/or new sequence data are provided for Annulohypoxylon leptascum,A.nitens,A.stygium,Biscogniauxia marginata,Fasciatispora nypae,Hypoxylon fendleri,H.monticulosum,Leptosphaeria doliolum,Microsphaeropsis olivacea,Neomicrothyrium,Paraleptosphaeria nitschkei,Phoma medicaginis and Saccotheciaceae.A full description of each species is provided with light micrographs(or drawings).Molecular data is provided for 90 taxa and used to generate phylogenetic trees to establish a natural classification for species.
基金the Chinese Academy of Sciences,project number 2013T2S0030,for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botanya research grant from the Biodiversity Research and Training Program(BRT R253012)+2 种基金The Thailand Research Fund(BRG 5280002)The International Scientific Cooperated Project of Guizhou Province(No[2013]7004)funding from the Spanish Ministerio de Ciencia e Innovación project CGL2011-25003.
文摘Article 59.1,of the International Code of Nomenclature for Algae,Fungi,and Plants(ICN;Melbourne Code),which addresses the nomenclature of pleomorphic fungi,became effective from 30 July 2011.Since that date,each fungal species can have one nomenclaturally correct name in a particular classification.All other previously used names for this species will be considered as synonyms.The older generic epithet takes priority over the younger name.Any widely used younger names proposed for use,must comply with Art.57.2 and their usage should be approved by the Nomenclature Committee for Fungi(NCF).In this paper,we list all genera currently accepted by us in Dothideomycetes(belonging to 23 orders and 110 families),including pleomorphic and nonpleomorphic genera.In the case of pleomorphic genera,we follow the rulings of the current ICN and propose single generic names for future usage.The taxonomic placements of 1261 genera are listed as an outline.Protected names and suppressed names for 34 pleomorphic genera are listed separately.Notes and justifications are provided for possible proposed names after the list of genera.Notes are also provided on recent advances in our understanding of asexual and sexual morph linkages in Dothideomycetes.A phylogenetic tree based on four gene analyses supported 23 orders and 75 families,while 35 families still lack molecular data.
基金supported by the Thailand Research Fund BRG528002.
文摘Trichomerium is a genus of foliar epiphytes with the appearance of sooty moulds,mostly occurring on the surface of living leaves and apparently gaining their nutrients from insect exudates.Species have ascostromata with setae and develop on a loosely interwoven mycelial mass of dark brown hyphae,while asci have a bitunicate appearance with hyaline ascospores.In this study,we made 16 collections of Trichomerium from Thailand.All were isolated,and the LSU and ITS rDNA gene regions sequenced.Phylogenetic analysis indicated that the Trichomerium species form a monophyletic clade within Chaetothyriales and warrant the introduction of a new family Trichomeriaceae.Bootstrap support for the Chaetothyriales is 100%and clearly separates Trichomeriaceae from Capnodiales which are morphologically very similar.A detailed account of Trichomerium is provided and we describe and illustrate three new species based on morphological and molecular data.We propose that T.foliicola is adopted as the generic type of Trichomerium because it has been impossible to obtain the holotype specimen of T.coffeicola and also no molecular data exists in worldwide databases for this species or genus.
文摘The family Melanommataceae is widespread in temperate and subtropical regions and species invariably occur on twigs or bark of various woody plants in terrestrial,marine or freshwater habitats.In this paper,the type species of 26 genera of the family are re-described and illustrated.A multi-gene phylogeny based on maximum likelihood and Bayesian analyses of LSU,SSU,RPB2 and EF-1αsequence data of species of Melanommataceae is provided.The new genera,Muriformistrickeria,Pseudostrickeria and Thysanolaenae are introduced.Anomalemma is synonymized under Exosporiella.Acrocordiopsis,Astrosphaeriella,Beverwykella,Caryosporella,Sporidesmiella and Pseudotrichia are excluded from Melanommataceae based on molecular phylogenetic analyses.Presently,20 genera are accepted in Melanommataceae.Based on the phylogenetic data,five new species,Byssosphaeria siamensis,Herpotrichia vaginatispora,Pseudostrickeria muriformis,Pseudostrickeria ononidis and Muriformistrickeria rubi,are introduced.
