Background:Historically the babblers have been assigned to the family Timaliidae but several recent studies have attempted to rest the taxonomy of this diverse passerine assemblage on a more firm evolutionary footing....Background:Historically the babblers have been assigned to the family Timaliidae but several recent studies have attempted to rest the taxonomy of this diverse passerine assemblage on a more firm evolutionary footing.The result has been a major rearrangement of the group.A well?supported and comprehensive phylogeny for this widespread avian group is an important part of testing evolutionary and biogeographic hypotheses,especially in Asia where the babblers are a key component of many forest ecosystems.However,the genus Liocichla is poorly represented in these prior studies of babbler systematics.Methods:We used a multilocus molecular genetic approach to generate a phylogenetic hypothesis for all five cur?rently recognized species in the avian genus Liocichla.Multilocus DNA sequence data was used to construct individ?ual gene trees using maximum likelihood and species trees were estimated from gene trees using Bayesian analyses.Divergence dates were obtained using a molecular clock approach.Results:Molecular data estimate a probable window of time for the origin for the Liocichla from the mid to late Miocene,between 5.55 and 12.87 Ma.Despite plumage similarities between the insular Taiwan endemic,L.steerii,and the continental L.bugunorum and L.omeiensis,molecular data suggest that L.steerii is the sister taxon to all continen?tal Liocichla.The continental Liocichla are comprised of two lineages;a lineage containing L.omeiensis and L.bugunorum and a lineage comprised of L.phoenicea and L.ripponi.The comparatively early divergence of L.steerii within the Liocichla may be illusory due to extinct and therefore unsampled lineages.L.ripponi and L.phoenicea are parapatric with a Pleistocene split(0.07–1.88 Ma) occurring between an Eastern Himalayan L.phoenicea and a Northern Indo?china distributed L.ripponi.L.bugunorum and L.omeiensis underwent a similar split between the Eastern Himalaya(L.bugunorum) and Central China(L.omeiensis) divided by the Hengduan Mountains.Conclusions:This study supports an origin of the Liocichla occurring sometime prior to the Miocene–Pliocene boundary,a period of significant climatic upheaval in Asia.The biogeographical patterns within the Liocichla mirror those of other birds in the region and allude to common geological and climatic drivers of avian diversification in Asia.展开更多
The globin superfamily,central to oxygen(O_(2))cascade dynamics,exemplifies how canalization—evolutionary stabilization of phenotypic traits—enables vertebrates to thrive in extreme environments.In birds,hemoglobins...The globin superfamily,central to oxygen(O_(2))cascade dynamics,exemplifies how canalization—evolutionary stabilization of phenotypic traits—enables vertebrates to thrive in extreme environments.In birds,hemoglobins(Hbs)serve as a paradigm of this process,with structural and functional canalization underpinning their exceptional aerobic capacity and elevational diversification.Despite significant advances of globins in our understanding of avian aerobic adaptation,a comprehensive synthesis of functional diversity,molecular evolution,and structural innovation is essential to fully elucidate their canalized roles in O_(2)homeostasis.Integrating perspectives on globin functional diversity and structural evolution,this review examines how chance(mutation/fixation biases)and contingency(historical genetic/epistatic constraints)shape Hb divergence and parallelism,thereby bridging molecular mechanisms with physiological adaptation in birds.We highlight how avian Hbs,canalized through compensatory substitutions and allosteric regulation,achieves a balance between evolutionary robustness and adaptive plasticity.However,critical gaps remain persist:the roles of understudied globins(e.g.,neuroglobin,globin E)and the mechanisms of genetic assimilation in migratory taxa.We propose an integrative framework that incorporates ecological divergence(elevation,flight endurance),phylogenetic timescales,and systems biology to unravel how canalization directs adaptive compromise.By focusing on birds within the amniotes,this synthesis advances a cohesive model for vertebrate evolution,wherein canalized globins reconcile metabolic precision with ecological innovation.Ultimately,this review refines hypotheses of O_(2)cascade evolution and calls for cross-disciplinary studies to decode the genetic and physiological architecture underlying adaptive canalization in extreme environments.展开更多
Understanding the genetic diversity–area relationship(GAR)is essential for comprehending how species adapt to environmental changes,as genetic diversity is an indicator of a species’adaptive potential.Variation in e...Understanding the genetic diversity–area relationship(GAR)is essential for comprehending how species adapt to environmental changes,as genetic diversity is an indicator of a species’adaptive potential.Variation in environmental adaptation capacity exists among species and animal taxa with different distribution areas,highlighting the importance of understanding the GAR.To obtain a more comprehensive understanding of the GAR in terrestrial vertebrates,we assessed both haplotype diversity–area and nucleotide diversity–area relationships using 25,453 cytochrome c oxidase subunit I(COI)sequences from 142 amphibian species,574 bird species,and 342 mammal species.We found that both measures of genetic diversity increased with species range size across major animal groups.Nevertheless,the GAR did not differ among animal groups,while haplotype diversity performed better than nucleotide diversity in profiling the GAR,as indicated by higher R2 values.The difference in the modeling fit may stem from the distinct biological and mathematical significance of nucleotide diversity and haplotype diversity.These results suggest that the GAR follows similar rules among different animal taxa.Furthermore,haplotype diversity may serve as a more reliable indicator for assessing the potential effects of area size changes on animal populations and provide better guidance for conserving genetic diversity.展开更多
Understanding migration patterns and spatial connectivity is crucial for conserving long-distance migratory birds. While satellite telemetry has advanced the study of large gulls, Pallas's Gull (Ichthyaetus ichthy...Understanding migration patterns and spatial connectivity is crucial for conserving long-distance migratory birds. While satellite telemetry has advanced the study of large gulls, Pallas's Gull (Ichthyaetus ichthyaetus) remains relatively understudied, with limited data on its migration routes and habitat use, particularly in Central Asia. This study integrates 684 ring recoveries (1968–2024) and GPS tracking data to analyze the migration ecology of individuals breeding at Alakol Lake, Kazakhstan. Ring recoveries confirm migratory connectivity across Kazakhstan, Russia, Uzbekistan, Turkmenistan, Iran, and Pakistan, with wintering records as far as India, Kuwait, Bangladesh, and Ethiopia. GPS tracking of a single individual (June 2020–August 2021) revealed a migration route from Alakol Lake to the Arabian Sea, with key stopovers at Zaisan Lake, Balkhash Lake, the Aral Sea, Aydar Lake, and the Amu Darya River. Notably, a post-breeding northward dispersal to Zaisan Lake and southern Russia was identified before the southward migration commenced. These findings highlight the significance of Kazakhstan's lakes as breeding and migratory hubs and the need to protect critical stopover sites in Central Asia. Given increasing anthropogenic pressures on wetland habitats, this research provides essential baseline data for conservation planning and enhances the broader understanding of gull migration ecology.展开更多
A novel Clade 2.3.2.1c H5N1 reassortant virus caused several outbreaks in wild birds in some regions of China from late 2014 to 2015.Based on the genetic and phylogenetic analyses,the viruses possess a stable gene con...A novel Clade 2.3.2.1c H5N1 reassortant virus caused several outbreaks in wild birds in some regions of China from late 2014 to 2015.Based on the genetic and phylogenetic analyses,the viruses possess a stable gene constellation with a Clade 2.3.2.1c HA,a H9N2-derived PB2 gene and the other six genes of Asian H5N1-origin.The Clade 2.3.2.1c H5N1 reassortants displayed a high genetic relationship to a human H5N1 strain(A/Alberta/01/2014).Further analysis showed that similar viruses have been circulating in wild birds in China,Russia,Dubai(Western Asia),Bulgaria and Romania(Europe),as well as domestic poultry in some regions of Africa.The affected areas include the Central Asian,East Asian-Australasian,West Asian-East African,and Black Sea/Mediterranean flyways.These results show that the novel Clade 2.3.2.1c reassortant viruses are circulating worldwide and may have gained a selective advantage in migratory birds,thus posing a serious threat to wild birds and potentially humans.展开更多
