Background:Small ubiquitin-like modifier(SUMO)-specific proteases(SENPs)cleave the isopeptidic bond between SUMO1/2/3 and protein substrates,thus regulating the structure,activity,and lifetime of a variety of proteins...Background:Small ubiquitin-like modifier(SUMO)-specific proteases(SENPs)cleave the isopeptidic bond between SUMO1/2/3 and protein substrates,thus regulating the structure,activity,and lifetime of a variety of proteins.Recently,accumulating evidence has suggested that SENPs play a role in the initiation and progression of human cancers.Nevertheless,the potential role of the SENP family of proteins in liver cancer has yet to be fully elucidated.Methods:This study conducted a comprehensive bioinformatics analysis of the SENP family in liver cancer,including differential expression profiling,survival analysis,mutation and copy number variations(CNVs)assessment,immune infiltration and drug sensitivity correlation,functional enrichment analyses using data from The Cancer Genome Atlas(TCGA),Clinical Proteomic Tumor Analysis Consortium(CPTAC),LinkedOmics,and other public databases.Furthermore,we performed in vitro experiments using Huh-7 and Hep-3B cell lines to investigate the functional roles of SENP1 and SENP3 in hepatocellular carcinoma cell proliferation,colony formation,and migration.Results:Our results indicated that SENP1,3,and 7 were significantly overexpressed in liver hepatocellular carcinoma(LIHC).Elevated expressions of SENP1,3,and 7 are positively correlated with poor overall survival(OS)in LIHC patients.In addition,SENP1,3,and 7 expressions are related to immune infiltration and drug sensitivity.SENP1,3,and 7 co-expressed genes were enriched in mitochondrial function,ribosomal translation,and cell cycle control.Conclusion:SENP1,3,and 7 are prognostic biomarkers and potential therapeutic targets for LIHC.Knockdown of SENP1 and SENP3 inhibited the proliferation,clonogenicity,and migration of hepatocellular carcinoma cells.展开更多
Rice has different colors of pericarp, such as red, white and black. Red rice pericarp is rich in proanthocyanins, which have antioxidant properties and are beneficial to human health. In the present study, we analyze...Rice has different colors of pericarp, such as red, white and black. Red rice pericarp is rich in proanthocyanins, which have antioxidant properties and are beneficial to human health. In the present study, we analyzed the red-pericarp gene Rc of 419 rice landraces in Guangxi by genome-wide association study （GWAS）, and validated that the Rc gene regulated the red periearp trait in flee. By analyzing the genomie DNA of 97 red-pericarp flee eultivars, we identified two new alleles in C139 and C323. Then, the exons of Rcc＇9 and Rcc were sequenced with Sanger method, and the results demonstrated that the natural mutations within Re ene resulted in the two alleles Rcc and Rcc.展开更多
The magnesium-based materials are acknowledged as one of the most promising solid-state hydrogen storage mediums,attributed to their superior hydrogen storage capacity.Nevertheless,challenges such as sluggish kinetics...The magnesium-based materials are acknowledged as one of the most promising solid-state hydrogen storage mediums,attributed to their superior hydrogen storage capacity.Nevertheless,challenges such as sluggish kinetics,thermodynamic stability,inadequate cycling stability,and difficulties in activation impede the commercial utilization of Mg-based composites.Research indicates that reducing material dimensions to the nanoscale represents an efficacious strategy to address these issues.In this work,we systematically analyze the impact of nanosizing on Mg-based composites from three perspectives:nano-substrate modulation,nano-catalyst construction,and nano-catalytic mechanism.This analysis aims to provide guidance for the optimization and development of nanosizing strategies.For the regulation of nanosizing of Mg-based composites,the nanosizing of multi-element micro-alloyed Mg-rich systems,the integrated synthesis of multi-element multi-component nano-catalysts,and the coexistence of multiple nano-catalytic mechanisms are proposed in the light of the current state of the art research,artificial intelligence technology,and advanced characterization technology to achieve efficient,multidimensional,and simultaneous regulation of the hydrogen storage performance of Mg-based composites.This paper also envisions future directions and potential applications,emphasizing the importance of interdisciplinary approaches that integrate material science,chemistry,and computational modeling to overcome existing limitations and unlock the full potential of Mg-based hydrogen storage technologies.展开更多