基金supported by the Fundamental Research Funds for the Central Non-profit Research Institution of CAF(grant no.CAFYBB2019QB005)the National Natural Science Foundation of China(grant no.31300019)+2 种基金the Science and Technology Foundation of Guizhou Province(No.[2017]5788)the Impact of climate change on fungal diversity and biogeography in the Greater Mekong Subregion(RDG6130001)The future of specialist fungi in a changing climate:baseline data for generalist and specialist fungi associated with ants,Rhododendron species and Dracaena species(grant no:DBG6080013).Dr.R Jeewon thanks the University of Mauritius for research support.
文摘Micropeltidaceae species are flyspeck fungi which have been subjected to few systematic studies.We re-examined 27 genera which were accepted in the Micropeltidaceae and re-described them based on herbaria materials and protologues.Based on morphology and phylogenetic investigations,we transfer Micropeltidaceae to a new order,Micropeltidales(Lecanoromycetes).Genera with bluish or greenish upper walls(Dictyopeltella,Dictyothyriella,Dictyothyrina,Dictyothyrium,Haplopeltheca,Micropeltis,Scolecopeltidium and Stomiopeltopsis)are accepted in the new taxonomic concept for Micropeltidaceae.A molecular clock approach estimated the divergence time of the Micropeltidaceae crown group at 130(165–104)Mya,which also supports its rank as an order(diverging from 220–100 Mya).The evolutionary histories between Micropeltidaceae species and host plants are interpreted by cophylogenetic analyses calibrated by their divergence times.The result indicates that the diversification of Angiospermae(130–80 Mya)fosters the formation of genera of Micropeltidaceae mainly via cospeciation events,and this codivergent period would be an important reference when establishing generic boundaries of epifoliar fungi.
文摘This article is the 14th in the Fungal Diversity Notes series,wherein we report 98 taxa distributed in two phyla,seven classes,26 orders and 50 families which are described and illustrated.Taxa in this study were collected from Australia,Brazil,Burkina Faso,Chile,China,Cyprus,Egypt,France,French Guiana,India,Indonesia,Italy,Laos,Mexico,Russia,Sri Lanka,Thailand,and Vietnam.There are 59 new taxa,39 new hosts and new geographical distributions with one new combination.The 59 new species comprise Angustimassarina kunmingense,Asterina lopi,Asterina brigadeirensis,Bartalinia bidenticola,Bartalinia caryotae,Buellia pruinocalcarea,Coltricia insularis,Colletotrichum fexuosum,Colletotrichum thasutense,Coniochaeta caraganae,Coniothyrium yuccicola,Dematipyriforma aquatic,Dematipyriforma globispora,Dematipyriforma nilotica,Distoseptispora bambusicola,Fulvifomes jawadhuvensis,Fulvifomes malaiyanurensis,Fulvifomes thiruvannamalaiensis,Fusarium purpurea,Gerronema atrovirens,Gerronema favum,Gerronema keralense,Gerronema kuruvense,Grammothele taiwanensis,Hongkongmyces changchunensis,Hypoxylon inaequale,Kirschsteiniothelia acutisporum,Kirschsteiniothelia crustaceum,Kirschsteiniothelia extensum,Kirschsteiniothelia septemseptatum,Kirschsteiniothelia spatiosum,Lecanora immersocalcarea,Lepiota subthailandica,Lindgomyces guizhouensis,Marthe asmius pallidoaurantiacus,Marasmius tangerinus,Neovaginatispora mangiferae,Pararamichloridium aquisubtropicum,Pestalotiopsis piraubensis,Phacidium chinaum,Phaeoisaria goiasensis,Phaeoseptum thailandicum,Pleurothecium aquisubtropicum,Pseudocercospora vernoniae,Pyrenophora verruculosa,Rhachomyces cruralis,Rhachomyces hyperommae,Rhachomyces magrinii,Rhachomyces platyprosophi,Rhizomarasmius cunninghamietorum,Skeletocutis cangshanensis,Skeletocutis subchrysella,Sporisorium anadelphiae-leptocomae,Tetraploa dashaoensis,Tomentella exiguelata,Tomentella fuscoaraneosa,Tricholomopsis lechatii,Vaginatispora favispora and Wetmoreana blastidiocalcarea.The new combination is Torula sundara.The 39 new records on hosts and geographical distribution comprise Apiospora guiyangensis,Aplosporella artocarpi,Ascochyta