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Homology Model and Ligand Binding Interactions of the Extracellular Domain of the Human α4β2 Nicotinic Acetylcholine Receptor
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作者 Shu Mao Hui Wen Ng +5 位作者 michael orr Heng Luo Hao Ye Weigong Ge Weida Tong Huixiao Hong 《Journal of Biomedical Science and Engineering》 2016年第1期41-100,共60页
Addiction to nicotine, and possibly other tobacco constituents, is a major factor that contributes to the difficulties smokers face when attempting to quit smoking. Amongst the various subtypes of nicotinic acetylchol... Addiction to nicotine, and possibly other tobacco constituents, is a major factor that contributes to the difficulties smokers face when attempting to quit smoking. Amongst the various subtypes of nicotinic acetylcholine receptors (nAChRs), the α4β2 subtype plays an important role in mediating the addiction process. The characterization of human α4β2-ligand binding interactions provides a molecular framework for understanding ligand-receptor interactions, rendering insights into mechanisms of nicotine addiction and may furnish a tool for efficiently identifying ligands that can bind the nicotine receptor. Therefore, we constructed a homology model of human α4β2 nAChR and performed molecular docking and molecular dynamics (MD) simulations to elucidate the potential human α4β2-ligand binding modes for eleven compounds known to bind to this receptor. Residues V96, L97 and F151 of the α4 subunit and L111, F119 and F121 of the β2 subunit were found to be involved in hydrophobic interactions while residues S153 and W154 of the α4 subunit were involved in the formation of hydrogen bonds between the receptor and respective ligands. The homology model and its eleven ligand-bound structures will be used to develop a virtual screening program for identifying tobacco constituents that are potentially addictive. 展开更多
关键词 Nicotinic Acetylcholine Receptors Homology Model Ligand-Receptor Interactions
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Defining honeybee subspecies in an evolutionary context warrants strategized conservation 被引量:6
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作者 Lifei Qiu Jiangxing Dong +12 位作者 Xingan Li Sajad HParey Ken Tan michael orr Aquib Majeed Xue Zhang Shiqi Luo Xuguo Zhou Chaodong Zhu Ting Ji Qingsheng Niu Shanlin Liu Xin Zhou 《Zoological Research》 SCIE CAS CSCD 2023年第3期483-493,共11页
Despite the urgent need for conservation consideration,strategic action plans for the preservation of the Asian honeybee,Apis cerana Fabricius,1793,remain lacking.Both the convergent and divergent adaptations of this ... Despite the urgent need for conservation consideration,strategic action plans for the preservation of the Asian honeybee,Apis cerana Fabricius,1793,remain lacking.Both the convergent and divergent adaptations of this widespread insect have led to confusing phenotypical traits and inconsistent infraspecific taxonomy.Unclear subspecies boundaries pose a significant challenge to honeybee conservation efforts,as it is difficult to effectively prioritize conservation targets without a clear understanding of subspecies identities.Here,we investigated genome variations in 362 worker bees representing almost all populations of mainland A.cerana to understand how evolution has shaped its population structure.Whole-genome single nucleotide polymorphisms(SNPs)based on nuclear sequences revealed eight putative subspecies,with all seven peripheral subspecies exhibiting mutually exclusive monophyly and distinct genetic divergence from the widespread central subspecies.Our results demonstrated that most classic morphological traits,including body size,were related to the climatic variables of the local habitats and did not reflect the true evolutionary history of the organism.Thus,such morphological traits were not suitable for subspecific delineation.Conversely,wing vein characters showed relative independence to the environment and supported the subspecies boundaries inferred from nuclear genomes.Mitochondrial phylogeny further indicated that the present subspecies structure was a result of multiple waves of population divergence from a common ancestor.Based on our findings,we propose that criteria for subspecies delineation should be based on evolutionary independence,trait distinction,and geographic isolation.We formally defined and described eight subspecies of mainland A.cerana.Elucidation of the evolutionary history and subspecies boundaries enables a customized conservation strategy for both widespread and endemic honeybee conservation units,guiding colony introduction and breeding. 展开更多
关键词 Apis cerana Integrative taxonomy Species concept Pollinator insect Centrifugal diversification Morphology Genomics
