The quick spread of the CoronavirusDisease(COVID-19)infection around the world considered a real danger for global health.The biological structure and symptoms of COVID-19 are similar to other viral chest maladies,whi...The quick spread of the CoronavirusDisease(COVID-19)infection around the world considered a real danger for global health.The biological structure and symptoms of COVID-19 are similar to other viral chest maladies,which makes it challenging and a big issue to improve approaches for efficient identification of COVID-19 disease.In this study,an automatic prediction of COVID-19 identification is proposed to automatically discriminate between healthy and COVID-19 infected subjects in X-ray images using two successful moderns are traditional machine learning methods(e.g.,artificial neural network(ANN),support vector machine(SVM),linear kernel and radial basis function(RBF),k-nearest neighbor(k-NN),Decision Tree(DT),andCN2 rule inducer techniques)and deep learningmodels(e.g.,MobileNets V2,ResNet50,GoogleNet,DarkNet andXception).A largeX-ray dataset has been created and developed,namely the COVID-19 vs.Normal(400 healthy cases,and 400 COVID cases).To the best of our knowledge,it is currently the largest publicly accessible COVID-19 dataset with the largest number of X-ray images of confirmed COVID-19 infection cases.Based on the results obtained from the experiments,it can be concluded that all the models performed well,deep learning models had achieved the optimum accuracy of 98.8%in ResNet50 model.In comparison,in traditional machine learning techniques, the SVM demonstrated the best result for an accuracy of 95% and RBFaccuracy 94% for the prediction of coronavirus disease 2019.展开更多
One of the most complex tasks for computer-aided diagnosis(Intelligent decision support system)is the segmentation of lesions.Thus,this study proposes a new fully automated method for the segmentation of ovarian and b...One of the most complex tasks for computer-aided diagnosis(Intelligent decision support system)is the segmentation of lesions.Thus,this study proposes a new fully automated method for the segmentation of ovarian and breast ultrasound images.The main contributions of this research is the development of a novel Viola–James model capable of segmenting the ultrasound images of breast and ovarian cancer cases.In addition,proposed an approach that can efficiently generate region-of-interest(ROI)and new features that can be used in characterizing lesion boundaries.This study uses two databases in training and testing the proposed segmentation approach.The breast cancer database contains 250 images,while that of the ovarian tumor has 100 images obtained from several hospitals in Iraq.Results of the experiments showed that the proposed approach demonstrates better performance compared with those of other segmentation methods used for segmenting breast and ovarian ultrasound images.The segmentation result of the proposed system compared with the other existing techniques in the breast cancer data set was 78.8%.By contrast,the segmentation result of the proposed system in the ovarian tumor data set was 79.2%.In the classification results,we achieved 95.43%accuracy,92.20%sensitivity,and 97.5%specificity when we used the breast cancer data set.For the ovarian tumor data set,we achieved 94.84%accuracy,96.96%sensitivity,and 90.32%specificity.展开更多
With recent breakthroughs in artificial intelligence,the use of deep learning models achieved remarkable advances in computer vision,ecommerce,cybersecurity,and healthcare.Particularly,numerous applications provided e...With recent breakthroughs in artificial intelligence,the use of deep learning models achieved remarkable advances in computer vision,ecommerce,cybersecurity,and healthcare.Particularly,numerous applications provided efficient solutions to assist radiologists for medical imaging analysis.For instance,automatic lesion detection and classification in mammograms is still considered a crucial task that requires more accurate diagnosis and precise analysis of abnormal lesions.In this paper,we propose an end-to-end system,which is based on You-Only-Look-Once(YOLO)model,to simultaneously localize and classify suspicious breast lesions from entire mammograms.The proposed system first preprocesses the raw images,then recognizes abnormal regions as breast lesions and determines their pathology classification as either mass or calcification.We evaluated the model on two publicly available datasets,with 2907 mammograms from the Curated Breast Imaging Subset of Digital Database for Screening Mammography(CBIS-DDSM)and 235 mammograms from INbreast database.We also used a privately collected dataset with 487 mammograms.Furthermore,we suggested a fusion models approach to report more precise detection and accurate classification.Our best results reached a detection accuracy rate of 95.7%,98.1%and 98%for mass lesions and 74.4%,71.8%and 73.2%for calcification lesions,respectively on CBIS-DDSM,INbreast and the private dataset.展开更多