medicaginicola,Astrocystis bambusicola,Athelia rolfsii,Bambusicola bambusae,Bipolaris luttrellii,Botryosphaeria dothidea,Chlorophyllum squamulosum,Colletotrichum aeschynomenes,Colletotrichum pandanicola,Coprinopsis cinerea,Corylicola italica,Curvularia alcornii,Curvularia senegalensis,Diaporthe foeniculina,Diaporthe longicolla,Diaporthe phaseolorum,Diatrypella quercina,Fusarium brachygibbosum,Helicoma aquaticum,Lepiota metulispora,Lepiota pongduadensis,Lepiota subvenenata,Melanconiella meridionalis,Monotosporella erecta,Nodulosphaeria digitalis,Palmiascoma gregariascomum,Periconia byssoides,Periconia cortaderiae,Pleopunctum ellipsoideum,Psilocybe keralensis,Scedosporium apiospermum,Scedosporium dehoogii,Scedosporium marina,Spegazzinia deightonii,Torula fci,Wiesneriomyces laurinus and Xylaria venosula.All these taxa are supported by morphological and multigene phylogenetic analyses.This article allows the researchers to publish fungal collections which areimportant for future studies.An updated,accurate and timely report of fungus-host and fungus-geography is important.We also provide an updated list of fungal taxa published in the previous fungal diversity notes.In this list,erroneous taxa and synonyms are marked and corrected accordingly.
基金The authors extend their appreciation to the International Scientific Partnership Program ISPP at King Saud University for funding this research work through ISPP#0089.Kevin D.Hyde would like to thank the Molecular Biology Experimental Center for the help on molecular work,the Mushroom Research Foundation(MRF),Chiang Rai,Thailand,the Thailand Research Fund grant no RSA5980068 entitled Biodiversity,Phylogeny and role of fungal endophytes on above parts of Rhizophora apiculata and Nypa fruticans,the Chinese Academy of Sciences,Project Number 2013T2S0030for the award of Visiting Professorship for Senior International Scientists at Kunming Institute of Botany and Mae Fah Luang University for a grants“Biodiversity,phylogeny and role of fungal endophytes of Pandanaceae”(Grant number:592010200112)+11 种基金“Diseases of mangrove trees and maintenance of good forestry practice”(Grant number:60201000201 for supporting this study.K.D.Hyde is an Adjunct Professor at Chiang Mai University.Financial support by the German Academic Exchange Service(DAAD)and the Thai Royal Golden Ph.D.Jubilee-Industry program(RGJ)for a joint TRF-DAAD PPP(2012-2014)academic exchange grant to Kevin D.Hyde and Marc Stadler,and the RGJ for a personal grant to Benjarong Thongbai(No.Ph.D/0138/2553 in 4.S.MF/53/A.3)is gratefully acknowledged.Satinee Suetrong thanks to Apilux Loilong for collecting samples.This work was supported by the TRF/BIOTEC program for Biodiversity Research and Training Grant BRT R_352112,R_249001,R_251006.For their continued interest and support we also thank BIOTEC,Prof.Morakot Tanticharoen,Dr.Kanyawim Kirtikara and Dr.Lily Eurwilaichitr.Rungtiwa Phookamsak expresses appreciation to The CAS President’s International Fellowship for Postdoctoral Researchers,project number 2017PB0072the Research Fund from China Postdoctoral Science Foundation(Grant No.Y71B283261)and Chiang Mai University for financial supportWe would like to thank DrsRobert Lucking,AndreAptroot and Cecile Gueidan for available suggestion.Saranyaphat Boonmee would like to thank the National Research Council of Thailand(no.2560A30702021)the Thailand Research Fund(Project No.TRG5880152)Chayanard Phukhamsakda would like to thank Royal Golden Jubilee Ph.D.Program under Thailand Research Fund,for the award of a scholarship no.PHD/0020/2557.Ausana Mapook is grateful to Research and Researchers for Industries(RRI)PHD57I0012.Ting-Chi Wen and Yuan-Pin Xiao are grateful to The National Natural Science Foundation of China(Nos.31460012 and 3161113034)Samantha C.Karunarathna thanks Yunnan Provincial Department of Human Resources and Social Security funded postdoctoral project(Number 179122)for supporting his postdoctoral research study.Ivana