Incomplete lineage sorting and introgression are 2 major and nonexclusive causes of specieslevel non-monophyly.Distinguishing between these 2 processes is notoriously difficult because they can generate similar geneti...Incomplete lineage sorting and introgression are 2 major and nonexclusive causes of specieslevel non-monophyly.Distinguishing between these 2 processes is notoriously difficult because they can generate similar genetic signatures.Previous studies have suggested that 2 closely related duck species,the Chinese spot-billed duck Anas zonorhyncha and the mallard A.platyrhynchosvjere polyphyletically intermixed.Here,we utilized a wide geographical sampling,multilocus data and a coalescent-based model to revisit this system.Our study confirms the finding that Chinese spot-billed ducks and Mallards are not monophyletic.There was no apparent interspecific differentiation across loci except those at the mitochondrial DNA(mtDNA)control region and the Z chromosome(CHD1Z).Based on an isolation-with-migration model and the geographical distribution of lineages,we suggest that both introgression and incomplete lineage sorting might contribute to the observed non-monophyly of the 2 closely related duck species.The mtDNA introgression was asymmetric,with high gene flow from Chinese spot-billed ducks to Mallards and negligible gene flow in the opposite direction.Given that the 2 duck species are phenotypically distinctive but weakly genetically differentiated,future work based on genomescale data is necessary to uncover genomic regions that are involved in divergence,and this work may provide further insights into the evolutionary histories of the 2 species and other waterfowls.展开更多
Background: Geographic variation in body size is assumed to reflect adaptation to local environmental conditions. Although Bergmann's rule is usually sufficient to explain such variation in homeotherms, some excep...Background: Geographic variation in body size is assumed to reflect adaptation to local environmental conditions. Although Bergmann's rule is usually sufficient to explain such variation in homeotherms, some exceptions have been documented. The relationship between altitude, latitude and body size, has been well documented for some vertebrate taxa during the past decades. However, relatively little information is available on the effects of climate variables on body size in birds.Methods: We collected the data of 267 adult Eurasian Tree Sparrow(Passer montanus) specimens sampled at 48 localities in China's mainland, and further investigated the relationships between two response variables, body mass and wing length, as well as a suit of explanatory variables, i.e. altitude, latitude, mean annual temperature(MAT), annual precipitation(PRC), annual sunshine hours(SUN), average annual wind speed(WS), air pressure(AP) and relative humidity(RH).Results: Our study showed that(1) although the sexes did not differ significantly in body mass, males had longer wings than females;(2) body mass and wing length were positively correlated with altitude but not with latitude;(3) body mass and wing length were negatively correlated with AP and RH, but not significantly correlated with WS. Body mass was positively correlated with SUN and inversely correlated with MAT. Wing length was not correlated with MAT in either sex, but was positively correlated with SUN and negatively correlated with PRC in male sparrows;(4) variation in body mass could be best explained by AP and SUN, whereas variation in wing length could be explained by RH and AP in both sexes. In addition, variation in male sparrows can be explained by SUN, WS and PRC but not in females.Conclusions: Two different proxies of body size, body mass and wing length, correlated with same geographic factors and different climate factors. These differences may reflect selection for heat conservation in the case of body mass, and for efficient flight in the case of wing length.展开更多
Gene flow and demographic history can play important roles in the adaptive genetic differentiation of species, which is rarely understood in the high-altitude adaptive evolution of birds. To elucidate genetic divergen...Gene flow and demographic history can play important roles in the adaptive genetic differentiation of species, which is rarely understood in the high-altitude adaptive evolution of birds. To elucidate genetic divergence of populations in the great tit complex （Parus major, P. minor and P. cinereus） at different elevations, we compared the genetic structure and gene flow in hemoglobin genes with neutral loci. Our results revealed the elevationally divergent structure of αA-globin gene, distinctive from that of the/βA-globin gene and neutral loci. We further investigated gene flow patterns among the populations in the central-northern （〉 1,000 m a.s.l.）, south-eastern （〈 1,000 m a.s.l.） regions and the Southwest Mountains （〉2,000 m a.s.l.） in China. The high-altitude （〉 1,000 m a.s.l.） diverged aA-globin genetic structure coincidαed with higher αA-globin gene flow between highland populations, in contrast to restricted neutral gene flow concordant with the phylogeny. The higher aA-globin gene flow suggests the possibility of adaptive evolution during population divergence, contrary to the lower aA-globin gene flow homogenized by neutral loci during population expantion. In concordance with patterns of historical gene flow, genotypic and allelic profiles provide distinctive patterns of fixation in different high-altitude populations. The fixation of alleles at contrasting elevations may primarily due to highland standing variants aA49Asn/72Asn/108Ala originating from the south-western population. Our findings demonstrate a pattern of genetic divergence with gene flow in major hemoglobin genes depending on population demographic history.展开更多
Background: The Russet Bush Warbler Locustella(previously Bradypterus) mandelli complex occurs in mountains in the eastern Himalayas, southern China, Vietnam, the Philippines, and Indonesia. The taxonomy has been deba...Background: The Russet Bush Warbler Locustella(previously Bradypterus) mandelli complex occurs in mountains in the eastern Himalayas, southern China, Vietnam, the Philippines, and Indonesia. The taxonomy has been debated,with one(L. seebohmi) to four(L. seebohmi, L. mandelli, L. montis and L. timorensis) species having been recognised.Methods: We used an integrative approach, incorporating analyses of morphology, vocalizations and a molecular marker, to re-evaluate species limits in the L. mandelli complex.Results: We found that central Chinese L. mandelli differed from those from India through northern Southeast Asia to southeast China in plumage, morphometrics and song. All were easily classified by song, and(wing + culmen)/tail ratio overlapped only marginally. Both groups were reciprocally monophyletic in a mitochondrial cytochrome b(cytb) gene tree, with a mean divergence of 1.0 ± 0.2%. They were sympatric and mostly altitudinally segregated in the breeding season in southern Sichuan province. We found that the Mt Victoria(western Myanmar) population differed vocally from other L. mandelli, but no specimens are available. Taiwan Bush Warbler L. alishanensis was sister to the L. mandelli complex, with the most divergent song. Plumage, vocal and cytb evidence supported the distinctness of the south Vietnamese L. mandelli idonea. The Timor Bush Warbler L. timorensis, Javan Bush Warbler L.montis and Benguet Bush Warbler L. seebohmi differed distinctly in plumage, but among-population song variation in L. montis exceeded the differences between some populations of these taxa, and mean pairwise cytb divergences were only 0.5–0.9%. We also found that some L. montis populations differed morphologically.Conclusions: We conclude that the central Chinese population of Russet Bush Warbler represents a new species,which we describe herein, breeding at mid elevations in Sichuan, Shaanxi, Hubei, Hunan and Guizhou provinces.The taxonomic status of the other allopatric populations is less clear. However, as they differ to a degree comparable with that of the sympatric L. mandelli and the new species, we elevate L. idonea to species status, and retain L. seebohmi and L. montis as separate species, the latter with timorensis as a subspecies. Further research should focus on different populations of L. montis and the Mt Victoria population of L. mandelli.展开更多