Magnesium-based materials are considered as among the most promising candidates for hydrogen storage,owing to their high storage capacity,safety,and reliability.However,a passivation layer easily forms on the surface ...Magnesium-based materials are considered as among the most promising candidates for hydrogen storage,owing to their high storage capacity,safety,and reliability.However,a passivation layer easily forms on the surface of magnesium,which hinders the dissociation and diffusion of hydrogen.High dehydrogenation temperature,sluggish kinetics and activation difficulties hinder their commercial application.Herein,dual-strategy regulation through nickel microalloying and surface catalysis of TiO_(2/)MnO_(2)catalysts has been proposed to obtain more active sites and diffusion channels that promote hydrogen dissociation and transport.Mg8Ni-X(X=None,TiO_(2),and TiO_(2/)MnO_(2))can achieve more than 80%hydrogen absorption without activation.Mg8Ni-5 wt%TiO_(2)/MnO_(2)absorbs hydrogen 5.27 wt%in 30 s at 200℃and desorbs 5.15 wt%in 20 min at 325℃.The activation energy(E_(a))of hydrogen absorption is 52.04kJ/mol.These results are significantly better than those of Mg8Ni and MgH_(2)under the same conditions.The NiTi phase is generated in the course of hydrogenation,and the coexistence of multiple phases and multivalent Ti facilitates the transport of electrons and H.The dual-strategy regulation means of surface catalysis and microalloying is promising for the design of high-capacity fast hydrogen absorbed and desorbed materials without activation.展开更多
Magnesium-based solid-state hydrogen storage materials(Mg-HSMs)exhibit significant potential for the global energy transition due to their large hydrogen capacity and energy density.However,their high operating temper...Magnesium-based solid-state hydrogen storage materials(Mg-HSMs)exhibit significant potential for the global energy transition due to their large hydrogen capacity and energy density.However,their high operating temperatures,low operating efficiencies,and short service life have severely hindered largescale applications.To address the above challenges,diverse modification strategies have been proposed.Catalytic modification,achieved by introducing catalysts to enable compositional compounding and structural refinement,enhances surface active site density and bulk hydrogen diffusion pathways,reduces hydrogen dissociation energy barriers,weakens Mg–H bonds,and significantly improves kinetic properties.This approach is considered one of the most effective strategies.However,as research advances,the structures,forms,and catalytic mechanisms of catalysts have become increasingly diverse.Despite progress,challenges such as fragmented research outcomes,inconsistent performance metrics,and an incomplete understanding of structure-property relationships remain unresolved.Therefore,this work systematically summarizes recent advances in catalytic modification strategies for Mg-HSMs,emphasizing the role of catalysts in enhancing reaction kinetics and structural stability,the diversity of catalyst types,forms,and the underlying mechanisms governing catalytic efficacy.Based on critical analysis,this work identifies the current key technical bottlenecks and proposes that the design of next-generation catalysts and the future development of Mg-HSMs should be guided by the principles of‘multiphase heterogeneous interfacial composites'and‘synergistic development',aiming to provide theoretical guidance for the optimization and advancement of their performance.展开更多
The overuse of nitrogen(N)fertilizer in fields has increased production costs and raised environmental concerns.Increasing the N use efficiency(NUE)of rice varieties is crucial for sustainable agriculture.Here we repo...The overuse of nitrogen(N)fertilizer in fields has increased production costs and raised environmental concerns.Increasing the N use efficiency(NUE)of rice varieties is crucial for sustainable agriculture.Here we report the cloning and characterization of OsNPF3.1,a gene that controls rice NUE.An amino acid mutation in the OsNPF3.1 coding region caused different NUEs in wild and cultivated rice.OsNPF3.1,which is expressed mainly in the aerial parts of rice,also affects rice plant height,heading date,and thousand-grain weight.The OsNPF3.1 protein is located in the plasma membrane.When OsNPF3.1 was subjected to artificial selection,two naturally varying loci were associated with NUE,of which OsNPF3.1Chr6_8741040differed between indica and japonica rice.OsNPF3.1 can be used as a new target gene for breeding rice varieties with high NUE.展开更多
China is the largest rice-producing country,but the genomic landscape of rice diversity has not yet been clarified.In this study,we re-sequence 1070 rice varieties collected from China(400)and other regions in Asia(67...China is the largest rice-producing country,but the genomic landscape of rice diversity has not yet been clarified.In this study,we re-sequence 1070 rice varieties collected from China(400)and other regions in Asia(670).Among the six major rice groups(aus,indica-I,indica-II,aromatic,temperate japonica,and tropical japonica),almost all Chinese varieties belong to the indica-II or temperate japonica group.Most Chinese indica varieties belong to indica-II,which consists of two subgroups developed during different phases of rice breeding.The genomic segments underlying the differences between these subgroups span36.32 Mb.The Chinese japonica rice varieties fall into the temperate japonica group,consisting of two subgroups based on their geographical distribution.The genomic segments underlying the differences between these subgroups span 27.69 Mb.These differentiated segments in the Chinese indica varieties span 45 genes with nonsynonymous mutations that are closely related to variations in plant height and grain width.Fifty-four genes with nonsynonymous mutations are associated with the differences in heading date between the two Chinese japonica subgroups.These findings provide new insights into rice diversity in China that will facilitate the molecular breeding.展开更多