Kusan and Zdenko Tkalcec have been partially supported by Croatian Science Foundation under the project HRZZIP-11-2013-2202(ACCTA)We would also like to thank Roman Ozimec and Najla Bakovicfor collecting the samples and partially Oikon Ltd.for financing the fieldwork.We would like to thank Dr.Shaun Pennycook for checking most of the Latin names.Qing Tian and Putarak Chomnunti extend their sincere thanks to the National Research Council of Thailand(grant for Dothideomycetes No.2560A30702014)Putarak Chomnunti would like to thanks for Thailand Research Fund grant no.MRG6080089Dr.Rajesh Jeewon is grateful to University of Mauritius and Mae Fah Luang University for research support.Olinto L.Pereira thank the CAPES,CNPq and FAPEMIG for financial support and ICMBio/FLONA-Paraopeba for providing facilities and permits for the exploration surveys of the mycodiversity in their protected areas.Young Woon Lim and Hyun Lee are grateful to the National Institute of Biological Resources(NIBR 20171104)Republic of Korea.The study was partially supported by the National Science Centre,Poland under grant No.2015/17/D/NZ8/00778 to Julia Pawłowska and UMO-2016/23/B/NZ8/00897 to Marta Wrzosek.Anna Bazzicalupo,Bart Buyck,Daniel Miller and Mary L.Berbee thank WTU and the Burke Museum for scanned images of Benjamin Woo’s datasheets and photographs of Russula specimens and for the loan of Woo’s specimens.Mary L.Berbee acknowledges support by Discovery Grant RGPIN-2016-03746National Science and Engineering Research Council of Canada.Anna Bazzicalupo acknowledges the student grants for field work and study abroad from the NSERC CREATE Training Program in Biodiversity Research,Sonoma County Mycological Association Student Grant,and Daniel E.Stuntz Memorial Foundation Individual Grant.The Key Research Program of Frontier Sciences of the Chinese Academy of Sciences(grant number QYZDY-SSW-SMC014)is also thanked for support.
文摘This is the sixth in a series of papers where we bring collaborating mycologists together to produce a set of notes of several taxa of fungi.In this study we introduce a new family Fuscostagonosporaceae in Dothideomycetes.We also introduce the new ascomycete genera Acericola,Castellaniomyces,Dictyosporina and Longitudinalis and new species Acericola italica,Alternariaster trigonosporus,Amarenomyces dactylidis,Angustimassarina coryli,Astrocystis bambusicola,Castellaniomyces rosae,Chaetothyrina artocarpi,Chlamydotubeufia krabiensis,Colletotrichum lauri,Collodiscula chiangraiensis,Curvularia palmicola,Cytospora mali-sylvestris,Dictyocheirospora cheirospora,Dictyosporina ferruginea,Dothiora coronillae,Dothiora spartii,Dyfrolomyces phetchaburiensis,Epicoccum cedri,Epicoccum pruni,Fasciatispora calami,Fuscostagonospora cytisi,Grandibotrys hyalinus,Hermatomyces nabanheensis,Hongkongmyces thailandica,Hysterium rhizophorae,Jahnula guttulaspora,Kirschsteiniothelia rostrata,Koorchalomella salmonispora,Longitudinalis nabanheensis,Lophium zalerioides,Magnibotryascoma mali,Meliola clerodendri-infortunati,Microthyrium chinense,Neodidymelliopsis moricola,Neophaeocryptopus spartii,Nigrograna thymi,Ophiocordyceps cossidarum,Ophiocordyceps issidarum,Ophiosimulans plantaginis,Otidea pruinosa,Otidea stipitata,Paucispora kunmingense,Phaeoisaria microspora,Pleurothecium floriforme,Poaceascoma halophila,Periconia aquatica,Periconia submersa,Phaeosphaeria acaciae,Phaeopoacea muriformis,Pseudopithomyces kunmingnensis,Ramgea ozimecii,Sardiniella celtidis,Seimatosporium italicum,Setoseptoria scirpi,Torula gaodangensis and Vamsapriya breviconidiophora.We also provide an amended account of Rhytidhysteron to include apothecial ascomata and a J?hymenium.The type species of Ascotrichella hawksworthii(Xylariales genera incertae sedis),Biciliopsis leptogiicola(Sordariomycetes genera incertae sedis),Brooksia tropicalis(Micropeltidaceae),Bryochiton monascus(Teratosphaeriaceae),Bryomyces scapaniae(Pseudoperisporiaceae),Buelliella minimula(Dothideomycetes genera