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转录组数据分析鉴定心房颤动患者的相关基因
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作者 李硕 平政 +2 位作者 牛慧茹 袁钰青 曹雪滨 《中国循证心血管医学杂志》 2025年第7期774-780,共7页
目的根据心房颤动患者的表达谱数据以生物信息学方式筛选出心房颤动的关键致病基因。方法通过基因表达综合数据库(Gene expression omnibus,GEO)筛选出心房颤动数据集GSE79768和GSE41177。使用R语言提取GSE79768数据集中的表达数据后进... 目的根据心房颤动患者的表达谱数据以生物信息学方式筛选出心房颤动的关键致病基因。方法通过基因表达综合数据库(Gene expression omnibus,GEO)筛选出心房颤动数据集GSE79768和GSE41177。使用R语言提取GSE79768数据集中的表达数据后进行t检验,筛选差异基因的标准设定为P<0.05且基因表达量的变化幅度(|logFC|)超过0.585;利用加权基因共表达网络分析(Weighted Gene Co-Expression Network Analysis,WGCNA)以及最小绝对收缩和选择算子(Least Absolute Shrinkage and Selection Operator,LASSO)回归模型筛选疾病关键基因,并对关键基因进行基因本体(Gene ontology,GO)通路分析和GO语义相似性。最后,通过单样本基因集富集分析(Single-sample gene set enrichment analysis,ssGSEA)算法分析免疫细胞在心房颤动中的浸润,采用Pearson相关性检验分析免疫细胞与关键基因的相关性。结果共筛选出五个潜在的诊断关键基因,分别为LRRC39、LBH、RGS18、WIF1与EIF5A,其中LRRC39、LBH、RGS18均与中性粒细胞的浸润程度呈正相关,均参与NOTCH信号通路。结论LRRC39、LBH、RGS18、WIF1和EIF5A基因与肥大细胞、中性粒细胞、NK细胞显著相关,且与心房颤动的发生具有紧密联系,或可成为心房颤动的潜在诊断基因,从而为临床诊断提供依据。 展开更多
关键词 心房颤动 生物信息学 免疫浸润 差异表达基因
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Unlocking the power of swine gut bacteria:newly isolated Blautia strain and its metabolites inhibit the replication of Salmonella Typhimurium in macrophages and alleviate DSS‑induced colitis in mice
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作者 Jiatong Wei Yang Liu +20 位作者 Hua Li Ze Lu Yanjiao Liu Yifan Zhang Cong Lan Aimin Wu Jun He Jingyi Cai Gang Tian Daiwen Chen Bing Yu Zhiqing Huang ping zheng Xiangbing Mao Jie Yu Junqiu Luo Hui Yan Jiayong Tang Huifen Wang Quyuan Wang Yuheng Luo 《Journal of Animal Science and Biotechnology》 2025年第5期2213-2233,共21页
Background Inflammatory bowel disease is a significant health concern for both humans and large-scale farm animals.In the quest for effective alternatives to antibiotics,next-generation probiotics(NGPs)have emerged as... Background Inflammatory bowel disease is a significant health concern for both humans and large-scale farm animals.In the quest for effective alternatives to antibiotics,next-generation probiotics(NGPs)have emerged as a promising option.The genus Blautia presents a rich source of potential NGP strains.Here we successfully isolated Blautia hominis LYH1 strain from the intestines of healthy weaned piglets and characterized its biological traits.Its antiinflammatory activity was then assessed using macrophages,while its protective effects against colitis and gut barrier damage were validated in a DSS-induced mouse colitis model.Results B.hominis LYH1 displayed typical characteristics of an obligate anaerobe,including non-hemolytic and nonmotile features,and a genome enriched with carbohydrate-active enzyme genes.It produced metabolites with antibiotic-like compounds,demonstrating antimicrobial activity against Escherichia coli.In vitro,B.hominis LYH1 effectively inhibited pathogen replication in macrophages,reducing cellular infections and alleviating inflammatory damage.In vivo,oral administration of B.hominis LYH1 or its metabolites significantly mitigated DSS-induced colitis in mice by suppressing pro-inflammatory cytokines,inhibiting T-lymphocyte activation,and enhancing short-chain fatty acid production.Conclusions Our findings underscore B.hominis LYH1’s potential as a NGP for maintaining gut health and combating intestinal inflammation.These findings offer valuable insights into the development of antibiotic alternatives and innovative strategies for preventing and treating enteritis in both agricultural and medical settings. 展开更多
关键词 Blautia hominis COLITIS Inflammation MACROPHAGE
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Review of Fault Diagnosis and Fault-tolerant Control Technologies for Permanent-magnet Synchronous Machine
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作者 ping zheng Wei Liu +2 位作者 Yiteng Gao Chengde Tong Yi Sui 《CES Transactions on Electrical Machines and Systems》 2025年第3期320-339,共20页
