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棕榈科植物种子内生细菌群落多样性的高通量测序分析 被引量:17
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作者 刘媛 渠露露 +4 位作者 叶美迪 黄曹生 朱月丹 王俏然 李淑彬 《微生物学报》 CAS CSCD 北大核心 2019年第3期554-565,共12页
【目的】探究棕榈科种子内生细菌群落组成及其随物种的差异。【方法】运用MiSeq高通量方法测定蒲葵、棕榈、加拿利海枣、山棕、软叶刺葵、短穗鱼尾葵及三药槟榔7种棕榈科种子内生细菌群落16S rRNA基因V3–V4区序列并进行生物信息学分析... 【目的】探究棕榈科种子内生细菌群落组成及其随物种的差异。【方法】运用MiSeq高通量方法测定蒲葵、棕榈、加拿利海枣、山棕、软叶刺葵、短穗鱼尾葵及三药槟榔7种棕榈科种子内生细菌群落16S rRNA基因V3–V4区序列并进行生物信息学分析。【结果】7种测试种子中获得的V3–V4区有效序列数在2341–40671条之间,聚成97–590个操作分类单元(OTU),Shannon指数计算为1.35–2.94,以加拿利海枣种子最高,山棕种子最低;种群归类结果显示不同种子中测得的各级细菌分类阶层总数及组成不同,总丰度以厚壁菌门的肠球菌属最高,同为厚壁菌门的芽孢杆菌属次之;属级水平上,第一优势细菌属分别为:蒲葵种子(芽孢杆菌属,45.8%),棕榈种子(肠球菌属,51.2%),山棕种子(肠球菌属,12.1%),短穗鱼尾葵种子(肠球菌属,32.6%),三药槟榔种子(肠球菌属,42.9%),软叶刺葵种子(肠球菌属,28.3%),加拿利海枣种子(糖多孢菌属,31.2%)。各种子中次优势细菌属分别为:蒲葵种子(乳球菌属),棕榈、山棕及三药槟榔种子(类芽孢杆菌属),加拿利海枣种子(戈登氏菌属),软叶刺葵和短穗鱼尾葵种子(鞘脂单胞菌属);PICRUST基因预测显示各种子均包含多个与人体器官及人类疾病相关的KEGG功能模块。此外,各种子中均产生了丰度较高的外源物质降解、萜和聚酮合成、多糖合成等有益功能信息。【结论】棕榈科植物种子内生细菌群落多样性较为丰富,群落组成随物种不同而异。各种子内生细菌群体中普遍含多个与人和动物体相关的种群和功能信息,也定殖多种具有益功能性状的细菌类群,值得进一步研究。 展开更多
关键词 棕榈科植物种子 内生细菌 多样性 MiSeq高通量测序
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SARS-CoV-2 triggers inflammatory responses and cell death through caspase-8 activation 被引量:21
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作者 Shufen Li Yulan Zhang +8 位作者 Zhenqiong Guan Huiling Li meidi ye Xi Chen Jun Shen Yiwu Zhou Zheng-Li Shi Peng Zhou Ke Peng 《Signal Transduction and Targeted Therapy》 SCIE CSCD 2020年第1期508-517,共10页
Severe acute respiratory syndrome coronavirus 2(SARS-CoV-2)infection can lead to respiratory illness and multi-organ failure in critically ill patients.Although the virus-induced lung damage and inflammatory cytokine ... Severe acute respiratory syndrome coronavirus 2(SARS-CoV-2)infection can lead to respiratory illness and multi-organ failure in critically ill patients.Although the virus-induced lung damage and inflammatory cytokine storm are believed to be directly associated with coronavirus disease 2019(COVID-19)clinical manifestations,the underlying mechanisms of virus-triggered inflammatory responses are currently unknown.Here we report that SARS-CoV-2 infection activates caspase-8 to trigger cell apoptosis and inflammatory cytokine processing in the lung epithelial cells.The processed inflammatory cytokines are released through the virus-induced necroptosis pathway.Virus-induced apoptosis,necroptosis,and inflammation activation were also observed in the lung sections of SARS-CoV-2-infected HFH4-hACE2 transgenic mouse model,a valid model for studying SARS-CoV-2 pathogenesis.Furthermore,analysis of the postmortem lung sections of fatal COVID-19 patients revealed not only apoptosis and necroptosis but also massive inflammatory cell infiltration,necrotic cell debris,and pulmonary interstitial fibrosis,typical of immune pathogenesis in the lung.The SARS-CoV-2 infection triggered a dual mode of cell death pathways and caspase-8-dependent inflammatory responses may lead to the lung damage in the COVID-19 patients.These discoveries might assist the development of therapeutic strategies to treat COVID-19. 展开更多
关键词 INFLAMMATORY LUNG damage
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