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Transient receptor potential vanilloid-1 (TRPV1) is a mediator of noise-induced neural damage in zebrafish and mice 被引量:1
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作者 Ruicun Liu boyu luo +11 位作者 Honglu Yan Qing Lin Wei Liu Xiaowei Hao Shuai Huang Zhenjun luo Tuoyu Liu Jinyu Li Zhiyuan Shi Songzuo Liu Qing Yuan Yue Teng 《Science China(Life Sciences)》 2025年第7期2028-2042,共15页
Sound pollution(noise) is an increasing environmental concern,particularly associated with neurological and neurobehavioral abnormalities.However,the molecular mechanisms underlying noise-induced neural damage remain ... Sound pollution(noise) is an increasing environmental concern,particularly associated with neurological and neurobehavioral abnormalities.However,the molecular mechanisms underlying noise-induced neural damage remain unclear.In this study,we conducted transcriptional profiling of zebrafish to investigate the mechanisms underlying acoustic stimulation(1,000 Hz,130 d B).RNA sequencing and subsequent experiments revealed that TRPV1 is an important mediator of noise-induced neural damage in Hu C(elavl3)-GFP transgenic zebrafish.The results demonstrated that inhibiting TRPV1 significantly mitigated noise-induced neural damage in zebrafish with trpv1 gene RNAi and in mice with Trpv1 knockout(Trpv1~(-/-)).Specifically,TRPV1 antagonism significantly reduced neural damage in zebrafish and mice under noise exposure.Furthermore,activated TRPV1 could induce endoplasmic reticulum stress,leading to apoptosis and resulting in neural damage in mice and HEK293T cells.The findings of this study not only enhance our understanding of the molecular mechanisms underlying sound-induced neural damage but also highlight a novel target for drug intervention. 展开更多
关键词 noise pollution TRPV1 neural damage mechanisms apoptosis
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Mechanistic insights into the orthogonal functionality of an AHL-mediated quorum-sensing circuit in Yersinia pseudotuberculosis
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作者 boyu luo Shanshan Wu +9 位作者 Wei Liu Dongdong Zhang Ruicun Liu Tuoyu Liu Zhi Sun Ziqun Wei Mingyu Liu Zhiyuan Shi Niu Huang Yue Teng 《Synthetic and Systems Biotechnology》 2025年第1期174-184,共11页
YpsR,a pivotal regulatory protein in the quorum-sensing(QS)of Yersinia pseudotuberculosis(Y.pstb),is essential for molecular signaling,yet its molecular mechanisms remain poorly understood.Herein,this study systemati-... YpsR,a pivotal regulatory protein in the quorum-sensing(QS)of Yersinia pseudotuberculosis(Y.pstb),is essential for molecular signaling,yet its molecular mechanisms remain poorly understood.Herein,this study systemati-cally investigates the interactions between YpsR and acyl-homoserine lactones(AHLs),shedding light on the selective mechanism of YpsR to various AHL molecules.Using molecular docking and surface plasmon resonance(SPR)analysis,we confirmed YpsR’s binding affinities,with the strongest observed for 3OC6-HSL,which notably inhibited Y.pstb growth.Additionally,we engineered a whole-cell biosensor based on YpsR-AHL interaction,which exhibited sensitivity to the signal molecule 3OC6-HSL produced by Y.pstb.Furthermore,key YpsR resi-dues(S32,Y50,W54,D67)involved in AHL binding were identified and validated.Overall,this research elu-cidates the mechanisms of QS signal recognition in Y.pstb,providing valuable insights that support the development of diagnostic tools for detecting Y.pstb infections. 展开更多
关键词 Yersinia pseudotuberculosis Quorum sensing Molecular dynamics Genetic circuit Biosensors
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SemiSynBio:A new era for neuromorphic computing
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作者 Ruicun Liu Tuoyu Liu +6 位作者 Wuge Liu boyu luo Yuchen Li Xinyue Fan Xianchao Zhang Wei Cui Yue Teng 《Synthetic and Systems Biotechnology》 SCIE CSCD 2024年第3期594-599,共6页
Neuromorphic computing has the potential to achieve the requirements of the next-generation artificial intelligence(AI)systems,due to its advantages of adaptive learning and parallel computing.Meanwhile,biocomputing h... Neuromorphic computing has the potential to achieve the requirements of the next-generation artificial intelligence(AI)systems,due to its advantages of adaptive learning and parallel computing.Meanwhile,biocomputing has seen ongoing development with the rise of synthetic biology,becoming the driving force for new generation semiconductor synthetic biology(SemiSynBio)technologies.DNA-based biomolecules could potentially perform the functions of Boolean operators as logic gates and be used to construct artificial neural networks(ANNs),providing the possibility of executing neuromorphic computing at the molecular level.Herein,we briefly outline the principles of neuromorphic computing,describe the advances in DNA computing with a focus on synthetic neuromorphic computing,and summarize the major challenges and prospects for synthetic neuromorphic computing.We believe that constructing such synthetic neuromorphic circuits will be an important step toward realizing neuromorphic computing,which would be of widespread use in biocomputing,DNA storage,information security,and national defense. 展开更多
关键词 Neuromorphic computing Synthetic biology BIOCOMPUTING Artificial intelligence Neuromorphic genetic circuits
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细菌群体感应系统在合成生物学中的应用进展
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作者 罗博煜 刘拓宇 +1 位作者 孙智 滕越 《科学通报》 CSCD 北大核心 2024年第36期5213-5224,共12页
群体感应系统(quorum sensing system,QS)是一种感应细胞密度,并相应地调控基因表达的自诱导系统.细菌利用群体感应系统实现细胞间通讯,响应邻近群落的种群密度和物种间与物种内组成的变化,调控菌体的生理特性,对细菌群体的稳定性具有... 群体感应系统(quorum sensing system,QS)是一种感应细胞密度,并相应地调控基因表达的自诱导系统.细菌利用群体感应系统实现细胞间通讯,响应邻近群落的种群密度和物种间与物种内组成的变化,调控菌体的生理特性,对细菌群体的稳定性具有重要作用.群体感应系统因其结构简单、机理清晰而广泛应用于合成生物学的研究.本综述概述了群体感应系统的工作原理,并基于不同自诱导因子对群体感应系统进行分类,分析了其多样性、串扰和正交性等特点,说明了群体感应系统调控蛋白与信号分子的结合机制,阐述了群体感应系统用于生物传感器,特别是肠道和皮肤菌群监测以及构建合成生物学群落等合成生物学中的应用,旨在加深对群体感应系统调控机制的理解,以期为更加全面且深入探究群体感应系统调控机制和扩大其在合成生物学中的应用范围提供帮助. 展开更多
关键词 群体感应系统 合成生物学 细胞间通讯 合成微生物群落 生物传感器
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