Permanent-magnet synchronous machines(PMSMs)are widely used in robotics,rail transportation,and electric vehicles owing to their high power density,high efficiency,and high power factor.However,PMSMs often operate in ... Permanent-magnet synchronous machines(PMSMs)are widely used in robotics,rail transportation,and electric vehicles owing to their high power density,high efficiency,and high power factor.However,PMSMs often operate in harsh environments,where critical components such as windings and permanent magnets(PMs)are susceptible to failures.These faults can lead to a significant degradation in performance,posing substantial challenges to the reliable operation of PMSMs.This paper presents a comprehensive review of common fault types in PMSMs,along with their corresponding fault diagnosis and fault-tolerant control strategies.The underlying mechanisms of typical faults are systematically analyzed,followed by a detailed comparison of various diagnostic and fault-tolerant control methods to evaluate their respective advantages and limitations.Finally,the review concludes by identifying key research gaps in PMSM fault diagnosis and fault-tolerant control,while proposing potential future directions for advancing this field. 展开更多
关键词 Permanent-magnet synchronous machine(PMSM) Fault detection Fault diagnosis FAULT-TOLERANT
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Brief introduction to the historical development and therapeutic effects of cupping therapy in traditional Chinese medicine
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作者 ping Zhou Wei-Jie Xie ping zheng 《TMR Non-Drug Therapy》 2019年第1期27-34,共8页
Cupping therapy (CT) is an ancient traditional and complementary medicine practice. Recently, there has been a growing evidence of its potential benefits in the treatment of various diseases. The CT has been constantl... Cupping therapy (CT) is an ancient traditional and complementary medicine practice. Recently, there has been a growing evidence of its potential benefits in the treatment of various diseases. The CT has been constantly developing with the emergence of various modern and improved cupping devices. It is now evident that cupping could adjust the Qi, blood, Yin and Yang, dredge the meridian, as well as relieve the effect of illness, achieve fitness and relative equilibrium of Yin-Yang. It exerts its effects through the negative pressure suction via the mechanical and thermal stimulations, and the negative pressure effects induced by cupping. This article gives an overview of CT practice, its historical development, as well as its therapeutic effects and mechanism. Furthermore, a new and updated classification of CT was briefly introduced. 展开更多
关键词 CUPPING therapy THERAPEUTIC mechanisms HISTORICAL development TCM
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Study of tree shrew biology and models: A booming and prosperous field for biomedical research 被引量:3
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作者 Yong-Gang Yao Li Lu +26 位作者 Rong-Jun Ni Rui Bi Ceshi Chen Jia-Qi Chen Eberhard Fuchs Marina Gorbatyuk Hao Lei Hongli Li Chunyu Liu Long-Bao Lv Kyoko Tsukiyama-Kohara Michinori Kohara Claudia Perez-Cruz Gregor Rainer Bao-Ci Shan Fang Shen An-Zhou Tang Jing Wang Wei Xia Xueshan Xia Ling Xu Dandan Yu Feng Zhang ping zheng Yong-Tang zheng Jumin Zhou Jiang-Ning Zhou 《Zoological Research》 SCIE CSCD 2024年第4期877-909,共33页
The tree shrew(Tupaia belangeri)has long been proposed as a suitable alternative to non-human primates(NHPs)in biomedical and laboratory research due to its close evolutionary relationship with primates.In recent year... The tree shrew(Tupaia belangeri)has long been proposed as a suitable alternative to non-human primates(NHPs)in biomedical and laboratory research due to its close evolutionary relationship with primates.In recent years,significant advances have facilitated tree shrew studies,including the determination of the tree shrew genome,genetic manipulation using spermatogonial stem cells,viral vector-mediated gene delivery,and mapping of the tree shrew brain atlas.However,the limited availability of tree shrews globally remains a substantial challenge in the field.Additionally,determining the key questions best answered using tree shrews constitutes another difficulty.Tree