Heart disease(HD)is a serious widespread life-threatening disease.The heart of patients with HD fails to pump sufcient amounts of blood to the entire body.Diagnosing the occurrence of HD early and efciently may preven...Heart disease(HD)is a serious widespread life-threatening disease.The heart of patients with HD fails to pump sufcient amounts of blood to the entire body.Diagnosing the occurrence of HD early and efciently may prevent the manifestation of the debilitating effects of this disease and aid in its effective treatment.Classical methods for diagnosing HD are sometimes unreliable and insufcient in analyzing the related symptoms.As an alternative,noninvasive medical procedures based on machine learning(ML)methods provide reliable HD diagnosis and efcient prediction of HD conditions.However,the existing models of automated ML-based HD diagnostic methods cannot satisfy clinical evaluation criteria because of their inability to recognize anomalies in extracted symptoms represented as classication features from patients with HD.In this study,we propose an automated heart disease diagnosis(AHDD)system that integrates a binary convolutional neural network(CNN)with a new multi-agent feature wrapper(MAFW)model.The MAFW model consists of four software agents that operate a genetic algorithm(GA),a support vector machine(SVM),and Naïve Bayes(NB).The agents instruct the GA to perform a global search on HD features and adjust the weights of SVM and BN during initial classication.A nal tuning to CNN is then performed to ensure that the best set of features are included in HD identication.The CNN consists of ve layers that categorize patients as healthy or with HD according to the analysis of optimized HD features.We evaluate the classication performance of the proposed AHDD system via 12 common ML techniques and conventional CNN models by using across-validation technique and by assessing six evaluation criteria.The AHDD system achieves the highest accuracy of 90.1%,whereas the other ML and conventional CNN models attain only 72.3%–83.8%accuracy on average.Therefore,the AHDD system proposed herein has the highest capability to identify patients with HD.This system can be used by medical practitioners to diagnose HD efciently。展开更多
Coronavirus(COVID-19)epidemic outbreak has devastating effects on daily lives and healthcare systems worldwide.This newly recognized virus is highly transmissible,and no clinically approved vaccine or antiviral medici...Coronavirus(COVID-19)epidemic outbreak has devastating effects on daily lives and healthcare systems worldwide.This newly recognized virus is highly transmissible,and no clinically approved vaccine or antiviral medicine is currently available.Early diagnosis of infected patients through effective screening is needed to control the rapid spread of this virus.Chest radiography imaging is an effective diagnosis tool for COVID-19 virus and followup.Here,a novel hybrid multimodal deep learning system for identifying COVID-19 virus in chest X-ray(CX-R)images is developed and termed as the COVID-DeepNet system to aid expert radiologists in rapid and accurate image interpretation.First,Contrast-Limited Adaptive Histogram Equalization(CLAHE)and Butterworth bandpass filter were applied to enhance the contrast and eliminate the noise in CX-R images,respectively.Results from two different deep learning approaches based on the incorporation of a deep belief network and a convolutional deep belief network trained from scratch using a large-scale dataset were then fused.Parallel architecture,which provides radiologists a high degree of confidence to distinguish healthy and COVID-19 infected people,was considered.The proposed COVID-DeepNet system can correctly and accurately diagnose patients with COVID-19 with a detection accuracy rate of 99.93%,sensitivity of 99.90%,specificity of 100%,precision of 100%,F1-score of 99.93%,MSE of 0.021%,and RMSE of 0.016%in a large-scale dataset.This system shows efficiency and accuracy and can be used in a real clinical center for the early diagnosis of COVID-19 virus and treatment follow-up with less than 3 s per image to make the final decision.展开更多
Left ventricular(LV)dysfunction is mainly assessed by global contractile indices such as ejection fraction and LV Volumes in cardiac MRI.While these indices give information about the presence or not of LV alteration,...Left ventricular(LV)dysfunction is mainly assessed by global contractile indices such as ejection fraction and LV Volumes in cardiac MRI.While these indices give information about the presence or not of LV alteration,they are not able to identify the location and the size of such alteration.The aim of this study is to compare the performance of three parametric imaging techniques used in cardiac MRI for the regional quantification of cardiac dysfunction.The proposed approaches were evaluated on 20 patients with myocardial infarction and 20 subjects with normal function.Three parametric images approaches:covariance analysis,parametric images based on Hilbert transform and those based on the monogenic signal were evaluated using cine-MRI frames acquired in three planes of views.The results show that parametric images generated from the monogenic signal were superior in term of sensitivity(89.69%),specificity(86.51%)and accuracy(89.06%)to those based on covariance analysis and Hilbert transform in the detection of contractile dysfunction related to myocardial infarction.Therefore,the parametric image based on the monogenic signal is likely to provide additional regional indices about LV dysfunction and it may be used in clinical practice as a tool for the analysis of the myocardial alterations.展开更多