Large-scale patterns of species richness have gained much attention in recent years; however, the factors that drive high species richness are still controversial in local regions, especially in highly diversified mon...Large-scale patterns of species richness have gained much attention in recent years; however, the factors that drive high species richness are still controversial in local regions, especially in highly diversified montane regions. The Qinghai-Tibetan Plateau （QTP） and the surrounding mountains are biodiversity hot spots due to a high number of endemic montane species. Here, we explored the fac- tors underlying this high level of diversity by studying the relationship between species richness and environmental variables. The richness patterns of 758 resident bird species were summarized at the scale of 1°× 1° grid cell at different taxonomic levels （order, family, genus, and species） and in differ- ent taxonomic groups （Passeriformes, Galliformes, Falconiformes, and Columbiformes）. These rich- ness patterns were subsequently analyzed against habitat heterogeneity （topographical heterogen- eity and land cover）, temperature amplitude （annual temperature, annual precipitation, precipitation seasonality, and temperature seasonality） and a vegetation index （net primary productivity）. Our re- sults showed that the highest richness was found in the southeastern part of the QTP, the eastern Himalayas. The lowest richness was observed in the central plateau of the QTP. Topographical het- erogeneity and temperature amplitude are the primary factors that explain overall patterns of species richness in the QTP, although the specific effect of each environmental variable varies between the different taxonomic groups depending on their own evolutionary histories and ecological require- ments. High species richness in the southeastern QTP is mostly due to highly diversified habitat types and temperature zones along elevation gradients, whereas the low species richness in the cen- tral plateau of the QTP may be due to environmental and energetic constraints, as the central plateau is harsh environment.展开更多
Why do taxonomists matter? The work of taxonomists is often understated if not completely misunderstood. Without taxonomists, organisms cannot be accurately identified, neither can these organisms be given universally...Why do taxonomists matter? The work of taxonomists is often understated if not completely misunderstood. Without taxonomists, organisms cannot be accurately identified, neither can these organisms be given universally accepted names, and reliably positioned in the phylogenetic tree of life. Thanks to the work of taxonomists over the last 269 years since Carl Linnaeus established the binomial system, we can now measure the health and wealth of our biodiversity in a refined, science-based inventory prescribed by stringent nomenclatural rules.展开更多
Background: The Plain-backed Thrush Zoothera mollissima breeds in the Himalayas and mountains of central China. It was long considered conspecific with the Long-tailed Thrush Zoothera dixoni, until these were shown to...Background: The Plain-backed Thrush Zoothera mollissima breeds in the Himalayas and mountains of central China. It was long considered conspecific with the Long-tailed Thrush Zoothera dixoni, until these were shown to be broadly sympatric.Methods: We revise the Z. mollissima–Z. dixoni complex by integrating morphological, acoustic, genetic(two mitochondrial and two nuclear markers), ecological and distributional datasets.Results: In earlier field observations, we noted two very different song types of "Plain-backed" Thrush segregated by breeding habitat and elevation. Further integrative analyses congruently identify three groups: an alpine breeder in the Himalayas and Sichuan, China("Alpine Thrush"); a forest breeder in the eastern Himalayas and northwest Yunnan(at least), China("Himalayan Forest Thrush"); and a forest breeder in central Sichuan("Sichuan Forest Thrush"). Alpine and Himalayan Forest Thrushes are broadly sympatric, but segregated by habitat and altitude, and the same is probably true also for Alpine and Sichuan Forest Thrushes. These three groups differ markedly in morphology and songs. In addition, DNA sequence data from three non-breeding specimens from Yunnan indicate that yet another lineage exists("Yunnan Thrush"). However, we find no consistent morphological differences from Alpine Thrush, and its breeding range is unknown. Molecular phylogenetic analyses suggest that all four groups diverged at least a few million years ago, and identify Alpine Thrush and the putative "Yunnan Thrush" as sisters, and the two forest taxa as sisters. Cytochrome b divergences among the four Z. mollissima sensu lato(s.l.) clades are similar to those between any of them and Z. dixoni, and exceed that between the two congeneric outgroup species. We lectotypify the name Oreocincla rostrata Hodgson, 1845 with the Z. mollissima sensu stricto(s.s.) specimen long considered its type. No available name unambiguously pertains to the Himalayan Forest Thrush.Conclusions: The Plain-backed Thrush Z. mollissima s.l. comprises at least three species: Alpine Thrush Z. mollissima s.s., with a widespread alpine breeding distribution; Sichuan Forest Thrush Z. griseiceps, breeding in central Sichuan forests; and Himalayan Forest Thrush, breeding in the eastern Himalayas and northwest Yunnan(at least), which is described herein as a new species. "Yunnan Thrush" requires further study.展开更多
Genetic diversity is one of the three dimensions of biodiversity and fundamental to various life forms on the Earth.Understanding the distribution pattern of genetic diversity and its driving forces has been an import...Genetic diversity is one of the three dimensions of biodiversity and fundamental to various life forms on the Earth.Understanding the distribution pattern of genetic diversity and its driving forces has been an important topic in ecology,biogeography and conservation biology since the last decade.We investigated the genetic diversity pattern of passerine birds in the Mountains of Southwest China,a global biodiversity hotspot with the highest species richness of birds in the entire Eurasia,and explored the influencing forces of environmental variables on genetic diversity.We compiled 1189 Cytochrome b sequences of 27 passerine species from 152 geographic sites,covering the range of Mountains of Southwest China and its adjoining areas.We generated genetic diversity distribution maps using a grid-cell method based on nucleotide diversity and haplotype diversity indices.We further analyzed the variation pattern of the two indices along latitudinal,longitudinal,and elevational gradients.The correlations between the two indices and environmental variables were also evaluated.The nucleotide diversity hotspots were mostly located in the southern Hengduan Mountains,while for haplotype diversity,three hotspots were detected:the southeast edge of the Qinghai-Tibetan Plateau,the southern Hengduan Mountains and the Qinling Mountains.There was no monotonic increasing or decreasing pattern in nucleotide diversity or haplotype diversity along latitudinal,longitudinal or elevational gradients except for altitudinal range.Correlation and model selection analyses detected multiple environmental variables in driving genetic diversity patterns,including temperature,precipitation,vegetation,human influence,longitude and altitude range.Similar to the pattern of species richness,the nucleotide diversity pattern of passerine birds in the Mountains of Southwest China presents a decreasing trend from southwest to northeast,while the haplotype diversity pattern is more likely decreased from west to east.Our results indicate that the distribution pattern of genetic diversity may be derived from the complex topography and diverse microclimates in the Mountains of Southwest China.展开更多
Background: The White-browed Shortwing(Brachypteryx montana) is widespread from the central Himalayas to the southeast Chinese mainland and the island of Taiwan, the Philippines and Indonesia. Multiple subspecies are ...Background: The White-browed Shortwing(Brachypteryx montana) is widespread from the central Himalayas to the southeast Chinese mainland and the island of Taiwan, the Philippines and Indonesia. Multiple subspecies are recognised, and several of these have recently been suggested to be treated as separate species based on differences in morphology and songs.Methods: We here analyse plumage, morphometrics, songs, two mitochondrial and two nuclear markers, and geographical distributions of the two mainland Asian taxa B. m. cruralis and B. m. sinensis and the Taiwan Residents B. m. goodfellowi.Results: We conclude that these differ congruently in morphology, songs and DNA. Male B. m. goodfellowi is the most divergent in plumage(sexually monomorphic, unlike the two others; male similar to female), and B. m. cruralis and B. m. sinensis differ in male plumage maturation. The song of B. m. cruralis is strongly divergent from the others, whereas the songs of B. m. sinensis and B. m. goodfellowi are more similar to each other. Brachypteryx m. sinensis and B. m. goodfellowi are sisters, with an estimated divergence time 4.1 million years ago(mya; 95% highest posterior distribution [HPD] 2.8–5.5 mya), and B. m. cruralis separated from these two 5.8 mya(95% HPD 4.1–7.5 mya). We also report notable range extensions of B. m. sinensis as well as sympatry between this taxon and B. m. cruralis in Sichuan Province, China. Brachypteryx m. montana from Java is found to be more closely related to Lesser Shortwing(B. leucophris) and Rusty-bellied Shortwing(B. hyperythra) than to the mainland Asian and Taiwan Residents taxa.Conclusion: Our data support a recent proposal to treat the three mainland Asian and Taiwan Residents taxa as three species, separate from B. montana sensu stricto: B. cruralis(central Himalayas to south central China and south Vietnam), B. sinensis(north central to southeastern part of China's Mainland) and B. goodfellowi(Taiwan Island).展开更多
