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生物多样性与传染性疾病的关系:进展、挑战与展望 被引量:5
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作者 刘向 陈立范 周淑荣 《生物多样性》 CAS CSCD 北大核心 2020年第11期1376-1390,共15页
在全球生物多样性快速丧失的背景下,理解生物多样性如何影响传染性疾病风险具有重要意义。大量研究表明,宿主多样性对传染性疾病可能存在稀释效应(即疾病风险随宿主生物多样性的增加而降低),但是也有放大效应或者没有影响的证据。本文... 在全球生物多样性快速丧失的背景下,理解生物多样性如何影响传染性疾病风险具有重要意义。大量研究表明,宿主多样性对传染性疾病可能存在稀释效应(即疾病风险随宿主生物多样性的增加而降低),但是也有放大效应或者没有影响的证据。本文首先介绍了关于生物多样性与传染性疾病关系的研究进展,以及该领域的热点研究问题,包括宿主多样性–疾病关系的格局和空间依赖性、稀释效应的体系依赖性和系统发育稀释效应等。随后,介绍了相关研究伴随的争议和批判,主要集中在:稀释效应发生的普遍性、生物多样性–疾病关系实验研究的发表偏好性以及部分疾病生态学家对生物多样性和传染性疾病之间简单数字关系的过分关注。最后指出稀释效应与物种共存、全球变化对稀释效应的影响、进化与稀释效应、稀释效应在政策制定中的应用等领域可能是今后的主要研究方向。 展开更多
关键词 疾病生态学 生态系统服务 放大效应 病原体 宿主 稀释效应
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The CMA Global Atmospheric Reanalysis Version 1.5(CRA1.5)
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作者 Tao ZHANG Zijiang ZHOU +23 位作者 Zhiquan LIU Chunxiang SHI Shuang YAO Lipeng JIANG Yan YAO Zhisen ZHANG Xiao LIANG Zhiqiang ZHANG Junxia GU Jie LIAO Lijuan CAO Hui JIANG Huiying WANG Dongbin ZHANG Zhe chen Fang YUAN Qinglei LI Wenhui XU lifan chen Yani ZHU chen ZHU Shuai DENG Yike ZHOU Shuai SUN 《Journal of Meteorological Research》 2025年第6期1379-1398,共20页
Atmospheric reanalysis is a process that utilizes numerical weather prediction(NWP)models and data assimilation systems to integrate historical meteorological observations,thereby reconstructing datasets that represen... Atmospheric reanalysis is a process that utilizes numerical weather prediction(NWP)models and data assimilation systems to integrate historical meteorological observations,thereby reconstructing datasets that represent past atmospheric states.This paper presents the China Meteorological Administration's(CMA)latest global atmospheric reanalysis product,CRA1.5,which employs the Global Spectral Model(GSM)and the Gridpoint Statistical Interpolation(GSI)Data Assimilation system.CRA1.5 features a model spectral resolution of T_L1534(equivalent to approximately 13 km in horizontal grid spacing),a product time interval of 1 h,a model top at 0.27 hPa,and a hybrid-4DEnVar scheme along with an Ensemble Kalman Filter for data assimilation.The temporal coverage of CRA1.5 extends from 1979 to near real-time.During the reanalysis production,we assimilated a substantial volume of reprocessed satellite data and extensive conventional observations.These observations include dense networks of conventional observations within China(comprising approximately 120 sounding stations and 2400 meteorological stations)as well as satellite observations from China's Fengyun,Haiyang,and Yunyao satellite series.Compared to CRA-40,the rootmean-square error(RMSE)of geopotential height at 500 hPa is reduced by 22.46%,the RMSE of temperature at 200 hPa is reduced by 21.7%,and the RMSE of zonal wind at 850 hPa is reduced by 14.41%.CRA1.5 outperforms ERA5 in 100-m wind speed over China(RMSE:3.21–3.36 m s^(-1)vs.3.46–3.59 m s^(-1))and achieves comparable accuracy to ERA5 in atmospheric precipitable water(RMSE:3.10 mm vs.3.13 mm).CRA1.5's 2-m temperature trend aligns closely with HadCRUT5,capturing global warming accurately.With higher spatiotemporal resolution(0.1°×0.1°,hourly)and advanced assimilation,CRA1.5 provides a critical dataset for climate monitoring,NWP,and AI-based meteorological research.CRA1.5 has been implemented for real-time operation at the CMA.Updates are available up to 6 h after the analysis time,with a final update provided at a 3-day lag. 展开更多
关键词 CMA reanalysis(CRA) observations data assimilation(DA) forecast model
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人工智能算法在药物细胞敏感性预测中的应用 被引量:2
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作者 李叙潼 吴小龙 +7 位作者 万晓喆 钟飞盛 崔晨 陈颖佳 陈立凡 陈凯先 蒋华良 郑明月 《科学通报》 EI CAS CSCD 北大核心 2020年第32期3551-3561,共11页