incertae sedis),Carinispora nypae(Pseudoastrosphaeriellaceae),Cocciscia hammeri(Verrucariaceae),Endoxylina astroidea(Diatrypaceae),Exserohilum turcicum(Pleosporaceae),Immotthia hypoxylon(Roussoellaceae),Licopolia franciscana(Vizellaceae),Murispora rubicunda(Amniculicolaceae)and Doratospora guianensis(synonymized under Rizalia guianensis,Trichosphaeriaceae)were reexamined and descriptions,illustrations and discussion on their familial placement are given based on phylogeny and morphological data.New host records or new country reports are provided for Chlamydotubeufia huaikangplaensis,Colletotrichum fioriniae,Diaporthe subclavata,Diatrypella vulgaris,Immersidiscosia eucalypti,Leptoxyphium glochidion,Stemphylium vesicarium,Tetraploa yakushimensis and Xepicula leucotricha.Diaporthe baccae is synonymized under Diaporthe rhusicola.A reference specimen is provided for Periconia minutissima.Updated phylogenetic trees are provided for most families and genera.We introduce the new basidiomycete species Agaricus purpurlesquameus,Agaricus rufusfibrillosus,Lactifluus holophyllus,Lactifluus luteolamellatus,Lactifluus pseudohygrophoroides,Russula benwooii,Russula hypofragilis,Russula obscurozelleri,Russula parapallens,Russula phoenicea,Russula pseudopelargonia,Russula pseudotsugarum,Russula rhodocephala,Russula salishensis,Steccherinum amapaense,Tephrocybella constrictospora,Tyromyces amazonicus and Tyromyces angulatus and provide updated trees to the genera.We also introduce Mortierella formicae in Mortierellales,Mucoromycota and provide an updated phylogenetic tree.
基金financial support from European Funds through COMPETENational Funds through the Portuguese Foundation for Science and Technology(FCT)within projects PTDC/AGR-FOR/3807/2012-FCOMP-01-0124-FEDER-027979 and PEst-C/MAR/LA0017/2013+4 种基金supported by National Science Foundation Grant DBI 1046115supported by FFG,BMWFJ,BMVIT,ZIT,Zukunftsstiftung Tirol,and Land Steiermark within the Austrian COMET program FFG Grant 824186Financial support to JP was partially provided by the Polish Ministry of Science and Higher Education(MNiSW),grant no.NN303_548839financial support from FAPEMIG and CNPqfunded by the Government of Canada through Genome Canada and the Ontario Genomics Institute through the Biomonitoring 2.0 project(OGI-050).
文摘Plant pathogenic fungi are a large and diverse assemblage of eukaryotes with substantial impacts on natural ecosystems and human endeavours.These taxa often have complex and poorly understood life cycles,lack observable,discriminatory morphological characters,and may not be amenable to in vitro culturing.As a result,species identification is frequently difficult.Molecular(DNA sequence)data have emerged as crucial information for the taxonomic identification of plant pathogenic fungi,with the nuclear ribosomal internal transcribed spacer(ITS)region being the most popular marker.However,international nucleotide sequence databases are accumulating numerous sequences of compromised or low-resolution taxonomic annotations and substandard technical quality,making their use in the molecular identification of plant pathogenic fungi problematic.Here we report on a concerted effort to identify high-quality reference sequences for various plant pathogenic fungi and to re-annotate incorrectly or insufficiently annotated public ITS sequences from these fungal lineages.A third objective was to enrich the sequences with geographical and ecological metadata.The results-a total of 31,954 changes-are incorporated in and made available through the UNITE database for molecular identification of fungi(http://unite.ut.ee),including standalone FASTA files of sequence data for local BLAST searches,use in the next-generation sequencing analysis platforms QIIME and mothur,and related applications.The present initiative is just a beginning to cover the wide spectrum of plant pathogenic fungi,and we invite all researchers with pertinent expertise to join the annotation effort.