An emerging paradigm in analysis of geographic differentiation and speciation is integration of phylogeographic analyses and paleo-distributional projections to gain insight into these complex historical processes （P...An emerging paradigm in analysis of geographic differentiation and speciation is integration of phylogeographic analyses and paleo-distributional projections to gain insight into these complex historical processes （Peterson, 2009）. This approach hinges on the idea of a relatively stable landscape,展开更多
With the continued development of tracking technology and increasing interest in animal movement,our understanding of migration behavior has become more comprehensive.However,there are still many species that have not...With the continued development of tracking technology and increasing interest in animal movement,our understanding of migration behavior has become more comprehensive.However,there are still many species that have not been well studied,particularly sea birds.Here,we present the first year-round Global Positioning System(GPS)tracking data of the Black-tailed Gull(Larus crassirostris)at the population level.We used solar-powered GPS-Global System for Mobile communication(GSM)loggers to successfully track 30 individuals breeding at Xingrentuo Islet,Liaoning Province,China,for 1-3 years.Except for one individual who roamed in the far north of the Yellow Sea during non-breeding period,all others did a directed southward migration.Migration routes and wintering sites differed among migrating gulls and between years for the birds tracked for two or more years.Additionally,during wintering,the migrating gulls were more likely to travel over a large body of water and shift sites,and some trajectories were quite complex,which was probably closely related to what we observed in the field about their boat-chasing behavior.Compared to wintering movements,the post-breeding movements ranged over a smaller area.Specifically,almost all of them had a long post-breeding period near the breeding islet(≥120days,<220 km from the breeding islet),and 80%of the gulls who were tracked more than one year had at least one faithful post-breeding site.Compared to the post-breeding period,only approximately half of the migrating gulls had a pre-breeding period that was shorter(3-20 days)and closer to the breeding islet(≤80 km).Migration distance varied among migrating gulls(range 209-2405 km)and the gulls moved least distance during postbreeding period.Furthermore,we found that the southward movement of the migrating gulls occurred when the temperature near the breeding islet dropped;specifically,the gulls directly migrated southward away from the post-breeding site.Our results suggest that the Black-tailed Gull has a long post-breeding period but a short prebreeding period near the breeding islet and high diversity of their migrating patterns(in especial migration routes and wintering sites).展开更多
The avifauna in Tajikistan has been widely studied for the last century,but specific work on species richness pattern along elevation gradients in Tajikistan is rarely investigated.Here,we reported the first study of ...The avifauna in Tajikistan has been widely studied for the last century,but specific work on species richness pattern along elevation gradients in Tajikistan is rarely investigated.Here,we reported the first study of bird species richness(BSR)in the high-altitude mountain systems(Tien Shan and Pamir-Alay)of Tajikistan which are very sensitive to the recent climate changes.We aim to explore the relationship of BSR pattern with elevation gradient and to determine the potential drivers underlying the patterns.We collected occurrence data from field surveys,published articles,and open access websites to compile a list of bird species along elevational gradients across the whole country.The BSR was counted by 100 m elevational bands ranging from 294 m to 5146 m.The patterns of BSR were calculated separately for five groups:all breeding birds,Passeriformes,Non-Passeriformes,large elevational range species,and small elevational range species.We calculated ecological and climatic factors of planimetric area,mid-domain effect(MDE),habitat heterogeneity(HH),mean annual temperature(MAT),temperature annual range(TAR),annual precipitation(AP),normalized difference vegetation index(NDVI),human influence index(HII),and human disturbance(HD)in each elevational band.A combination of polynomial regression,Pearson’s correlation,and general least squares model analyses were used to test the effects of these factors on the BSR.A unimodal distribution pattern with a peak at 750-1950 m was observed for all breeding birds.The similar pattern was explored for Passeriformes and Non-Passeriformes,while species with different elevational range sizes had different shapes and peak elevations.For all the breeding birds and Passeriformes,BSR was significantly related to spatial,climate and human influence factors,while BSR of Non-Passeriformes positively correlated with all the given factors.First,second and fourth range classes of birds were significantly correlated with human influence factors.Moreover,large-ranged species had positive correlations with the middomain effect and weakly with habitat heterogeneity.We found that area,MAT and AP were the main factors to explain the richness pattern of birds,and the species richness increases with these three factors increasing.Multiple factors such as area and climate explain 84%of the variation in richness.Bivariate and multiple regression analyses revealed a consistent influence of spatial and climate factors in shaping the richness pattern for nearly all bird groups.展开更多
基金Support was provided by a National Science Foundation(NSF)Major Research Instrumentation award(DBI-0821703)to HLMRoger Fry and Len Weakley through the Helen B.Vogel Charitable Trust and the Mary Jane Helms Charitable Trust to HLM and Deutsche Forschungsgemeinschaft to DTT(Ti 679/1-1)
文摘Background:Historically the babblers have been assigned to the family Timaliidae but several recent studies have attempted to rest the taxonomy of this diverse passerine assemblage on a more firm evolutionary footing.The result has been a major rearrangement of the group.A well?supported and comprehensive phylogeny for this widespread avian group is an important part of testing evolutionary and biogeographic hypotheses,especially in Asia where the babblers are a key component of many forest ecosystems.However,the genus Liocichla is poorly represented in these prior studies of babbler systematics.Methods:We used a multilocus molecular genetic approach to generate a phylogenetic hypothesis for all five cur?rently recognized species in the avian genus Liocichla.Multilocus DNA sequence data was used to construct individ?ual gene trees using maximum likelihood and species trees were estimated from gene trees using Bayesian analyses.Divergence dates were obtained using a molecular clock approach.Results:Molecular data estimate a probable window of time for the origin for the Liocichla from the mid to late Miocene,between 5.55 and 12.87 Ma.Despite plumage similarities between the insular Taiwan endemic,L.steerii,and the continental L.bugunorum and L.omeiensis,molecular data suggest that L.steerii is the sister taxon to all continen?tal Liocichla.The continental Liocichla are comprised of two lineages;a lineage containing L.omeiensis and L.bugunorum and a lineage comprised of L.phoenicea and L.ripponi.The comparatively early divergence of L.steerii within the Liocichla may be illusory due to extinct and therefore unsampled lineages.L.ripponi and L.phoenicea are parapatric with a Pleistocene split(0.07–1.88 Ma) occurring between an Eastern Himalayan L.phoenicea and a Northern Indo?china distributed L.ripponi.L.bugunorum and L.omeiensis underwent a similar split between the Eastern Himalaya(L.bugunorum) and Central China(L.omeiensis) divided by the Hengduan Mountains.Conclusions:This study supports an origin of the Liocichla occurring sometime prior to the Miocene–Pliocene boundary,a period of significant climatic upheaval in Asia.The biogeographical patterns within the Liocichla mirror those of other birds in the region and allude to common geological and climatic drivers of avian diversification in Asia.