In response to global carbon neutrality targets,there is an urgent need for large-scale,clean hydrogen production technologies to supplant fossil fuels and underpin the establishment of a‘hydrogen economy’.The prosp...In response to global carbon neutrality targets,there is an urgent need for large-scale,clean hydrogen production technologies to supplant fossil fuels and underpin the establishment of a‘hydrogen economy’.The prospect of large-scale on-site green hydrolysis of Mg-based materials for hydrogen production has attracted wide attention.Aiming at the problems of easy formation of inert oxide layer on its surface and the production of Mg(OH)_(2) to hinder the hydrolysis process,it is urgent to explore efficient,low-cost and green modification strategies.In this work,the green modification strategy for hydrolyzing hydrogen production of Mg-based materials was summarized,and the fast initial kinetics and high hydrogen production rate could be achieved by adjusting hydrolysis medium conditions and modifying Mg-based material.The significance of hydrolytic hydrogen production technology and device development for the realization of Mg-based hydrolytic hydrogen production was evaluated.Meanwhile,this work looks forward to the future direction of hydrogen production modification by hydrolysis of Mg-based alloy,and gradually optimizes the hydrolysis performance of industrial multi-component waste Mg alloy under the premise of green hydrogen production,and proposes the goal of efficient modification of waste Mg alloy,high-quality utilization of seawater,and low-cost and controllable hydrogen production process.展开更多
Plant height(PH)is a complex trait regulated by the environment and multiple genes.PH directly affects crop yield,harvest index,and lodging resistance.From plant dwarf mutants,many genes related to PH have been identi...Plant height(PH)is a complex trait regulated by the environment and multiple genes.PH directly affects crop yield,harvest index,and lodging resistance.From plant dwarf mutants,many genes related to PH have been identified and described.Nonetheless,the molecular mechanism of height regulation in high-culm rice mutants has not been well studied.By using transcriptome and weighted gene co-expression network analysis(WGCNA),we identified the differentially expressed genes(DEGs)between high-culm rice mutants(MUT)and wild-type(WT)and explored the key pathways and potential candidate genes involved in PH regulation.Transcriptome analysis identified a total of 2,184 DEGs,of which 1,317 were identified at the jointing stage and 1,512 were identified at the heading stage.Kyoto Encyclopedia of Genes and Genomes enrichment showed that the enrichment pathways were mainly involved in plant hormone signal transduction,ABC transportation,and steroid hormone biosynthesis.Among these metabolic pathways,LOC_Os05g43910 and LOC_Os01g35030 were auxin(IAA)-related genes,up-regulated in MUT and LOC_Os02g08500(LEPTO1),LOC_Os11g04720,and LOC_Os12g04500 were cytokinin(CK)-related genes,downregulated in MUT.The WGCNA identified four modules(light cyan,dark grey,grey,and pale turquoise)closely related to PH,and seven key genes were screened from these modules,of which two were up-regulated cell wallrelated genes(LOC_Os01g26174(OsWAK5),LOC_Os06g05050)in MUT,and one gibberellic acid(GA)gene(LOC_Os06g37364,OsKO2)was also up-regulated.These genes might be closely related to PH regulation.These findings help us better understand the transcriptional regulation of rice plant growth and development and provide a theoretical basis for mapping and cloning the PH regulatory genes.展开更多
Modern cultivated rice plays a pivotal role in global food security.China accounts for nearly 30%of the world’s rice production and has developed numerous cultivated varieties over the past decades that are well adap...Modern cultivated rice plays a pivotal role in global food security.China accounts for nearly 30%of the world’s rice production and has developed numerous cultivated varieties over the past decades that are well adapted to diverse growing regions.However,the genomic bases underlying the phenotypes of these modern cultivars remain poorly characterized,limiting the exploitation of this vast resource for breeding specialized,regionally adapted cultivars.In this study,we constructed a comprehensive genetic variation map of modern rice using resequencing datasets from 6044 representative cultivars from five major ricegrowing regions in China.Our genomic and phenotypic analyses of this diversity panel revealed regional preferences for specific genomic backgrounds and traits,such as heading date,biotic/abiotic stress resistance,and grain shape,which are crucial for adaptation to local conditions and consumer preferences.We identified 3131 quantitative trait loci associated with 53 phenotypes across 212 datasets under various environmental conditions through genome-wide association studies.Notably,we cloned and functionally verified a novel gene related to grain length,OsGL3.6.By integrating multiple datasets,we developed RiceAtlas,a versatile multi-scale toolkit for rice breeding design.We successfully utilized the RiceAtlas breeding design function to rapidly improve the grain shape of the Suigeng4 cultivar.These valuable resources enhance our understanding of the adaptability and breeding requirements of modern rice and can facilitate advances in future rice-breeding initiatives.展开更多