shrew models have historically been used to study hepatitis B virus(HBV)and hepatitis C virus(HCV)infection,myopia,and psychosocial stress-induced depression,with more recent studies focusing on developing animal models for infectious and neurodegenerative diseases.Despite these efforts,the impact of tree shrew models has not yet matched that of rodent or NHP models in biomedical research.This review summarizes the prominent advancements in tree shrew research and reflects on the key biological questions addressed using this model.We emphasize that intensive dedication and robust international collaboration are essential for achieving breakthroughs in tree shrew studies.The use of tree shrews as a unique resource is expected to gain considerable attention with the application of advanced techniques and the development of viable animal models,meeting the increasing demands of life science and biomedical research. 展开更多
关键词 Tree shrew Animal model Neurodegenerative diseases Infectious diseases NEUROSCIENCE Phenome
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Automated and integrated ultrahigh throughput screening for industrial strain enabled by acoustic-droplet-ejection mass spectrometry 被引量:1
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作者 Zhidan Zhang Chao Zhang +8 位作者 Xu Zhang Jiuzhou Chen Ningyun Cai Shasha Zhong Zhibo Han Yan Zhu ping zheng Jibin Sun Changxiao Liu 《Journal of Pharmaceutical Analysis》 SCIE CAS CSCD 2024年第9期1390-1392,共3页
Synthetic biology provides unprecedented opportunities to tackle critical issues including climate change and sustainable development by constructing microbial cell factories to produce industrially valuable biochemic... Synthetic biology provides unprecedented opportunities to tackle critical issues including climate change and sustainable development by constructing microbial cell factories to produce industrially valuable biochemicals,biofuels,and biomaterials using renewable biomass resources[1],where strain screening for specific metabolic traits is a critical step.Rapid,accurate,and simultaneous quantification of multiple metabolites is critical for multi-perspective strain performance evaluation and strain screening,and a generalized method or platform will also reduce method development time to speed up the screening process. 展开更多
关键词 STRAIN CRITICAL SCREENING
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The influence of iron nutrition on the development of intestine and immune cell divergency in neonatal pigs 被引量:1
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作者 Yao Liu Aimin Wu +9 位作者 Bing Yu Jun He Jie Yu Xiangbing Mao ping zheng Yuheng Luo Junqiu Luo Junning Pu Hui Yan Daiwen Chen 《Journal of Animal Science and Biotechnology》 CSCD 2024年第6期2418-2431,共14页
Background Appropriate iron supplementation is essential for neonatal growth and development.However,there are few reports on the effects of iron overload on neonatal growth and immune homeostasis.Thus,the aim of this... Background Appropriate iron supplementation is essential for neonatal growth and development.However,there are few reports on the effects of iron overload on neonatal growth and immune homeostasis.Thus,the aim of this study was to investigate the effects of iron nutrition on neonatal growth and intestinal immunity by administering different levels of iron to neonatal pigs.Results We found that iron deficiency and iron overload resulted in slow growth in neonatal pigs.Iron deficiency and iron overload led to down-regulation of jejunum intestinal barrier and antioxidant marker genes,and promoted CD8^(+)T cell differentiation in jejunum and mesenteric lymph nodes(MLN)of pigs,disrupting intestinal health.Moreover,iron levels altered serum iron and tissue iron status leading to disturbances in redox state,affecting host innate and adaptive immunity.Conclusions These findings emphasized the effect of iron nutrition on host health and elucidated the importance of iron in regulating redox state and immunity development.This study provided valuable insights into the regulation of redox state and immune function by iron metabolism in early life,thus contributing to the development of targeted interventions and nutritional strategies to optimize iron nutrition in neonates. 展开更多