开发基于癌症患者基因组信息预测有效治疗策略的计算模型是精准医学中的关键挑战.近年来,国际多个组织机构公开了针对数百种细胞系的多层次的基因组表征数据.将这类组学数据与体外肿瘤细胞系的药物细胞敏感性相结合,研究人员可以剖析癌... 开发基于癌症患者基因组信息预测有效治疗策略的计算模型是精准医学中的关键挑战.近年来,国际多个组织机构公开了针对数百种细胞系的多层次的基因组表征数据.将这类组学数据与体外肿瘤细胞系的药物细胞敏感性相结合,研究人员可以剖析癌症治疗药物的分子机制,并将其转化为精准医学所需的个性化诊疗策略.基于大数据的人工智能算法在基因组学与药物响应之间建立了新的桥梁,推进了肿瘤细胞中药物敏感性的预测算法的发展.本文首先对公开的基因组表征数据集进行了总结,随后介绍了基因组表征数据和包括机器学习算法、网络算法和多模态神经网络算法在内的人工智能算法在癌细胞的药物敏感性预测中的应用案例.基于网络的预测方法和多模态深度学习方法有利于实现多组学数据的系统性的整合和应用,能克服传统的机器学习方法在药物响应预测中的局限性,是今后药物敏感性研究的发展方向. 展开更多
关键词 药物敏感性 机器学习 网络 多模态
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Single-base resolution mapping of 2′-O-methylation sites by an exoribonuclease-enriched chemical method 被引量:4
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作者 Ping Zhang Junhong Huang +12 位作者 Wujian Zheng lifan chen Shurong Liu Anrui Liu Jiayi Ye Jie Zhou Zhirong chen Qiaojuan Huang Shun Liu Keren Zhou Lianghu Qu Bin Li Jianhua Yang 《Science China(Life Sciences)》 SCIE CAS CSCD 2023年第4期800-818,共19页
2′-O-methylation(Nm)is one of the most abundant RNA epigenetic modifications and plays a vital role in the post-transcriptional regulation of gene expression.Current Nm mapping approaches are normally limited to high... 2′-O-methylation(Nm)is one of the most abundant RNA epigenetic modifications and plays a vital role in the post-transcriptional regulation of gene expression.Current Nm mapping approaches are normally limited to highly abundant RNAs and have significant technical hurdles in m RNAs or relatively rare non-coding RNAs(nc RNAs).Here,we developed a new method for enriching Nm sites by using RNA exoribonuclease and periodate oxidation reactivity to eliminate 2′-hydroxylated(2′-OH)nucleosides,coupled with sequencing(Nm-REP-seq).We revealed several novel classes of Nm-containing nc RNAs as well as m RNAs in humans,mice,and drosophila.We found that some novel Nm sites are present at fixed positions in different t RNAs and are potential substrates of fibrillarin(FBL)methyltransferase mediated by sno RNAs.Importantly,we discovered,for the first time,that Nm located at the 3′-end of various types of nc RNAs and fragments derived from them.Our approach precisely redefines the genome-wide distribution of Nm and provides new technologies for functional studies of Nm-mediated gene regulation. 展开更多
关键词 2′-O-methylation MgR exoribonuclease periodate oxidation epitranscriptome TRANSCRIPTOME
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A New Globally Reconstructed Sea Surface Temperature Analysis Dataset since 1900 被引量:2
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作者 lifan chen Lijuan CAO +2 位作者 Zijiang ZHOU Dongbin ZHANG Jie LIAO 《Journal of Meteorological Research》 SCIE CSCD 2021年第6期911-925,共15页
A new globally reconstructed sea surface temperature(SST)analysis dataset developed by the China Meteorological Administration(CMA-SST),available on 2°×2°and monthly resolutions since 1900,is described ... A new globally reconstructed sea surface temperature(SST)analysis dataset developed by the China Meteorological Administration(CMA-SST),available on 2°×2°and monthly resolutions since 1900,is described and assessed in this study.The dataset has been constructed from a newly developed integrated dataset with denser and wider sampling of in situ SST observations and follows similar analysis techniques to the Extended Reconstructed SST,version 5(ERSST.v5).Assessments show that the larger observation quantity of the input data source is beneficial to making the reconstructed SSTs more realistic than those reconstructed with ICOADS 3.0+GTS(International Comprehensive Ocean-Atmosphere Dataset 3.0 and Global Telecommunication System),especially in China’s offshore sea area.Besides,a specific parameter for bias correction has been upgraded to be self-adaptive to the input data source,and serves as a mediator to improve the accuracy of the reconstructed SSTs.Generally,the reconstructed CMA-SST dataset is comparable to currently congeneric products.Its biases are similar to those of ERSST.v5,the Centennial Observation-Based Estimates of SST version 2(COBE-SST2),the Hadley Centre Sea