Intestinal toxicity induced by chemotherapeutics has become an important reason for the interruption of therapy and withdrawal of approved agents. In this study, we demonstrated that chemotherapeutics-induced intestin...Intestinal toxicity induced by chemotherapeutics has become an important reason for the interruption of therapy and withdrawal of approved agents. In this study, we demonstrated that chemotherapeutics-induced intestinal damage were commonly characterized by the sharp upregulation of tryptophan(Trp)àkynurenine(KYN)àkynurenic acid(KA) axis metabolism. Mechanistically,chemotherapy-induced intestinal damage triggered the formation of an interleukin-6(IL-6)àindoleamine2,3-dioxygenase 1(IDO1)àaryl hydrocarbon receptor(AHR) positive feedback loop, which accelerated kynurenine pathway metabolism in gut. Besides, AHR and G protein-coupled receptor 35(GPR35) negative feedback regulates intestinal damage and inflammation to maintain intestinal integrity and homeostasis through gradually sensing kynurenic acid level in gut and macrophage, respectively. Moreover, based on virtual screening and biological verification, vardenafil and linagliptin as GPR35 and AHR agonists respectively were discovered from 2388 approved drugs. Importantly, the results that vardenafil and linagliptin significantly alleviated chemotherapy-induced intestinal toxicity in vivo suggests that chemotherapeutics combined with the two could be a promising therapeutic strategy for cancer patients in clinic.This work highlights GPR35 and AHR as the guardian of kynurenine pathway metabolism and core component of defense responses against intestinal damage.展开更多
The size of the top three leaves of rice plants is strongly associated with yield; thus, it is important to consider quantitative traits representing leaf size （e.g., length and width） when breeding novel rice varie...The size of the top three leaves of rice plants is strongly associated with yield; thus, it is important to consider quantitative traits representing leaf size （e.g., length and width） when breeding novel rice varieties. It is challenging to measure such traits on a large scale in the field, and little is known about the genetic factors that determine the size of the top three leaves. In the present study, a population of recombinant inbred lines （RILs） and reciprocal single chromosomal segment substitution lines （SSSLs） derived from the progeny of a japonica Asominori x indica IR24 cross were grown under four diverse environmental conditions. Six morphological traits associated with leaf size were measured,namely length and width of the flag, second and third leaves. In the RIL population, 49 QTLs were identified that clustered in 30 genomic region. Twenty-three of these QTLs were confirmed in the SSSL population. A comparison with previously reported genes/QTLs revealed eight novel genomic regions that contained uncharacterized ORFs associated with leaf size. The QTLs identified in this study can be used for marker- assisted breeding and for fine mapping of novel genetic elements controlling leaf size in rice.展开更多
基金supported by grants from the National Natural Science Foundation of China(Grant Nos.32070616 and 82170794).
文摘Background:Small ubiquitin-like modifier(SUMO)-specific proteases(SENPs)cleave the isopeptidic bond between SUMO1/2/3 and protein substrates,thus regulating the structure,activity,and lifetime of a variety of proteins.Recently,accumulating evidence has suggested that SENPs play a role in the initiation and progression of human cancers.Nevertheless,the potential role of the SENP family of proteins in liver cancer has yet to be fully elucidated.Methods:This study conducted a comprehensive bioinformatics analysis of the SENP family in liver cancer,including differential expression profiling,survival analysis,mutation and copy number variations(CNVs)assessment,immune infiltration and drug sensitivity correlation,functional enrichment analyses using data from The Cancer Genome Atlas(TCGA),Clinical Proteomic Tumor Analysis Consortium(CPTAC),LinkedOmics,and other public databases.Furthermore,we performed in vitro experiments using Huh-7 and Hep-3B cell lines to investigate the functional roles of SENP1 and SENP3 in hepatocellular carcinoma cell proliferation,colony formation,and migration.Results:Our results indicated that SENP1,3,and 7 were significantly overexpressed in liver hepatocellular carcinoma(LIHC).Elevated expressions of SENP1,3,and 7 are positively correlated with poor overall survival(OS)in LIHC patients.In addition,SENP1,3,and 7 expressions are related to immune infiltration and drug sensitivity.SENP1,3,and 7 co-expressed genes were enriched in mitochondrial function,ribosomal translation,and cell cycle control.Conclusion:SENP1,3,and 7 are prognostic biomarkers and potential therapeutic targets for LIHC.Knockdown of SENP1 and SENP3 inhibited the proliferation,clonogenicity,and migration of hepatocellular carcinoma cells.
