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从头算价键理论方法中块正交轨道的构造与应用
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作者 曹婵 周晨 吴玮 《科学通报》 北大核心 2025年第34期5862-5870,共9页
本文基于从头算价键理论提出了一种新型轨道类型——块正交轨道(block-orthogonalized orbitals,BOOs),并发展了一种适用于后价键自洽场(post-VBSCF)方法中虚轨道构造的新方案.BOO同时具备轨道内部正交和定域化的特性,有效解决了传统pos... 本文基于从头算价键理论提出了一种新型轨道类型——块正交轨道(block-orthogonalized orbitals,BOOs),并发展了一种适用于后价键自洽场(post-VBSCF)方法中虚轨道构造的新方案.BOO同时具备轨道内部正交和定域化的特性,有效解决了传统post-VBSCF方法在保持化学直观性与满足轨道正交性需求之间的冲突.此外,该方案还克服了传统价键组态相互作用(valence bond configuration interaction,VBCI)方法在处理多原子分子时的局限性.与基于严格定域的杂化原子轨道(hybrid atomic orbital,HAO)的传统VBCI方法相比,采用BOO虚轨道的VBCI不仅保留了激发价键结构的直观化学图像,而且在计算效率和精度上均实现了一定提升.本文的工作为未来进一步发展高效的post-VBSCF方法和算法提供了基础. 展开更多
关键词 后价键自洽场方法 块正交轨道 虚轨道 动态电子相关
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Monitoring disulfide bonds making and breaking in biological nanopore at single molecule level 被引量:2
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作者 Bing Zhou Ya-Qian Wang +2 位作者 chan cao Da-Wei Li Yi-Tao Long 《Science China Chemistry》 SCIE EI CAS CSCD 2018年第11期1385-1388,共4页
Monitoring subtle changes in ionic current flow through a nanopore could be applied to observe single molecule reaction. Here,we introduced cysteine to substitute for lysine at position 238 constructing a mutant aerol... Monitoring subtle changes in ionic current flow through a nanopore could be applied to observe single molecule reaction. Here,we introduced cysteine to substitute for lysine at position 238 constructing a mutant aerolysin K238 C. It could be regarded as a nanoreactor to efficiently visualize chemical bonds making and breaking. The compound 5,5′-dithiobis-(2-nitrobenzoic acid)(DTNB) was selected as a reactant coming into collisions on the interface of the pore to occur a reversible reaction. Our results showed that the mutant aerolysin could respond to three molecules of DTNB simultaneously and reflect corresponding levels with distinguishable current signals. Therefore, this method constitutes a simple, generic tool for monitoring single molecule reaction, which evokes a guidance for the mutant aerolysin towards the application of tracking other more reactions at single molecule level. 展开更多
关键词 disulfide bond chemical bond making and breaking aerolysin nanopore single molecule level
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