Ice and SST dataset version 2(Had ISST2),and the Hadley Centre SST dataset version 3(Had SST3);and more specifically,they are closest to ERSST.v5 and lower than Had ISST2 and Had SST3 at high latitudes of the Southern Hemisphere where in situ observations are limited.Moreover,its temporal characteristics,such as the year-to-year variations of globally averaged SST anomalies and time series of the Nino-3.4,Atlantic multidecadal oscillation,and Pacific decadal oscillation indices are also a good match to those of congeneric products.Although the warming rates of CMA-SST are a little higher in many regions over the periods 1900-2019 and 1950-2019,they are found to be acceptable and within the quantified uncertainties of ERSST.v5.However,there are noticeable differences in the strength and stability of spatial standard deviations among the various datasets,as well as low correlations between CMA-SST and the other products around 60°S where in situ sampling is very limited.These aspects necessitate further investigation and improvement of CMA-SST. 展开更多
关键词 sea surface temperature CMA-SST dataset bias correction reconstruction climate change
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Enterprise WeChat Groups: Their Effect on Work-Life Conflict and Life-Work Enhancement 被引量:3
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作者 Shengming Liu Ye Zhang +2 位作者 lifan chen Li Guo Dongling Yu 《Frontiers of Business Research in China》 2015年第4期516-535,共20页
Social media technologies have made it increasingly feasible for employees to be connected to work. WeChat, a newly emerging social media platform, is widely used in daily life, yet there is still little understanding... Social media technologies have made it increasingly feasible for employees to be connected to work. WeChat, a newly emerging social media platform, is widely used in daily life, yet there is still little understanding of the consequences of the use of WeChat groups in enterprise. Based on boundary theory, we suggested that the use of WeChat groups in enterprise have both pros and cons for employees. We gathered data from an online survey of 202 employees. Results show that posting work-related content in enterprise WeChat groups had a beneficial impact on work for employees but also caused work-life conflict (WLC). However, posting life-related content in enterprise WeChat groups contributes to employees' life-work enhancement (LWE). Contributions and future study directions of these findings are discussed. 展开更多
关键词 social media technology WeChat groups boundary theory work-life conflict life-work enhancement
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Spatiotemporal reflectance blending in a wetland environment 被引量:1
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作者 Ryo Michishita lifan chen +2 位作者 Jin chen Xiaolin Zhu Bing Xu 《International Journal of Digital Earth》 SCIE EI CSCD 2015年第5期364-382,共19页
To understand the mechanism of wetland cover change with both moderate spatial resolution and high temporal frequency,this research evaluates the applicability of a spatiotemporal reflectance blending model in the Poy... To understand the mechanism of wetland cover change with both moderate spatial resolution and high temporal frequency,this research evaluates the applicability of a spatiotemporal reflectance blending model in the Poyang Lake area,China,using 9 time-series Landsat-5 Thematic Mapper images and 18 time-series Terra Moderate Resolution Imaging Spectroradiometer images acquired between July 2004 and November 2005.The customized blending model was developed based on the enhanced spatial and temporal adaptive reflectance fusion model(ESTARFM).Reflectance of the moderate-resolution image pixels on the target dates can be predicted more accurately by the proposed customized model than the original ESTARFM.Water level on the input image acquisition dates strongly affected the accuracy of the blended reflectance.It was found that either of the image sets used as prior or posterior inputs are required when the difference of water level between the prior or posterior date and target date at Poyang Hydrological Station is<2.68 m to achieve blending accuracy with a mean average absolute difference of 4%between the observed and blended reflectance in all spectral bands. 展开更多