关键词 Immune cells INTESTINE Iron nutrition NEONATES Redox homeostasis
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Reconstruction the feedback regulation of amino acid metabolism to develop a non-auxotrophic l-threonine producing Corynebacterium glutamicum 被引量:3
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作者 Jianhang Liu Jiao Liu +11 位作者 Jiajun Li Xiaojia Zhao Guannan Sun Qianqian Qiao Tuo Shi Bin Che Jiuzhou Chen Qianqian Zhuang Yu Wang Jibin Sun Deqiang Zhu ping zheng 《Bioresources and Bioprocessing》 2024年第1期599-609,共11页
l-Threonine is an important feed additive with the third largest market size among the amino acids produced by microbial fermentation.The GRAS(generally regarded as safe)industrial workhorse Corynebacterium glutamicum... l-Threonine is an important feed additive with the third largest market size among the amino acids produced by microbial fermentation.The GRAS(generally regarded as safe)industrial workhorse Corynebacterium glutamicum is an attractive chassis for l-threonine production.However,the present l-threonine production in C.glutamicum cannot meet the requirement of industrialization due to the relatively low production level of l-threonine and the accumulation of large amounts of by-products(such as l-lysine,l-isoleucine,and glycine).Herein,to enhance the l-threonine biosynthesis in C.glutamicum,releasing the aspartate kinase(LysC)and homoserine dehydrogenase(Hom)from feedback inhibition by l-lysine and l-threonine,respectively,and overexpressing four flux-control genes were performed.Next,to reduce the formation of by-products l-lysine and l-isoleucine without the cause of an auxotrophic phenotype,the feedback regulation of dihydrodipicolinate synthase(DapA)and threonine dehydratase(IlvA)was strengthened by replacing the native enzymes with heterologous analogues with more sensitive feedback inhibition by l-lysine and l-isoleucine,respectively.The resulting strain maintained the capability of synthesizing enough amounts of l-lysine and l-isoleucine for cell biomass formation but exhibited almost no extracellular accumulation of these two amino acids.To further enhance l-threonine production and reduce the by-product glycine,l-threonine exporter and homoserine kinase were overexpressed.Finally,the rationally engineered non-auxotrophic strain ZcglT9 produced 67.63 g/L(17.2%higher)l-threonine with a productivity of 1.20 g/L/h(108.0%higher)in fed-batch fermentation,along with significantly reduced by-product accumulation,representing the record for l-threonine production in C.glutamicum.In this study,we developed a strategy of reconstructing the feedback regulation of amino acid metabolism and successfully applied this strategy to de novo construct a non-auxotrophic l-threonine producing C.glutamicum.The main end by-products including l-lysine,l-isoleucine,and glycine were almost eliminated in fed-batch fermentation of the engineered C.glutamicum strain.This strategy can also be used for engineering producing strains for other amino acids and derivatives. 展开更多
关键词 L-THREONINE Corynebacterium glutamicum BY-PRODUCT Allosteric regulation Transport engineering
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All-trans retinoic acid alleviates transmissible gastroenteritis virus-induced intestinal inflammation and barrier dysfunction in weaned piglets
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作者 Junning Pu Daiwen Chen +10 位作者 Gang Tian Jun He ping zheng Zhiqing Huang Xiangbing Mao Jie Yu Yuheng Luo Junqiu Luo Hui Yan Aimin Wu Bing Yu 《Journal of Animal Science and Biotechnology》 SCIE CAS CSCD 2024年第3期1131-1144,共14页