基金Supported by The National Key Research and Development Program of China(2016YFD0100101-03)Science Research and Technology Development Program of Guangxi(AB16380117)+1 种基金the Fund for Talent Team of Guangxi Academy of Agricultural Sciences(2015YT15)the Special Fund for Basic Science Research of Guangxi Academy of Agricultural Sciences(2015JZ16,2015JZ17,2017YM18)
文摘Rice has different colors of pericarp, such as red, white and black. Red rice pericarp is rich in proanthocyanins, which have antioxidant properties and are beneficial to human health. In the present study, we analyzed the red-pericarp gene Rc of 419 rice landraces in Guangxi by genome-wide association study （GWAS）, and validated that the Rc gene regulated the red periearp trait in flee. By analyzing the genomie DNA of 97 red-pericarp flee eultivars, we identified two new alleles in C139 and C323. Then, the exons of Rcc＇9 and Rcc were sequenced with Sanger method, and the results demonstrated that the natural mutations within Re ene resulted in the two alleles Rcc and Rcc.
基金financially supported by the Key Research and Development Projects of Shaanxi Province(Grant Nos.2025CYYBXM-154 and 2024GX-YBXM-213)the Yulin Science and Technology Bureau(Grant Nos.2023-CXY-202 and 2024-CXY-154)the Technology Innovation Leading Program of Shaanxi(Programs 2023GXLH-068)。
文摘The magnesium-based materials are acknowledged as one of the most promising solid-state hydrogen storage mediums,attributed to their superior hydrogen storage capacity.Nevertheless,challenges such as sluggish kinetics,thermodynamic stability,inadequate cycling stability,and difficulties in activation impede the commercial utilization of Mg-based composites.Research indicates that reducing material dimensions to the nanoscale represents an efficacious strategy to address these issues.In this work,we systematically analyze the impact of nanosizing on Mg-based composites from three perspectives:nano-substrate modulation,nano-catalyst construction,and nano-catalytic mechanism.This analysis aims to provide guidance for the optimization and development of nanosizing strategies.For the regulation of nanosizing of Mg-based composites,the nanosizing of multi-element micro-alloyed Mg-rich systems,the integrated synthesis of multi-element multi-component nano-catalysts,and the coexistence of multiple nano-catalytic mechanisms are proposed in the light of the current state of the art research,artificial intelligence technology,and advanced characterization technology to achieve efficient,multidimensional,and simultaneous regulation of the hydrogen storage performance of Mg-based composites.This paper also envisions future directions and potential applications,emphasizing the importance of interdisciplinary approaches that integrate material science,chemistry,and computational modeling to overcome existing limitations and unlock the full potential of Mg-based hydrogen storage technologies.
基金financially supported by the Yulin Science and Technology Bureau(Grant No.2023-CXY-202)Scientific Research Program Funded by Shaanxi Provincial Education Department(Grant No.23JP008)+1 种基金Key Research and Development Projects of Shaanxi Province(Grant No.2024GX-YBXM-213)National Natural Science Foundation of China(Grant No.52102109)。
文摘Magnesium-based materials are considered as among the most promising candidates for hydrogen storage,owing to their high storage capacity,safety,and reliability.However,a passivation layer easily forms on the surface of magnesium,which hinders the dissociation and diffusion of hydrogen.High dehydrogenation temperature,sluggish kinetics and activation difficulties hinder their commercial application.Herein,dual-strategy regulation through nickel microalloying and surface catalysis of TiO_(2/)MnO_(2)catalysts has been proposed to obtain more active sites and diffusion channels that promote hydrogen dissociation and transport.Mg8Ni-X(X=None,TiO_(2),and TiO_(2/)MnO_(2))can achieve more than 80%hydrogen absorption without activation.Mg8Ni-5 wt%TiO_(2)/MnO_(2)absorbs hydrogen 5.27 wt%in 30 s at 200℃and desorbs 5.15 wt%in 20 min at 325℃.The activation energy(E_(a))of hydrogen absorption is 52.04kJ/mol.These results are significantly better than those of Mg8Ni and MgH_(2)under the same conditions.The NiTi phase is generated in the course of hydrogenation,and the coexistence of multiple phases and multivalent Ti facilitates the transport of electrons and H.The dual-strategy regulation means of surface catalysis and microalloying is promising for the design of high-capacity fast hydrogen absorbed and desorbed materials without activation.