基金supported by the National Natural Science Foundation of China(NSFC 31900313)to X.Z.the Central guide local science and technology development funds(XZ202301YD0007C)to L.Y.+1 种基金NSFC(32471572)National Key Research and Development Program of China(2024YFC2310303)to D.L。
文摘The globin superfamily,central to oxygen(O_(2))cascade dynamics,exemplifies how canalization—evolutionary stabilization of phenotypic traits—enables vertebrates to thrive in extreme environments.In birds,hemoglobins(Hbs)serve as a paradigm of this process,with structural and functional canalization underpinning their exceptional aerobic capacity and elevational diversification.Despite significant advances of globins in our understanding of avian aerobic adaptation,a comprehensive synthesis of functional diversity,molecular evolution,and structural innovation is essential to fully elucidate their canalized roles in O_(2)homeostasis.Integrating perspectives on globin functional diversity and structural evolution,this review examines how chance(mutation/fixation biases)and contingency(historical genetic/epistatic constraints)shape Hb divergence and parallelism,thereby bridging molecular mechanisms with physiological adaptation in birds.We highlight how avian Hbs,canalized through compensatory substitutions and allosteric regulation,achieves a balance between evolutionary robustness and adaptive plasticity.However,critical gaps remain persist:the roles of understudied globins(e.g.,neuroglobin,globin E)and the mechanisms of genetic assimilation in migratory taxa.We propose an integrative framework that incorporates ecological divergence(elevation,flight endurance),phylogenetic timescales,and systems biology to unravel how canalization directs adaptive compromise.By focusing on birds within the amniotes,this synthesis advances a cohesive model for vertebrate evolution,wherein canalized globins reconcile metabolic precision with ecological innovation.Ultimately,this review refines hypotheses of O_(2)cascade evolution and calls for cross-disciplinary studies to decode the genetic and physiological architecture underlying adaptive canalization in extreme environments.
基金supported by the National Natural Science Foundation of China(32130013,32070434)the National Key Research and Development Program of China(2022YFC2601601)+1 种基金the Second Tibetan Plateau Scientific Expedition and Research(STEP)program(2019QZKK05010112,2019QZKK0304-02)Hainan Tropical Rainforest Conservation Research Project,ZDYF2023RDYL01(supported by the Hainan Institute of National Park,HINP,KY-24ZK02).
文摘Understanding the genetic diversity–area relationship(GAR)is essential for comprehending how species adapt to environmental changes,as genetic diversity is an indicator of a species’adaptive potential.Variation in environmental adaptation capacity exists among species and animal taxa with different distribution areas,highlighting the importance of understanding the GAR.To obtain a more comprehensive understanding of the GAR in terrestrial vertebrates,we assessed both haplotype diversity–area and nucleotide diversity–area relationships using 25,453 cytochrome c oxidase subunit I(COI)sequences from 142 amphibian species,574 bird species,and 342 mammal species.We found that both measures of genetic diversity increased with species range size across major animal groups.Nevertheless,the GAR did not differ among animal groups,while haplotype diversity performed better than nucleotide diversity in profiling the GAR,as indicated by higher R2 values.The difference in the modeling fit may stem from the distinct biological and mathematical significance of nucleotide diversity and haplotype diversity.These results suggest that the GAR follows similar rules among different animal taxa.Furthermore,haplotype diversity may serve as a more reliable indicator for assessing the potential effects of area size changes on animal populations and provide better guidance for conserving genetic diversity.
基金funded by the Ministry of Science and Higher Education of the Republic of Kazakhstan,the Scientific Program BR21882199–Cadastre of wild animals of arid territories of the Balkhash-Alakol basin with an assessment of threats for their conservation and sustainable use.
文摘Understanding migration patterns and spatial connectivity is crucial for conserving long-distance migratory birds. While satellite telemetry has advanced the study of large gulls, Pallas's Gull (Ichthyaetus ichthyaetus) remains relatively understudied, with limited data on its migration routes and habitat use, particularly in Central Asia. This study integrates 684 ring recoveries (1968–2024) and GPS tracking data to analyze the migration ecology of individuals breeding at Alakol Lake, Kazakhstan. Ring recoveries confirm migratory connectivity across Kazakhstan, Russia, Uzbekistan, Turkmenistan, Iran, and Pakistan, with wintering records as far as India, Kuwait, Bangladesh, and Ethiopia. GPS tracking of a single individual (June 2020–August 2021) revealed a migration route from Alakol Lake to the Arabian Sea, with key stopovers at Zaisan Lake, Balkhash Lake, the Aral Sea, Aydar Lake, and the Amu Darya River. Notably, a post-breeding northward dispersal to Zaisan Lake and southern Russia was identified before the southward migration commenced. These findings highlight the significance of Kazakhstan's lakes as breeding and migratory hubs and the need to protect critical stopover sites in Central Asia. Given increasing anthropogenic pressures on wetland habitats, this research provides essential baseline data for conservation planning and enhances the broader understanding of gull migration ecology.
基金supported by grants from the National Natural Science Foundation of China (31311120063,81470096,31570026,31471253)the Ministry of Education and Science of the Russian Federation (Chinese-Russian project:RFMEFI61315X0045)+3 种基金the intramural special grant for influenza virus research from the Chinese Academy of Sciences (KJZD-EW-L09)the IDRCAPEIR program (106915-001)Special Project of Ministry of Science and Technology (2013FY113500)supported by the “Taishan Scholar” project of Shandong Province
文摘A novel Clade 2.3.2.1c H5N1 reassortant virus caused several outbreaks in wild birds in some regions of China from late 2014 to 2015.Based on the genetic and phylogenetic analyses,the viruses possess a stable gene constellation with a Clade 2.3.2.1c HA,a H9N2-derived PB2 gene and the other six genes of Asian H5N1-origin.The Clade 2.3.2.1c H5N1 reassortants displayed a high genetic relationship to a human H5N1 strain(A/Alberta/01/2014).Further analysis showed that similar viruses have been circulating in wild birds in China,Russia,Dubai(Western Asia),Bulgaria and Romania(Europe),as well as domestic poultry in some regions of Africa.The affected areas include the Central Asian,East Asian-Australasian,West Asian-East African,and Black Sea/Mediterranean flyways.These results show that the novel Clade 2.3.2.1c reassortant viruses are circulating worldwide and may have gained a selective advantage in migratory birds,thus posing a serious threat to wild birds and potentially humans.