Background Transmissible gastroenteritis virus(TGEV)is one of the main pathogens causing severe diarrhea of pig-lets.The pathogenesis of TGEV is closely related to intestinal inflammation.All-trans retinoic acid(ATRA)... Background Transmissible gastroenteritis virus(TGEV)is one of the main pathogens causing severe diarrhea of pig-lets.The pathogenesis of TGEV is closely related to intestinal inflammation.All-trans retinoic acid(ATRA)is the main active metabolite of vitamin A,which has immunomodulatory and anti-inflammatory properties.However,it is unclear whether ATRA can alleviate TGEV-induced intestinal inflammation and barrier dysfunction in piglets.This study aimed to investigate the effects of ATRA on growth performance,diarrhea,intestinal inflammation and intesti-nal barrier integrity of TGEV-challenged piglets.Methods In a 19-d study,32 weaned piglets were randomly divided into 4 treatments:Control group(basal diet),TGEV group(basal diet+TGEV challenge),TGEV+ATRA5 group(basal diet+5 mg/d ATRA+TGEV challenge)and TGEV+ATRA15 group(basal diet+15 mg/d ATRA+TGEV challenge).On d 14,piglets were orally administered TGEV or the sterile medium.Results Feeding piglets with 5 and 15 mg/d ATRA alleviated the growth inhibition and diarrhea induced by TGEV(P<0.05).Feeding piglets with 5 and 15 mg/d ATRA also inhibited the increase of serum diamine oxidase(DAO)activ-ity and the decrease of occludin and claudin-1 protein levels in jejunal mucosa induced by TGEV,and maintained intestinal barrier integrity(P<0.05).Meanwhile,5 mg/d ATRA feeding increased the sucrase activity and the expres-sions of nutrient transporter related genes(GLUT2 and SLC7A1)in jejunal mucosa of TGEV-challenged piglets(P<0.05).Furthermore,5 mg/d ATRA feeding attenuated TGEV-induced intestinal inflammatory response by inhibit-ing the release of interleukin(IL)-1β,IL-8 and tumor necrosis factor-α(TNF-α),and promoting the secretion of IL-10 and secretory immunoglobulin A(sIgA)(P<0.05).Feeding 5 mg/d ATRA also down-regulated the expressions of Toll-like receptors and RIG-I like receptors signaling pathway related genes(TLR3,TLR4,RIG-I,MyD88,TRIF and MAVS)and the phosphorylation level of nuclear factor-κB-p65(NF-κB p65),and up-regulated the inhibitor kappa B alpha(IκBα)protein level in jejunal mucosa of TGEV-challenged piglets(P<0.05).Conclusions ATRA alleviated TGEV-induced intestinal barrier damage by inhibiting inflammatory response,thus improving the growth performance and inhibiting diarrhea of piglets.The mechanism was associated with the inhibi-tion of NF-κB signaling pathway mediated by TLR3,TLR4 and RIG-I. 展开更多
关键词 All-trans retinoic acid INFLAMMATION Intestinal barrier PIGLETS Transmissible gastroenteritis virus
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Single crystal growth and transport properties of narrow-bandgap semiconductor RhP_(2)
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作者 吴德胜 郑萍 雒建林 《Chinese Physics B》 SCIE EI CAS CSCD 2024年第8期545-549,共5页
We report the growth of high-quality single crystals of RhP_(2),and systematically study its structure and physical properties by transport,magnetism,and heat capacity measurements.Single-crystal x-ray diffraction rev... We report the growth of high-quality single crystals of RhP_(2),and systematically study its structure and physical properties by transport,magnetism,and heat capacity measurements.Single-crystal x-ray diffraction reveals that RhP_(2) adopts a monoclinic structure with the cell parameters a=5.7347(10)A,b=5.7804(11)A,and c=5.8222(11)A,space group P2_(1)/c(No.14).The electrical resistivityρ(T)measurements indicate that RhP_(2) exhibits narrow-bandgap behavior with the activation energies of 223.1 meV and 27.4 meV for two distinct regions,respectively.The temperaturedependent Hall effect measurements show electron domain transport behavior with a low charge carrier concentration.We find that RhP_(2) has a high mobilityμ_(e)~210 cm^(2)·V^(-1)·s^(-1)with carrier concentrations n_(e)~3.3×10^(18)cm^(3) at 300 K with a narrow-bandgap feature.The high mobilityμ_(e) reaches the maximum of approximately 340 cm^(2)·V^(-1)·s^(-1)with carrier concentrations n_^(e)~2×10^(18)cm^(-3)at 100 K.No magnetic phase transitions are observed from the susceptibilityχ(T)and specific heat C_(p)(T)measurements of RhP_(2).Our results not only provide effective potential as a material platform for studying exotic physical properties and electron band structures but also motivate further exploration of their potential photovoltaic and optoelectronic applications. 展开更多