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对网络设备测试的挑战和解决方案
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作者 michael orr 《电子产品世界》 2002年第10B期54-56,共3页
关键词 网络设备 测试 功能测试 测试过程
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Intraspecific and interspecific resource partitioning between bumblebee workers and males related to nectar quantity and quality
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作者 Xiao-Fang Jin Zhong-Ming Ye +5 位作者 Yong-Deng He Chun-Feng Yang michael orr Arong Luo Paul Williams Chao-Dong Zhu 《Insect Science》 2025年第3期1047-1060,共14页
Bumblebees are important pollinators for many natural and agricultural systems in temperate regions.Interspecific and intraspecific variation in floral resource preferences have been proposed to influence bumblebee co... Bumblebees are important pollinators for many natural and agricultural systems in temperate regions.Interspecific and intraspecific variation in floral resource preferences have been proposed to influence bumblebee community structure.In particular,sexual dimorphism is a major source of intraspecific niche variation.Although interspecific resource partitioning is well studied,few studies have explored the intraspecific dynamics between workers and males.Here,we report a study on a total of 11528 workers and 2220 males of 14 bumblebee species recorded over 5 years in the Hengduan Mountains of Southwest China.We first compared the potential for interspecific and intraspecific competition between workers and males using visitation records and resource partitioning indices(overlap index).We then evaluated the influence of nectar traits on flower preference,including nectar volume and the levels of hexose,sucrose and 10 essential amino acids(EAAs).We found that the niche overlap between intraspecific workers and males was higher than that between different species,and temporal overlap alone did not strongly determine diet overlap.Males of most species preferred flowers with high levels of EAAs and hexose,whereas workers of some species preferred flowers with high nectar volume and sucrose levels.This study suggests that there is floral resource partitioning among bumblebee species,and between workers and males,which may play a key role in alleviating interspecific and intraspecific competition.These findings also provide a useful guide for which kinds of plants might be most valuable for bumblebees,especially the understudied males,in this biodiversity hotspot. 展开更多
关键词 BUMBLEBEES CASTES male bees nectar traits niche overlap resource partitioning
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Cryptic diversity begets challenges and opportunities in biodiversity research
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作者 Rui CHENG Arong LUO +17 位作者 michael orr Deyan GE Zhong’e HOU Yanhua QU Baocheng GUO Feng ZHANG Zhongli SHA Zhe ZHAO Mingqiang WANG Xiaoyu SHI Hongxiang HAN Qingsong ZHOU Yuanning LI Xingyue LIU Chen SHAO Aibing ZHANG Xin ZHOU Chaodong ZHU 《Integrative Zoology》 2025年第1期33-49,共17页
How many species of life are there on Earth?This is a question that we want to know but cannot yet answer.Some scholars speculate that the number of species may reach 2.2 billion when considering cryptic diversity and... How many species of life are there on Earth?This is a question that we want to know but cannot yet answer.Some scholars speculate that the number of species may reach 2.2 billion when considering cryptic diversity and that each morphology-based insect species may contain an average of 3.1 cryptic species.With nearly two million described species,such high estimates of cryptic diversity would suggest that cryptic species are widespread.The development of molecular species delimitation has led to the discovery of a large number of cryptic species,and cryptic biodiversity has gradually entered ourfield of vision and attracted more attention.This paper introduces the concept of cryptic species,how they evolve,and methods by which they may be discovered and confirmed,and provides theoretical and methodological guidance for the study of hidden species.A workflow of how to confirm cryptic species is provided.In addition,the importance and reliability of multi-evidence-based integrated taxonomy are reaffirmed as a way to better standardize decision-making processes.Special focus on cryptic diversity and increased funding for taxonomy is needed to ensure that cryptic species in hyperdiverse groups are discoverable and described.An increased focus on cryptic species in the future will naturally arise as more difficult groups are studied,and thereby,we mayfinally better understand the rules governing the evolution and maintenance of cryptic biodiversity. 展开更多
关键词 DNA barcoding GENOME integrative taxonomy MORPHOLOGY workflow
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