基金financially supported by the Key Research and Development Projects of Shaanxi Province(Grant Nos.2025CYYBXM-154 and 2024GX-YBXM-213)the Yulin Science and Technology Bureau(Grant Nos.2023-CXY-202 and 2024-CXY-154)+2 种基金the Scientific Research Program Funded by Shaanxi Provincial Education Department(Grant No.23JP008)the Natural Science Foundation of Qinghai Province for Distinguished Young Scholars(Grant No.2025-ZJ-966J)the Talent youth project of Chinese Academy of Sciences(Grant No.E410GC03)。
文摘Magnesium-based solid-state hydrogen storage materials(Mg-HSMs)exhibit significant potential for the global energy transition due to their large hydrogen capacity and energy density.However,their high operating temperatures,low operating efficiencies,and short service life have severely hindered largescale applications.To address the above challenges,diverse modification strategies have been proposed.Catalytic modification,achieved by introducing catalysts to enable compositional compounding and structural refinement,enhances surface active site density and bulk hydrogen diffusion pathways,reduces hydrogen dissociation energy barriers,weakens Mg–H bonds,and significantly improves kinetic properties.This approach is considered one of the most effective strategies.However,as research advances,the structures,forms,and catalytic mechanisms of catalysts have become increasingly diverse.Despite progress,challenges such as fragmented research outcomes,inconsistent performance metrics,and an incomplete understanding of structure-property relationships remain unresolved.Therefore,this work systematically summarizes recent advances in catalytic modification strategies for Mg-HSMs,emphasizing the role of catalysts in enhancing reaction kinetics and structural stability,the diversity of catalyst types,forms,and the underlying mechanisms governing catalytic efficacy.Based on critical analysis,this work identifies the current key technical bottlenecks and proposes that the design of next-generation catalysts and the future development of Mg-HSMs should be guided by the principles of‘multiphase heterogeneous interfacial composites'and‘synergistic development',aiming to provide theoretical guidance for the optimization and advancement of their performance.
基金supported by the National Natural Science Foundation of China(32060476 and 31860371)Guangxi Department of Science and Technology(AA22068087-4)+3 种基金Guangxi Natural Science Foundation of China(2015GXNSFAA139054,2018GXNSFAA138124,and 2020GXNSFAA259041)Guangxi Ministry of Science and Technology(AB21238009)Special Fund of Local Science and Technology Development for the Central Guidance(ZY21195034)Guangxi Academy of Agricultural Sciences(2021JM04,2021JM49,2021YT030,QN-25,and QN-35)。
文摘The overuse of nitrogen(N)fertilizer in fields has increased production costs and raised environmental concerns.Increasing the N use efficiency(NUE)of rice varieties is crucial for sustainable agriculture.Here we report the cloning and characterization of OsNPF3.1,a gene that controls rice NUE.An amino acid mutation in the OsNPF3.1 coding region caused different NUEs in wild and cultivated rice.OsNPF3.1,which is expressed mainly in the aerial parts of rice,also affects rice plant height,heading date,and thousand-grain weight.The OsNPF3.1 protein is located in the plasma membrane.When OsNPF3.1 was subjected to artificial selection,two naturally varying loci were associated with NUE,of which OsNPF3.1Chr6_8741040differed between indica and japonica rice.OsNPF3.1 can be used as a new target gene for breeding rice varieties with high NUE.