基金the National Natural Science Foundation of China(No.31401969,31772480)the Natural Science Foundation of Jiangxi Province(No.20161BAB214158).
文摘Incomplete lineage sorting and introgression are 2 major and nonexclusive causes of specieslevel non-monophyly.Distinguishing between these 2 processes is notoriously difficult because they can generate similar genetic signatures.Previous studies have suggested that 2 closely related duck species,the Chinese spot-billed duck Anas zonorhyncha and the mallard A.platyrhynchosvjere polyphyletically intermixed.Here,we utilized a wide geographical sampling,multilocus data and a coalescent-based model to revisit this system.Our study confirms the finding that Chinese spot-billed ducks and Mallards are not monophyletic.There was no apparent interspecific differentiation across loci except those at the mitochondrial DNA(mtDNA)control region and the Z chromosome(CHD1Z).Based on an isolation-with-migration model and the geographical distribution of lineages,we suggest that both introgression and incomplete lineage sorting might contribute to the observed non-monophyly of the 2 closely related duck species.The mtDNA introgression was asymmetric,with high gene flow from Chinese spot-billed ducks to Mallards and negligible gene flow in the opposite direction.Given that the 2 duck species are phenotypically distinctive but weakly genetically differentiated,future work based on genomescale data is necessary to uncover genomic regions that are involved in divergence,and this work may provide further insights into the evolutionary histories of the 2 species and other waterfowls.
基金supported by grants from the National Natural Science Foundation of China (NSFC, 31330073, 31672292)the Natural Science Foundation of the Department of Education, Hebei Province (YQ2014024)
文摘Background: Geographic variation in body size is assumed to reflect adaptation to local environmental conditions. Although Bergmann's rule is usually sufficient to explain such variation in homeotherms, some exceptions have been documented. The relationship between altitude, latitude and body size, has been well documented for some vertebrate taxa during the past decades. However, relatively little information is available on the effects of climate variables on body size in birds.Methods: We collected the data of 267 adult Eurasian Tree Sparrow(Passer montanus) specimens sampled at 48 localities in China's mainland, and further investigated the relationships between two response variables, body mass and wing length, as well as a suit of explanatory variables, i.e. altitude, latitude, mean annual temperature(MAT), annual precipitation(PRC), annual sunshine hours(SUN), average annual wind speed(WS), air pressure(AP) and relative humidity(RH).Results: Our study showed that(1) although the sexes did not differ significantly in body mass, males had longer wings than females;(2) body mass and wing length were positively correlated with altitude but not with latitude;(3) body mass and wing length were negatively correlated with AP and RH, but not significantly correlated with WS. Body mass was positively correlated with SUN and inversely correlated with MAT. Wing length was not correlated with MAT in either sex, but was positively correlated with SUN and negatively correlated with PRC in male sparrows;(4) variation in body mass could be best explained by AP and SUN, whereas variation in wing length could be explained by RH and AP in both sexes. In addition, variation in male sparrows can be explained by SUN, WS and PRC but not in females.Conclusions: Two different proxies of body size, body mass and wing length, correlated with same geographic factors and different climate factors. These differences may reflect selection for heat conservation in the case of body mass, and for efficient flight in the case of wing length.
文摘Gene flow and demographic history can play important roles in the adaptive genetic differentiation of species, which is rarely understood in the high-altitude adaptive evolution of birds. To elucidate genetic divergence of populations in the great tit complex （Parus major, P. minor and P. cinereus） at different elevations, we compared the genetic structure and gene flow in hemoglobin genes with neutral loci. Our results revealed the elevationally divergent structure of αA-globin gene, distinctive from that of the/βA-globin gene and neutral loci. We further investigated gene flow patterns among the populations in the central-northern （〉 1,000 m a.s.l.）, south-eastern （〈 1,000 m a.s.l.） regions and the Southwest Mountains （〉2,000 m a.s.l.） in China. The high-altitude （〉 1,000 m a.s.l.） diverged aA-globin genetic structure coincidαed with higher αA-globin gene flow between highland populations, in contrast to restricted neutral gene flow concordant with the phylogeny. The higher aA-globin gene flow suggests the possibility of adaptive evolution during population divergence, contrary to the lower aA-globin gene flow homogenized by neutral loci during population expantion. In concordance with patterns of historical gene flow, genotypic and allelic profiles provide distinctive patterns of fixation in different high-altitude populations. The fixation of alleles at contrasting elevations may primarily due to highland standing variants aA49Asn/72Asn/108Ala originating from the south-western population. Our findings demonstrate a pattern of genetic divergence with gene flow in major hemoglobin genes depending on population demographic history.
基金the Laojunshan Nature Reserve Management Bureau for providing support for field work(to B.D.,P.A.,Y.L.,P.R.and J.Z)the Chinese National Science and Technology Basic Work Program–The Comprehensive Scientific Survey of Biodiversity from Luoxiao range Region in China(2013FY111500)(to Y.L.and J.Z)+3 种基金Jornvall Foundation(to P.A.)the Sound Approach(to P.A.and U.O.)the Chinese Academy of Sciences Visiting Professorship for Senior International Scientists(No.2011T2S04,to P.A.)Swarovski Hong Kong Ltd.(to P.A.)
文摘Background: The Russet Bush Warbler Locustella(previously Bradypterus) mandelli complex occurs in mountains in the eastern Himalayas, southern China, Vietnam, the Philippines, and Indonesia. The taxonomy has been debated,with one(L. seebohmi) to four(L. seebohmi, L. mandelli, L. montis and L. timorensis) species having been recognised.Methods: We used an integrative approach, incorporating analyses of morphology, vocalizations and a molecular marker, to re-evaluate species limits in the L. mandelli complex.Results: We found that central Chinese L. mandelli differed from those from India through northern Southeast Asia to southeast China in plumage, morphometrics and song. All were easily classified by song, and(wing + culmen)/tail ratio overlapped only marginally. Both groups were reciprocally monophyletic in a mitochondrial cytochrome b(cytb) gene tree, with a mean divergence of 1.0 ± 0.2%. They were sympatric and mostly altitudinally segregated in the breeding season in southern Sichuan province. We found that the Mt Victoria(western Myanmar) population differed vocally from other L. mandelli, but no specimens are available. Taiwan Bush Warbler L. alishanensis was sister to the L. mandelli complex, with the most divergent song. Plumage, vocal and cytb evidence supported the distinctness of the south Vietnamese L. mandelli idonea. The Timor Bush Warbler L. timorensis, Javan Bush Warbler L.montis and Benguet Bush Warbler L. seebohmi differed distinctly in plumage, but among-population song variation in L. montis exceeded the differences between some populations of these taxa, and mean pairwise cytb divergences were only 0.5–0.9%. We also found that some L. montis populations differed morphologically.Conclusions: We conclude that the central Chinese population of Russet Bush Warbler represents a new species,which we describe herein, breeding at mid elevations in Sichuan, Shaanxi, Hubei, Hunan and Guizhou provinces.The taxonomic status of the other allopatric populations is less clear. However, as they differ to a degree comparable with that of the sympatric L. mandelli and the new species, we elevate L. idonea to species status, and retain L. seebohmi and L. montis as separate species, the latter with timorensis as a subspecies. Further research should focus on different populations of L. montis and the Mt Victoria population of L. mandelli.