关键词 time-series blending model spatial-temporal reflectance MULTI-SENSOR Landsat TM MODIS
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Discovery of ARF1-targeting inhibitor demethylzeylasteral as a potential agent against breast cancer
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作者 Jie Chang Ruirui Yang +11 位作者 lifan chen Zisheng Fan Jingyi Zhou Hao Guo Yinghui Zhang Yadan Liu Guizhen Zhou Keke Zhang Kaixian chen Hualiang Jiang Mingyue Zheng Sulin Zhang 《Acta Pharmaceutica Sinica B》 SCIE CAS CSCD 2022年第5期2619-2622,共4页
To the Editor:ADP-ribosylation factor 1 (ARF1) plays a critical role in regulating vesicle formation and transport1. The dysregulation of ARF1 expression and/or activity is involved in many human cancers, such as brea... To the Editor:ADP-ribosylation factor 1 (ARF1) plays a critical role in regulating vesicle formation and transport1. The dysregulation of ARF1 expression and/or activity is involved in many human cancers, such as breast cancer2,3. Therefore, ARF1 is one of the promising therapeutic targets for cancer treatment. 展开更多
关键词 ADP-ribosylation factor 1 Breast cancer DEMETHYLZEYLASTERAL Virtual screening
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Targeting STING oligomerization with licochalcone D ameliorates STING-driven inflammatory diseases
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作者 Yinghui Zhang Yadan Liu +13 位作者 Bing Jiang lifan chen Jie Hu Buying Niu Jie Chang Zisheng Fan Jingyi Zhou Yajie Wang Dan Teng Ning Ma Xiaofeng Wang Ruirui Yang Mingyue Zheng Sulin Zhang 《Science China(Life Sciences)》 CSCD 2024年第12期2664-2677,共14页
The development of STING inhibitors for the treatment of STING-related inflammatory diseases continues to encounter significant challenges.The activation of STING is a multi-step process that includes binding with c G... The development of STING inhibitors for the treatment of STING-related inflammatory diseases continues to encounter significant challenges.The activation of STING is a multi-step process that includes binding with c GAMP,self-oligomerization,and translocation from the endoplasmic reticulum to the Golgi apparatus,ultimately inducing the expression of IRF3 and NF-κB-mediated interferons and inflammatory cytokines.It has been demonstrated that disruption of any of these steps can effectively inhibit STING activation.Traditional structure-based drug screening methodologies generally focus on specific binding sites.In this study,a Transformer CPI model based on protein primary sequences and independent of binding sites is employed to identify compounds capable of binding to the STING protein.The natural product Licochalcone D(Lico D)is identified as a potent and selective STING inhibitor.Lico D does not bind to the classical ligandbinding pocket;instead,it covalently modifies the Cys148 residue of STING.This modification inhibits STING oligomerization,consequently suppressing the recruitment of TBK1 and the nuclear translocation of IRF3 and NF-κB.Lico D treatment ameliorates the inflammatory phenotype in Trex1-/-mice and inhibits the progression of DSS-induced colitis and AOM/DSS-induced colitis-associated colon cancer(CAC).In summary,this study reveals the potential of Lico D in treating STING-driven inflammatory diseases.It also demonstrates the utility of the Transformer CPI model in discovering allosteric compounds beyond the conventional binding pockets. 展开更多
关键词 cGAS-STING signaling STING inhibitor Transformer CPI model Licochalcone D inflammatory diseases
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