基金supported by the National Key Research and Development Program of China(2016YFD0100301 to Z.X.M.)the National Natural Science Foundation of China(31670211 and31970237 to Z.X.M.)+3 种基金Sanya Yazhou Bay Science and Technology City(SKJC-2020-02-001 to Z.X.M.)the Central Public-interest Scientific Institution Basal Research Fund(S2021ZD01 to Z.X.M.)the Major Incubation Project of Shenyang Normal University(ZD20210 to P.H.B.)the Hundred Talent Program of Shenyang Normal University(SSDBRJH2002012 to P.H.B.)。
文摘China is the largest rice-producing country,but the genomic landscape of rice diversity has not yet been clarified.In this study,we re-sequence 1070 rice varieties collected from China(400)and other regions in Asia(670).Among the six major rice groups(aus,indica-I,indica-II,aromatic,temperate japonica,and tropical japonica),almost all Chinese varieties belong to the indica-II or temperate japonica group.Most Chinese indica varieties belong to indica-II,which consists of two subgroups developed during different phases of rice breeding.The genomic segments underlying the differences between these subgroups span36.32 Mb.The Chinese japonica rice varieties fall into the temperate japonica group,consisting of two subgroups based on their geographical distribution.The genomic segments underlying the differences between these subgroups span 27.69 Mb.These differentiated segments in the Chinese indica varieties span 45 genes with nonsynonymous mutations that are closely related to variations in plant height and grain width.Fifty-four genes with nonsynonymous mutations are associated with the differences in heading date between the two Chinese japonica subgroups.These findings provide new insights into rice diversity in China that will facilitate the molecular breeding.
基金supported by Yulin Science and Technology Bureau (Grant No 2023-CXY-202)Scientific Research Program Funded by Shaanxi Provincial Education Department (Grant No 23JP008)Key Research and Development Projects of Shaanxi Province (Grant No 2024GXYBXM-213) and (Grant No 52102109)
文摘In response to global carbon neutrality targets,there is an urgent need for large-scale,clean hydrogen production technologies to supplant fossil fuels and underpin the establishment of a‘hydrogen economy’.The prospect of large-scale on-site green hydrolysis of Mg-based materials for hydrogen production has attracted wide attention.Aiming at the problems of easy formation of inert oxide layer on its surface and the production of Mg(OH)_(2) to hinder the hydrolysis process,it is urgent to explore efficient,low-cost and green modification strategies.In this work,the green modification strategy for hydrolyzing hydrogen production of Mg-based materials was summarized,and the fast initial kinetics and high hydrogen production rate could be achieved by adjusting hydrolysis medium conditions and modifying Mg-based material.The significance of hydrolytic hydrogen production technology and device development for the realization of Mg-based hydrolytic hydrogen production was evaluated.Meanwhile,this work looks forward to the future direction of hydrogen production modification by hydrolysis of Mg-based alloy,and gradually optimizes the hydrolysis performance of industrial multi-component waste Mg alloy under the premise of green hydrogen production,and proposes the goal of efficient modification of waste Mg alloy,high-quality utilization of seawater,and low-cost and controllable hydrogen production process.
基金supported by the National Natural Science Foundation of China(31760428,31860371,and 32060476)Guangxi Natural Science Foundation of China(2020GXNSFAA259041)+1 种基金Guangxi Science and Technology Project(Guike AB21238009)Guangxi Academy of Agricultural Sciences Foundation(2021JM04,JM49,YT030,QN-11,14,20,29,and 35).
文摘Plant height(PH)is a complex trait regulated by the environment and multiple genes.PH directly affects crop yield,harvest index,and lodging resistance.From plant dwarf mutants,many genes related to PH have been identified and described.Nonetheless,the molecular mechanism of height regulation in high-culm rice mutants has not been well studied.By using transcriptome and weighted gene co-expression network analysis(WGCNA),we identified the differentially expressed genes(DEGs)between high-culm rice mutants(MUT)and wild-type(WT)and explored the key pathways and potential candidate genes involved in PH regulation.Transcriptome analysis identified a total of 2,184 DEGs,of which 1,317 were identified at the jointing stage and 1,512 were identified at the heading stage.Kyoto Encyclopedia of Genes and Genomes enrichment showed that the enrichment pathways were mainly involved in plant hormone signal transduction,ABC transportation,and steroid hormone biosynthesis.Among these metabolic pathways,LOC_Os05g43910 and LOC_Os01g35030 were auxin(IAA)-related genes,up-regulated in MUT and LOC_Os02g08500(LEPTO1),LOC_Os11g04720,and LOC_Os12g04500 were cytokinin(CK)-related genes,downregulated in MUT.The WGCNA identified four modules(light cyan,dark grey,grey,and pale turquoise)closely related to PH,and seven key genes were screened from these modules,of which two were up-regulated cell wallrelated genes(LOC_Os01g26174(OsWAK5),LOC_Os06g05050)in MUT,and one gibberellic acid(GA)gene(LOC_Os06g37364,OsKO2)was also up-regulated.These genes might be closely related to PH regulation.These findings help us better understand the transcriptional regulation of rice plant growth and development and provide a theoretical basis for mapping and cloning the PH regulatory genes.