基金This study was supported by the Strategic Priority Research Program of the Chinese Academy of Sciences （XDA05080703 and XDB13020300）, the State Key Program of National Science Foundation of China （31330073 31471990）, the Knowledge Innovation Program of the Chinese Academy of Sciences （KSCX2-EW-Z-5）, the Chinese Science Database （XXH12504-1-12） and Science and Technology Foundation Project （2014FY210200）.
文摘Large-scale patterns of species richness have gained much attention in recent years; however, the factors that drive high species richness are still controversial in local regions, especially in highly diversified montane regions. The Qinghai-Tibetan Plateau （QTP） and the surrounding mountains are biodiversity hot spots due to a high number of endemic montane species. Here, we explored the fac- tors underlying this high level of diversity by studying the relationship between species richness and environmental variables. The richness patterns of 758 resident bird species were summarized at the scale of 1°× 1° grid cell at different taxonomic levels （order, family, genus, and species） and in differ- ent taxonomic groups （Passeriformes, Galliformes, Falconiformes, and Columbiformes）. These rich- ness patterns were subsequently analyzed against habitat heterogeneity （topographical heterogen- eity and land cover）, temperature amplitude （annual temperature, annual precipitation, precipitation seasonality, and temperature seasonality） and a vegetation index （net primary productivity）. Our re- sults showed that the highest richness was found in the southeastern part of the QTP, the eastern Himalayas. The lowest richness was observed in the central plateau of the QTP. Topographical het- erogeneity and temperature amplitude are the primary factors that explain overall patterns of species richness in the QTP, although the specific effect of each environmental variable varies between the different taxonomic groups depending on their own evolutionary histories and ecological require- ments. High species richness in the southeastern QTP is mostly due to highly diversified habitat types and temperature zones along elevation gradients, whereas the low species richness in the cen- tral plateau of the QTP may be due to environmental and energetic constraints, as the central plateau is harsh environment.
文摘Why do taxonomists matter? The work of taxonomists is often understated if not completely misunderstood. Without taxonomists, organisms cannot be accurately identified, neither can these organisms be given universally accepted names, and reliably positioned in the phylogenetic tree of life. Thanks to the work of taxonomists over the last 269 years since Carl Linnaeus established the binomial system, we can now measure the health and wealth of our biodiversity in a refined, science-based inventory prescribed by stringent nomenclatural rules.
基金financial support from the Ministry of Science and Technology of China(Grant No.2014FY210200,to.T.C.and Y.G.)the Russian Science Foundation(Project No.14-50-00029,to M.K.)+3 种基金the Delia Koo Global Faculty Endowment of the Asian Studies Center,Michigan State University(to P.C.R.)The Sound Approach and Jornvall Foundation(both to P.A.and U.O.)the Chinese Academy of Sciences Visiting Professorship for Senior International Scientists(No.2011T2S04,to P.A.)Swarovski Optik Greater China(to P.A.)
文摘Background: The Plain-backed Thrush Zoothera mollissima breeds in the Himalayas and mountains of central China. It was long considered conspecific with the Long-tailed Thrush Zoothera dixoni, until these were shown to be broadly sympatric.Methods: We revise the Z. mollissima–Z. dixoni complex by integrating morphological, acoustic, genetic(two mitochondrial and two nuclear markers), ecological and distributional datasets.Results: In earlier field observations, we noted two very different song types of "Plain-backed" Thrush segregated by breeding habitat and elevation. Further integrative analyses congruently identify three groups: an alpine breeder in the Himalayas and Sichuan, China("Alpine Thrush"); a forest breeder in the eastern Himalayas and northwest Yunnan(at least), China("Himalayan Forest Thrush"); and a forest breeder in central Sichuan("Sichuan Forest Thrush"). Alpine and Himalayan Forest Thrushes are broadly sympatric, but segregated by habitat and altitude, and the same is probably true also for Alpine and Sichuan Forest Thrushes. These three groups differ markedly in morphology and songs. In addition, DNA sequence data from three non-breeding specimens from Yunnan indicate that yet another lineage exists("Yunnan Thrush"). However, we find no consistent morphological differences from Alpine Thrush, and its breeding range is unknown. Molecular phylogenetic analyses suggest that all four groups diverged at least a few million years ago, and identify Alpine Thrush and the putative "Yunnan Thrush" as sisters, and the two forest taxa as sisters. Cytochrome b divergences among the four Z. mollissima sensu lato(s.l.) clades are similar to those between any of them and Z. dixoni, and exceed that between the two congeneric outgroup species. We lectotypify the name Oreocincla rostrata Hodgson, 1845 with the Z. mollissima sensu stricto(s.s.) specimen long considered its type. No available name unambiguously pertains to the Himalayan Forest Thrush.Conclusions: The Plain-backed Thrush Z. mollissima s.l. comprises at least three species: Alpine Thrush Z. mollissima s.s., with a widespread alpine breeding distribution; Sichuan Forest Thrush Z. griseiceps, breeding in central Sichuan forests; and Himalayan Forest Thrush, breeding in the eastern Himalayas and northwest Yunnan(at least), which is described herein as a new species. "Yunnan Thrush" requires further study.
基金National Natural Science Foundation of China(3213000355,32070434,and 31900320)the Strategic Priority Research Program of the Chinese Academy of Sciences(XDA19050202)the Second Tibetan Plateau Scientific Expedition and Research(STEP)program(2019QZKK0304,2019QZKK0501)。
文摘Genetic diversity is one of the three dimensions of biodiversity and fundamental to various life forms on the Earth.Understanding the distribution pattern of genetic diversity and its driving forces has been an important topic in ecology,biogeography and conservation biology since the last decade.We investigated the genetic diversity pattern of passerine birds in the Mountains of Southwest China,a global biodiversity hotspot with the highest species richness of birds in the entire Eurasia,and explored the influencing forces of environmental variables on genetic diversity.We compiled 1189 Cytochrome b sequences of 27 passerine species from 152 geographic sites,covering the range of Mountains of Southwest China and its adjoining areas.We generated genetic diversity distribution maps using a grid-cell method based on nucleotide diversity and haplotype diversity indices.We further analyzed the variation pattern of the two indices along latitudinal,longitudinal,and elevational gradients.The correlations between the two indices and environmental variables were also evaluated.The nucleotide diversity hotspots were mostly located in the southern Hengduan Mountains,while for haplotype diversity,three hotspots were detected:the southeast edge of the Qinghai-Tibetan Plateau,the southern Hengduan Mountains and the Qinling Mountains.There was no monotonic increasing or decreasing pattern in nucleotide diversity or haplotype diversity along latitudinal,longitudinal or elevational gradients except for altitudinal range.Correlation and model selection analyses detected multiple environmental variables in driving genetic diversity patterns,including temperature,precipitation,vegetation,human influence,longitude and altitude range.Similar to the pattern of species richness,the nucleotide diversity pattern of passerine birds in the Mountains of Southwest China presents a decreasing trend from southwest to northeast,while the haplotype diversity pattern is more likely decreased from west to east.Our results indicate that the distribution pattern of genetic diversity may be derived from the complex topography and diverse microclimates in the Mountains of Southwest China.
