Living cells are exquisitely tuned to sense and respond to changes in their environment.Repurposing these systems to create engineered biosensors has seen growing interest in the field of synthetic biology and provide...Living cells are exquisitely tuned to sense and respond to changes in their environment.Repurposing these systems to create engineered biosensors has seen growing interest in the field of synthetic biology and provides a foundation for many innovative applications spanning environmental monitoring to improved biobased production.In this review,we present a detailed overview of currently available biosensors and the methods that have supported their development,scale-up,and deployment.We focus on genetic sensors in living cells whose outputs affect gene expression.We find that emerging high-throughput experimental assays and evolutionary approaches combined with advanced bioinformatics and machine learning are establishing pipelines to produce genetic sensors for virtually any small molecule,protein,or nucleic acid.However,more complex sensing tasks based on classifying compositions of many stimuli and the reliable deployment of these systems into real-world settings remain challenges.We suggest that recent advances in our ability to precisely modify nonmodel organisms and the integration of proven control engineering principles(e.g.,feedback)into the broader design of genetic sensing systems will be necessary to overcome these hurdles and realize the immense potential of the field.展开更多
基金S.H.-N.J.was supported by a Dstl-funded PhD StudentshipT.E.G was supported by BrisEngBio,a UKRI-funded Engineering Biology Research Centre grant BB/W013959/1+2 种基金a Turing Fellowship from The Alan Turing Institute under EPSRC grant EP/N510129/1EEBio under EPSRC grant EP/Y014073/1a Royal Society University Research Fellowship grant URF\R\221008.
文摘Living cells are exquisitely tuned to sense and respond to changes in their environment.Repurposing these systems to create engineered biosensors has seen growing interest in the field of synthetic biology and provides a foundation for many innovative applications spanning environmental monitoring to improved biobased production.In this review,we present a detailed overview of currently available biosensors and the methods that have supported their development,scale-up,and deployment.We focus on genetic sensors in living cells whose outputs affect gene expression.We find that emerging high-throughput experimental assays and evolutionary approaches combined with advanced bioinformatics and machine learning are establishing pipelines to produce genetic sensors for virtually any small molecule,protein,or nucleic acid.However,more complex sensing tasks based on classifying compositions of many stimuli and the reliable deployment of these systems into real-world settings remain challenges.We suggest that recent advances in our ability to precisely modify nonmodel organisms and the integration of proven control engineering principles(e.g.,feedback)into the broader design of genetic sensing systems will be necessary to overcome these hurdles and realize the immense potential of the field.