基金supported by the National Key Research and Development Program of China(2021YFD1200500)the Biological Breeding-National Science and Technology Major Project(2022ZD04017)+2 种基金the Biological Breeding-Major Projects(2023ZD04076)the National Natural Science Foundation of China(32371996)the Agricultural Science and Technology Innovation Program of the Chinese Academy of Agricultural Sciences.
文摘Modern cultivated rice plays a pivotal role in global food security.China accounts for nearly 30%of the world’s rice production and has developed numerous cultivated varieties over the past decades that are well adapted to diverse growing regions.However,the genomic bases underlying the phenotypes of these modern cultivars remain poorly characterized,limiting the exploitation of this vast resource for breeding specialized,regionally adapted cultivars.In this study,we constructed a comprehensive genetic variation map of modern rice using resequencing datasets from 6044 representative cultivars from five major ricegrowing regions in China.Our genomic and phenotypic analyses of this diversity panel revealed regional preferences for specific genomic backgrounds and traits,such as heading date,biotic/abiotic stress resistance,and grain shape,which are crucial for adaptation to local conditions and consumer preferences.We identified 3131 quantitative trait loci associated with 53 phenotypes across 212 datasets under various environmental conditions through genome-wide association studies.Notably,we cloned and functionally verified a novel gene related to grain length,OsGL3.6.By integrating multiple datasets,we developed RiceAtlas,a versatile multi-scale toolkit for rice breeding design.We successfully utilized the RiceAtlas breeding design function to rapidly improve the grain shape of the Suigeng4 cultivar.These valuable resources enhance our understanding of the adaptability and breeding requirements of modern rice and can facilitate advances in future rice-breeding initiatives.
基金supported by the National Nature Science Foundation of China (NSFC Nos.81773861 and 81773682)National Science and Technology Major Project (2017ZX09101001, China)+3 种基金Jiangsu Provincial National Science Foundation for Distinguished Young Scholars(No. BK20180027, China)Double First-Class University Projectthe Program for Jiangsu province Innovative Research Teamfunded by the Priority Academic Program Development of Jiangsu Higher Education Institutions (PAPD, China)。
文摘Intestinal toxicity induced by chemotherapeutics has become an important reason for the interruption of therapy and withdrawal of approved agents. In this study, we demonstrated that chemotherapeutics-induced intestinal damage were commonly characterized by the sharp upregulation of tryptophan(Trp)àkynurenine(KYN)àkynurenic acid(KA) axis metabolism. Mechanistically,chemotherapy-induced intestinal damage triggered the formation of an interleukin-6(IL-6)àindoleamine2,3-dioxygenase 1(IDO1)àaryl hydrocarbon receptor(AHR) positive feedback loop, which accelerated kynurenine pathway metabolism in gut. Besides, AHR and G protein-coupled receptor 35(GPR35) negative feedback regulates intestinal damage and inflammation to maintain intestinal integrity and homeostasis through gradually sensing kynurenic acid level in gut and macrophage, respectively. Moreover, based on virtual screening and biological verification, vardenafil and linagliptin as GPR35 and AHR agonists respectively were discovered from 2388 approved drugs. Importantly, the results that vardenafil and linagliptin significantly alleviated chemotherapy-induced intestinal toxicity in vivo suggests that chemotherapeutics combined with the two could be a promising therapeutic strategy for cancer patients in clinic.This work highlights GPR35 and AHR as the guardian of kynurenine pathway metabolism and core component of defense responses against intestinal damage.
基金supported by the National Natural Science Foundation of China(31471174,and 31271798)
文摘The size of the top three leaves of rice plants is strongly associated with yield; thus, it is important to consider quantitative traits representing leaf size （e.g., length and width） when breeding novel rice varieties. It is challenging to measure such traits on a large scale in the field, and little is known about the genetic factors that determine the size of the top three leaves. In the present study, a population of recombinant inbred lines （RILs） and reciprocal single chromosomal segment substitution lines （SSSLs） derived from the progeny of a japonica Asominori x indica IR24 cross were grown under four diverse environmental conditions. Six morphological traits associated with leaf size were measured,namely length and width of the flag, second and third leaves. In the RIL population, 49 QTLs were identified that clustered in 30 genomic region. Twenty-three of these QTLs were confirmed in the SSSL population. A comparison with previously reported genes/QTLs revealed eight novel genomic regions that contained uncharacterized ORFs associated with leaf size. The QTLs identified in this study can be used for marker- assisted breeding and for fine mapping of novel genetic elements controlling leaf size in rice.