关键词 single crystal growth narrow band system electrical transport high mobilities
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The neuroscience of pain,addiction,and anesthesia
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作者 Ji Hu ping zheng 《Zoological Research》 SCIE CSCD 2024年第3期709-710,共2页
Researchers and clinicians have long been interested in the mechanisms of pain,anesthesia,and addiction.The International Association for the Study of Pain(IASP)defines pain as an unpleasant sensory and emotional expe... Researchers and clinicians have long been interested in the mechanisms of pain,anesthesia,and addiction.The International Association for the Study of Pain(IASP)defines pain as an unpleasant sensory and emotional experience associated with,or resembling that associated with,actual or potential tissue damage(Raja et al.,2020).Drug addiction refers to a condition of reliance that develops from regular drug consumption,which may lead to withdrawal symptoms when use is halted.Anesthesia involves the complete loss of consciousness induced by an inhaled or intravenous anesthetic(Tosello et al.,2022).In this special collection,Zoological Research presents research findings focused on pain,addiction,and anesthesia. 展开更多
关键词 ANESTHESIA DAMAGE
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Effects of replacing soybean meal with enzymolysis-fermentation compound protein feed on growth performance,apparent digestibility of nutrients,carcass traits,and meat quality in growing-finishing pig
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作者 Yu Cheng Jun He +10 位作者 ping zheng Jie Yu Junning Pu Zhiqing Huang Xiangbing Mao Yuheng Luo Junqiu Luo Hui Yan Aimin Wu Bing Yu Daiwen Chen 《Journal of Animal Science and Biotechnology》 CSCD 2024年第6期2656-2668,共13页
Background Addressing the shortage of high-quality protein resources,this study was conducted to investigate the effects of replacing soybean meal(SBM)with different levels of enzymolysis-fe rmentation compound protei... Background Addressing the shortage of high-quality protein resources,this study was conducted to investigate the effects of replacing soybean meal(SBM)with different levels of enzymolysis-fe rmentation compound protein feed(EFCP)in the diets of growing—finishing pigs,focusing on growth perfo rmance,nutrients digestibility;carcass traits,and meat quality.Methods Sixty DLY(Durdcx LandracexYorkshire)pigs with an initial body weight of 42.76±2.05 kg were assigto 5 diietary treatments in a 2×2+1 factorial design.These dietary treatments included a corn-soybean meal diet(CON),untreated compound protein feed(UCP)substitution 50%(U50)and 100%SBM(U100)diets,and EFCP substitution 50%(EF50)and 100%SBM(EF100)diets.Each treatment had 6 pens(replicates)with 2 pigs per pen,and the experiment lasted 58 d,divided into phaseⅠ(1-28 d)and phaseⅡ(29-58 d).Following phaseⅠ,only the CON,U50,and EF50 groups were continued for phaseⅡ,each with 5 replicate pens.On d 59,a total of 15 pigs(1 pig/pen,5pens/treatment)were euthanized.Results During phaseⅠ,the EF50 group had a higher average daily gain(ADG)in pigs(P<0.05)compared to the CON group,whereas the U50 group did not have a significant difference.As the substitution ratio of UCP and EFCP increased in phaseⅠ,there was a noticeable reduction in the final body weight and ADG(P<0.05),along with an increase in the feed-to-gain ratio(F/G)(P<0.05).In phaseⅡ,there were no significant differences in growth performance among the treatment groups,but EF50 increased the apparent digestibility of several nutrients(including dry matter,crude protein,crude fiber,acid detergent fiber,ash,gross energy)compared to U50.The EF50 group also exhibited significantly higher serum levels of neuropeptide Y and ghrelin compared to the CON and U50 groups(P<0.05),Moreover,the EF50 group had higher carcass weight and carcass length than those in the CON and U50groups(P<0.05),with no significant difference in meat quality.Conclusions The study findings suggest that replacing 50%SBM with EFCP during the growing-finishing period can improve the growth performance,nutrient digestibility,and carcass traits of pigs without compromising meat quality This research offers valuable insights into the modification of unconventional plant protein meals and developing alternatives to SBM. 展开更多