基金P.A.gratefully acknowledges Jornvall Foundation,Mark and Mo Constantine,and the Chinese Academy of Sciences Visiting Professorship for Senior International Scientists(No.2011T2S04)P.A.and U.O.acknowledge the Swedish Research Council(Grant Nos.2015-04402 and 2015-04651,respectively)
文摘Background: The White-browed Shortwing(Brachypteryx montana) is widespread from the central Himalayas to the southeast Chinese mainland and the island of Taiwan, the Philippines and Indonesia. Multiple subspecies are recognised, and several of these have recently been suggested to be treated as separate species based on differences in morphology and songs.Methods: We here analyse plumage, morphometrics, songs, two mitochondrial and two nuclear markers, and geographical distributions of the two mainland Asian taxa B. m. cruralis and B. m. sinensis and the Taiwan Residents B. m. goodfellowi.Results: We conclude that these differ congruently in morphology, songs and DNA. Male B. m. goodfellowi is the most divergent in plumage(sexually monomorphic, unlike the two others; male similar to female), and B. m. cruralis and B. m. sinensis differ in male plumage maturation. The song of B. m. cruralis is strongly divergent from the others, whereas the songs of B. m. sinensis and B. m. goodfellowi are more similar to each other. Brachypteryx m. sinensis and B. m. goodfellowi are sisters, with an estimated divergence time 4.1 million years ago(mya; 95% highest posterior distribution [HPD] 2.8–5.5 mya), and B. m. cruralis separated from these two 5.8 mya(95% HPD 4.1–7.5 mya). We also report notable range extensions of B. m. sinensis as well as sympatry between this taxon and B. m. cruralis in Sichuan Province, China. Brachypteryx m. montana from Java is found to be more closely related to Lesser Shortwing(B. leucophris) and Rusty-bellied Shortwing(B. hyperythra) than to the mainland Asian and Taiwan Residents taxa.Conclusion: Our data support a recent proposal to treat the three mainland Asian and Taiwan Residents taxa as three species, separate from B. montana sensu stricto: B. cruralis(central Himalayas to south central China and south Vietnam), B. sinensis(north central to southeastern part of China's Mainland) and B. goodfellowi(Taiwan Island).
文摘An emerging paradigm in analysis of geographic differentiation and speciation is integration of phylogeographic analyses and paleo-distributional projections to gain insight into these complex historical processes （Peterson, 2009）. This approach hinges on the idea of a relatively stable landscape,
基金financially supported by the National Key Research and Development Program of China(Grant No.2022YFC2601601)the National Natural Science Foundation of China(Grant No.31727901)the China Scholarship Council(No.2019-13045 to H.X.)。
文摘With the continued development of tracking technology and increasing interest in animal movement,our understanding of migration behavior has become more comprehensive.However,there are still many species that have not been well studied,particularly sea birds.Here,we present the first year-round Global Positioning System(GPS)tracking data of the Black-tailed Gull(Larus crassirostris)at the population level.We used solar-powered GPS-Global System for Mobile communication(GSM)loggers to successfully track 30 individuals breeding at Xingrentuo Islet,Liaoning Province,China,for 1-3 years.Except for one individual who roamed in the far north of the Yellow Sea during non-breeding period,all others did a directed southward migration.Migration routes and wintering sites differed among migrating gulls and between years for the birds tracked for two or more years.Additionally,during wintering,the migrating gulls were more likely to travel over a large body of water and shift sites,and some trajectories were quite complex,which was probably closely related to what we observed in the field about their boat-chasing behavior.Compared to wintering movements,the post-breeding movements ranged over a smaller area.Specifically,almost all of them had a long post-breeding period near the breeding islet(≥120days,<220 km from the breeding islet),and 80%of the gulls who were tracked more than one year had at least one faithful post-breeding site.Compared to the post-breeding period,only approximately half of the migrating gulls had a pre-breeding period that was shorter(3-20 days)and closer to the breeding islet(≤80 km).Migration distance varied among migrating gulls(range 209-2405 km)and the gulls moved least distance during postbreeding period.Furthermore,we found that the southward movement of the migrating gulls occurred when the temperature near the breeding islet dropped;specifically,the gulls directly migrated southward away from the post-breeding site.Our results suggest that the Black-tailed Gull has a long post-breeding period but a short prebreeding period near the breeding islet and high diversity of their migrating patterns(in especial migration routes and wintering sites).
基金funded by the National Science and Technology Major Project(2018ZX10101004)the Key Collaborative Research Program of the Alliance of International Science Organizations(ANSO-CR-KP-2020-04)Strategic Priority Research Program of the Chinese Academy of Sciences(XDA19050202)。
文摘The avifauna in Tajikistan has been widely studied for the last century,but specific work on species richness pattern along elevation gradients in Tajikistan is rarely investigated.Here,we reported the first study of bird species richness(BSR)in the high-altitude mountain systems(Tien Shan and Pamir-Alay)of Tajikistan which are very sensitive to the recent climate changes.We aim to explore the relationship of BSR pattern with elevation gradient and to determine the potential drivers underlying the patterns.We collected occurrence data from field surveys,published articles,and open access websites to compile a list of bird species along elevational gradients across the whole country.The BSR was counted by 100 m elevational bands ranging from 294 m to 5146 m.The patterns of BSR were calculated separately for five groups:all breeding birds,Passeriformes,Non-Passeriformes,large elevational range species,and small elevational range species.We calculated ecological and climatic factors of planimetric area,mid-domain effect(MDE),habitat heterogeneity(HH),mean annual temperature(MAT),temperature annual range(TAR),annual precipitation(AP),normalized difference vegetation index(NDVI),human influence index(HII),and human disturbance(HD)in each elevational band.A combination of polynomial regression,Pearson’s correlation,and general least squares model analyses were used to test the effects of these factors on the BSR.A unimodal distribution pattern with a peak at 750-1950 m was observed for all breeding birds.The similar pattern was explored for Passeriformes and Non-Passeriformes,while species with different elevational range sizes had different shapes and peak elevations.For all the breeding birds and Passeriformes,BSR was significantly related to spatial,climate and human influence factors,while BSR of Non-Passeriformes positively correlated with all the given factors.First,second and fourth range classes of birds were significantly correlated with human influence factors.Moreover,large-ranged species had positive correlations with the middomain effect and weakly with habitat heterogeneity.We found that area,MAT and AP were the main factors to explain the richness pattern of birds,and the species richness increases with these three factors increasing.Multiple factors such as area and climate explain 84%of the variation in richness.Bivariate and multiple regression analyses revealed a consistent influence of spatial and climate factors in shaping the richness pattern for nearly all bird groups.
