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PlantEMS:A comprehensive database of epigenetic modification sites across multiple plant species 被引量:1
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作者 Fuying Dao Xueqin Xie +20 位作者 hongqi Zhang Zhengxing Guan Changchun Wu Wei Su Yijie Wei feitong hong Xinwei Luo Sijia Xie hongyan Lai Dong Gao Yuhe Yang Yang Zhang Lin Ning Shihao Li Yuduo Hao Benjamin Lebeau Crystal Chia Yin Ling Jian Huang Melissa Jane Fullwood Hao Lin Hao Lv 《Plant Communications》 2025年第4期8-11,共4页
Dear Editor,Epigenetic modifications are regulatory codes that control gene expression and can be stably inherited without alterations in the genomic sequence(Allis and Jenuwein,2016).Numerous studies have demonstrate... Dear Editor,Epigenetic modifications are regulatory codes that control gene expression and can be stably inherited without alterations in the genomic sequence(Allis and Jenuwein,2016).Numerous studies have demonstrated that epigenetic modifications regulate critical biological processes in plants,such as growth,development,response to environmental stressors,and reproduction(Zhang et al.,2023;Bulgakov,2024). 展开更多
关键词 regulatory codes genomic sequence allis epigenetic modifications growth plant species biological processes gene expression
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PlantAMP:A fine-tuned protein large language model for plant antimicrobial peptide prediction
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作者 Chengzhi Xie feitong hong +10 位作者 Yijie Wei Sijia Xie Xinwei Luo Xiaolong Li Wei Su Xueqin Xie Yuduo Hao Hao Lyu Hui Ding Huan Yang Fuying Dao 《Plant Communications》 2026年第3期21-24,共4页
Dear Editor,Plant antimicrobial peptides(PAMPs)are small bioactive molecules with broad-spectrum antimicrobial activity,low toxicity,and roles in promoting plant growth,making them promising candidates for application... Dear Editor,Plant antimicrobial peptides(PAMPs)are small bioactive molecules with broad-spectrum antimicrobial activity,low toxicity,and roles in promoting plant growth,making them promising candidates for applications in sustainable agriculture and translational medicine(Nagella et al.,2025).However,PAMP discovery is constrained by the requirement for labor-intensive wet-lab validation and by the limitations of computational AMP predictors,which often rely on handcrafted features,shallow embeddings,fixed-length sequences,or intensive computation,thereby reducing their accuracy and generalizability in realworld settings(Qin et al.,2025). 展开更多
关键词 antimicrobial peptides pamps translational medicine nagella computational prediction plant antimicrobial peptides translational medicine sustainable agriculture small bioactive molecules computational amp predictorswhich
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