关键词 Compound protein feed Enzymolysis-fermentation Growing-finishing pigs Growth performance Nutrient digestibility
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谷氨酸棒杆菌的代谢工程使能技术研究进展 被引量:14
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作者 王钰 郑平 孙际宾 《生物工程学报》 CAS CSCD 北大核心 2021年第5期1603-1618,共16页
谷氨酸棒杆菌Corynebacterium glutamicum是重要的工业微生物,尤其是在氨基酸工业中,每年用于600余万t氨基酸的生物制造。近年来,谷氨酸棒杆菌代谢工程使能技术正在不断完善,不仅加快了细胞工厂的创建和优化,拓展了底物谱和产物谱,也推... 谷氨酸棒杆菌Corynebacterium glutamicum是重要的工业微生物,尤其是在氨基酸工业中,每年用于600余万t氨基酸的生物制造。近年来,谷氨酸棒杆菌代谢工程使能技术正在不断完善,不仅加快了细胞工厂的创建和优化,拓展了底物谱和产物谱,也推动了谷氨酸棒杆菌的基础研究,使谷氨酸棒杆菌成为代谢工程的理想底盘细胞。文中综述了近期针对谷氨酸棒杆菌开发的代谢工程使能技术,着重介绍了基于CRISPR的基因组编辑、基因表达调控、适应性进化和生物传感器等技术的开发和应用。 展开更多
关键词 谷氨酸棒杆菌 代谢工程 基因组编辑 表达调控 适应性进化 生物传感器
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面向工业生物技术的系统生物学 被引量:7
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作者 郑小梅 郑平 孙际宾 《生物工程学报》 CAS CSCD 北大核心 2019年第10期1955-1973,共19页
工业生物技术是以微生物细胞工厂利用可再生的生物原料来生产能源、材料与化学品等的生物技术,在解决资源、能源与环境等问题方面起着越来越重要的作用。系统生物学是全面解析微生物细胞工厂及其发酵过程从“黑箱”到“白箱”的重要研... 工业生物技术是以微生物细胞工厂利用可再生的生物原料来生产能源、材料与化学品等的生物技术,在解决资源、能源与环境等问题方面起着越来越重要的作用。系统生物学是全面解析微生物细胞工厂及其发酵过程从“黑箱”到“白箱”的重要研究方法。系统生物学借助基因组、转录组、蛋白质组、代谢组以及代谢流组等多组学数据,可解析微生物细胞工厂在RNA、蛋白与代谢物等不同水平上的变化规律与调控机制。目前,系统生物学在微生物细胞工厂的设计创建与发酵工艺优化中起着越来越重要的指导作用,许多成功应用实例不断涌现,推动着工业生物技术的快速发展。文中重点综述基因组、转录组、蛋白质组、代谢组与代谢流组以及基因组规模的网络模型等各组学技术的最新发展及其在工业生物技术尤其是菌株改造与发酵优化中的应用,并就工业生物技术中系统生物学的未来发展方向进行展望。 展开更多
关键词 工业生物技术 系统生物学 多组学 菌株设计 发酵优化
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基于CRISPR/Cas系统的黑曲霉基因组编辑技术 被引量:5
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作者 郑小梅 郑平 孙际宾 《生物工程学报》 CAS CSCD 北大核心 2021年第3期980-990,共11页
黑曲霉Aspergillus niger是有机酸与酶制剂的重要工业生产菌株,以极端环境耐受性、高生产经济性、强发酵鲁棒性与高食品安全性等优势成为不可多得的细胞工厂。合成生物学与系统生物学的快速发展,不仅拉开了全面揭示黑曲霉细胞工厂高效... 黑曲霉Aspergillus niger是有机酸与酶制剂的重要工业生产菌株,以极端环境耐受性、高生产经济性、强发酵鲁棒性与高食品安全性等优势成为不可多得的细胞工厂。合成生物学与系统生物学的快速发展,不仅拉开了全面揭示黑曲霉细胞工厂高效运转机制的序幕,而且为高效黑曲霉细胞工厂的创建优化提供了新技术体系。作为新一代的基因组编辑技术,基于CRISPR/Cas系统的基因组编辑技术为黑曲霉基因组定向改造与基因表达调控带来了革命性突破。本文重点综述该技术在黑曲霉中的最新进展及其在黑曲霉基因编辑与表达调控中的应用,并对其未来发展方向进行展望。 展开更多
关键词 黑曲霉 细胞工厂 CRISPR/Cas系统 基因组编辑
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The Effect of COVID-19 on the Cancer Patients Treated with Radiotherapy in Low Risk Area: A Single-Center Descriptive
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作者 ping zheng Junyi Cao +2 位作者 Ke Liu Ya Pang Dong Wang 《Journal of Cancer Therapy》 2022年第5期275-283,共9页
Objective: To investigate the influence of the new coronavirus epidemic on tumor radiotherapy patients in Zigong City, and provide radiotherapy feasibility and safety in other prefecture-level or low-risk areas. Metho... Objective: To investigate the influence of the new coronavirus epidemic on tumor radiotherapy patients in Zigong City, and provide radiotherapy feasibility and safety in other prefecture-level or low-risk areas. Methods: Retrospective Collection of data from January 31, 2020, in our hospital, this time period is an epidemic group. The control group was data from January 31, 2019-May 31, in our hospital. Patient data includes gender, age, tumor type, hospitalization fee, average hospitalization day, radiotherapy completion, treatment destination, and other information. Results: The patients with epidemic groups and control groups were 320 and 237, respectively, and the radiotherapy patients increased by 25.9%, increasing patients mainly from other departures outside the tumor department underperformance reform intervention. The epidemic group of brain and breast tumor patients were 39 and 37, respectively, with statistical differences (P < 0.05) compared to the control group (25 and 16 respectively). The number of tumor radiotherapy patients in other parts increased, but there was no statistical difference (P > 0.05). Inpatient costs, the average hospitalization day, radiotherapy completion, the purpose of treatment, and other data epidemic groups and control groups have no statistical difference (P > 0.05). Conclusion: The number of COVID-2019 epidemic interventions has increased the number of cancer radiotherapy patients in our hospital, and the epidemic situation has no effect on hospitalization, the average hospitalization day, radiotherapy, and the like. Optimizing the process of clinical treatment, strict prevention and control measures can ensure timely and safe radiotherapy in low-risk areas. 展开更多
关键词 COVID-2019 RADIOTHERAPY Prevention and Control Low-Risk Areas Single Center
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高兼容性分形阵列仿生天线设计 被引量:1
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作者 林斌 刘泽泰 +4 位作者 张颖 沈少东 魏昕煜 郑萍 张培涛 《无线通信》 2017年第5期170-177,共8页
本文针对移动通信系统、射频识别系统、超宽带系统、移动数字电视系统对天线的性能要求,创造性的将蝶形仿生天线与希尔伯特分形阵列相结合,设计了一款高兼容性分形阵列仿生天线,制作了天线样品并测试了天线的辐射特性。测试结果表明,该... 本文针对移动通信系统、射频识别系统、超宽带系统、移动数字电视系统对天线的性能要求,创造性的将蝶形仿生天线与希尔伯特分形阵列相结合,设计了一款高兼容性分形阵列仿生天线,制作了天线样品并测试了天线的辐射特性。测试结果表明,该款天线完全覆盖了第二代至第五代移动通信所有工作频段、射频识别系统频段、超宽带系统频段和移动数字电视系统频段。使用该天线的智能终端将兼具手机通信、射频卡读写、超宽带传输和移动数字电视等多种功能,该天线有较大的应用潜力。 展开更多
关键词 移动通信 射频识别 超宽带系统 移动数字电视 蝶形仿生天线 希尔伯特分形阵列
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双气囊和单气囊小肠镜对小肠疾病诊断价值的研究 被引量:9
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作者 余琪 李琴 +2 位作者 郑萍 胥明 卢水蓉 《中国内镜杂志》 2018年第3期16-21,共6页
目的比较双气囊和单气囊小肠镜对小肠疾病的诊断价值。方法 2014年7月-2016年8月因疑似小肠疾病而就诊的患者117例,根据治疗方法分为双气囊电子小肠镜组(DBE)68例和单气囊电子小肠镜组(SBE)49例,比较两组患者经口和经肛进镜的检查时间... 目的比较双气囊和单气囊小肠镜对小肠疾病的诊断价值。方法 2014年7月-2016年8月因疑似小肠疾病而就诊的患者117例,根据治疗方法分为双气囊电子小肠镜组(DBE)68例和单气囊电子小肠镜组(SBE)49例,比较两组患者经口和经肛进镜的检查时间、插镜深度、检出率和治疗率以及不同主诉情况和不同疾病的检出率,评价安全性。结果经口入镜和经肛入镜中,DBE组和SBE组的检查时间、插镜深度、检出率和治疗率比较差异均无统计学意义(P>0.05),两组对不明原因的消化道出血、腹痛、腹泻和其他的小肠疾病的检出率比较差异均无统计学意义(P>0.05),对克罗恩病、恶性肿瘤、良性肿瘤、小肠炎、非特异性溃疡、息肉、憩室和肺结核等的检出率比较差异均无统计学意义(P>0.05)。两组均未见严重并发症。结论 DBE和SBE对小肠疾病的检出率相当。 展开更多
关键词 双气囊电子小肠镜 单气囊电子小肠镜 诊断 克罗恩病
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谷氨酸棒杆菌碱基编辑的条件优化 被引量:5
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作者 李俊维 刘叶 +3 位作者 王钰 郁彭 郑平 王猛 《生物工程学报》 CAS CSCD 北大核心 2020年第1期143-151,共9页
近年来,基于CRISPR/Cas9的碱基编辑技术因其具有不产生DNA双链断裂、无需外源DNA模板、不依赖宿主同源重组修复的优势,已经逐渐发展成为一种强大的基因组编辑工具,在动物、植物、酵母和细菌中得到了开发和应用。研究团队前期已在重要的... 近年来,基于CRISPR/Cas9的碱基编辑技术因其具有不产生DNA双链断裂、无需外源DNA模板、不依赖宿主同源重组修复的优势,已经逐渐发展成为一种强大的基因组编辑工具,在动物、植物、酵母和细菌中得到了开发和应用。研究团队前期已在重要的工业模式菌株谷氨酸棒杆菌中开发了一种多元自动化的碱基编辑技术MACBETH,为进一步优化该方法,提高碱基编辑技术在谷氨酸棒杆菌中的应用效率,本研究首先在谷氨酸棒杆菌中构建了基于绿色荧光蛋白(GFP)的检测系统:将GFP基因的起始密码子ATG人工突变为ACG,GFP无法正常表达,当该密码子的C经编辑后恢复为T,即实现GFP蛋白的复活,结合流式细胞仪分析技术,可快速衡量编辑效率。然后,构建针对靶标位点的碱基编辑工具,经测试,该位点可成功被编辑,在初始编辑条件下碱基编辑效率为(13.11±0.21)%。在此基础上,通过对不同培养基类型、诱导初始OD600、诱导时间、诱导物浓度进行优化,确定最优编辑条件是:培养基为CGXII,初始OD600为0.05,诱导时间为20 h,IPTG浓度为0.01 mmol/L。经过优化,编辑效率达到(30.35±0.75)%,较初始条件提高了1.3倍。最后,选取原编辑条件下编辑效率较低的位点,进行了优化后编辑条件下的编辑效率评估,结果显示,不同的位点在最优编辑条件下的编辑效率提高了1.7–2.5倍,进一步证实该优化条件的有效性及通用性。研究结果为碱基编辑技术在谷氨酸棒杆菌中更好的应用提供了重要的参考价值。 展开更多
关键词 碱基编辑 谷氨酸棒杆菌 CRISPR/Cas系统 编辑条件
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福建省维管植物名录 被引量:18
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作者 安昌 庄怡雪 +3 位作者 郑平 林彦翔 杨成梓 秦源 《生物多样性》 CAS CSCD 北大核心 2023年第6期15-23,共9页
经几代人前赴后继的野外科考和孳孳不息的伏案整理,福建植物多样性调查及保护工作历久弥新。为全面更新和了解福建省维管植物资源的现状,近年来已开展的福建省维管植物多样性相关调查与科考工作成果亟需进一步梳理和呈现。本文在《福建... 经几代人前赴后继的野外科考和孳孳不息的伏案整理,福建植物多样性调查及保护工作历久弥新。为全面更新和了解福建省维管植物资源的现状,近年来已开展的福建省维管植物多样性相关调查与科考工作成果亟需进一步梳理和呈现。本文在《福建植物志》(1982–1995年)的基础上,通过收集文献、考证标本、查阅相关志书及数据库,并结合笔者及众多一线调查工作者的野外调查结果,依照维管植物最新的分类系统(APG IV系统、杨氏系统、PPG I系统)整理出福建省维管植物名录,包含科属信息、中文名、拉丁名、物种的省内分布及数据来源等信息。结果显示,福建省野生、归化及栽培维管植物共计256科1,807属5,587种(其中野生植物231科1,402属4,550种),其中石松类和蕨类植物32科102属414种,裸子植物10科38属76种,被子植物214科1,667属5,097种,较《福建植物志》记载数据新增8科216属1,107种。从数据分析可知,石松类和蕨类植物物种数排列前5位的科为鳞毛蕨科(67种)、水龙骨科(51种)、凤尾蕨科(51种)、金星蕨科(42种)和蹄盖蕨科(38种);裸子植物中物种数最多的科和属分别为柏科(15属25种)和松属(Pinus,14种);被子植物物种数量排列前10位的科分别为禾本科(452种)、豆科(305种)、菊科(279种)、兰科(244种)、莎草科(225种)、蔷薇科(198种)、唇形科(188种)、茜草科(126种)、锦葵科(85种)和樟科(80种),总计2,180个物种,占福建省维管植物物种总数的39.0%;物种数排列前5位的属分别为薹草属(Carex,94种)、悬钩子属(Rubus,58种)、冬青属(Ilex,54种)、刚竹属(Phyllostachys,38种)和蓼属(Persicaria,36种)。本研究旨在后植物志时代对福建省维管植物的物种名录进行修订和更新,进一步完善物种分布概况和标本信息,以期为福建省植物多样性调查、评估及保护,植物学相关学科的发展以及《福建植物志》的再版等提供基础资料。 展开更多
关键词 福建省 维管植物 名录 新种 新分布
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