Quantum Machine Learning(QML)techniques have been recently attracting massive interest.However reported applications usually employ synthetic or well-known datasets.One of these techniques based on using a hybrid appr...Quantum Machine Learning(QML)techniques have been recently attracting massive interest.However reported applications usually employ synthetic or well-known datasets.One of these techniques based on using a hybrid approach combining quantum and classic devices is the Variational Quantum Classifier(VQC),which development seems promising.Albeit being largely studied,VQC implementations for“real-world”datasets are still challenging on Noisy Intermediate Scale Quantum devices(NISQ).In this paper we propose a preprocessing pipeline based on Stokes parameters for data mapping.This pipeline enhances the prediction rates when applying VQC techniques,improving the feasibility of solving classification problems using NISQ devices.By including feature selection techniques and geometrical transformations,enhanced quantum state preparation is achieved.Also,a representation based on the Stokes parameters in the PoincaréSphere is possible for visualizing the data.Our results show that by using the proposed techniques we improve the classification score for the incidence of acute comorbid diseases in Type 2 Diabetes Mellitus patients.We used the implemented version of VQC available on IBM’s framework Qiskit,and obtained with two and three qubits an accuracy of 70%and 72%respectively.展开更多
As colon cancer is among the top causes of death, there is a growinginterest in developing improved techniques for the early detection of colonpolyps. Given the close relation between colon polyps and colon cancer,the...As colon cancer is among the top causes of death, there is a growinginterest in developing improved techniques for the early detection of colonpolyps. Given the close relation between colon polyps and colon cancer,their detection helps avoid cancer cases. The increment in the availability ofcolorectal screening tests and the number of colonoscopies have increasedthe burden on the medical personnel. In this article, the application of deeplearning techniques for the detection and segmentation of colon polyps incolonoscopies is presented. Four techniques were implemented and evaluated:Mask-RCNN, PANet, Cascade R-CNN and Hybrid Task Cascade (HTC).These were trained and tested using CVC-Colon database, ETIS-LARIBPolyp, and a proprietary dataset. Three experiments were conducted to assessthe techniques performance: (1) Training and testing using each databaseindependently, (2) Mergingd the databases and testing on each database independently using a merged test set, and (3) Training on each dataset and testingon the merged test set. In our experiments, PANet architecture has the bestperformance in Polyp detection, and HTC was the most accurate to segmentthem. This approach allows us to employ Deep Learning techniques to assisthealthcare professionals in the medical diagnosis for colon cancer. It is anticipated that this approach can be part of a framework for a semi-automatedpolyp detection in colonoscopies.展开更多
文摘The quick spread of the CoronavirusDisease(COVID-19)infection around the world considered a real danger for global health.The biological structure and symptoms of COVID-19 are similar to other viral chest maladies,which makes it challenging and a big issue to improve approaches for efficient identification of COVID-19 disease.In this study,an automatic prediction of COVID-19 identification is proposed to automatically discriminate between healthy and COVID-19 infected subjects in X-ray images using two successful moderns are traditional machine learning methods(e.g.,artificial neural network(ANN),support vector machine(SVM),linear kernel and radial basis function(RBF),k-nearest neighbor(k-NN),Decision Tree(DT),andCN2 rule inducer techniques)and deep learningmodels(e.g.,MobileNets V2,ResNet50,GoogleNet,DarkNet andXception).A largeX-ray dataset has been created and developed,namely the COVID-19 vs.Normal(400 healthy cases,and 400 COVID cases).To the best of our knowledge,it is currently the largest publicly accessible COVID-19 dataset with the largest number of X-ray images of confirmed COVID-19 infection cases.Based on the results obtained from the experiments,it can be concluded that all the models performed well,deep learning models had achieved the optimum accuracy of 98.8%in ResNet50 model.In comparison,in traditional machine learning techniques, the SVM demonstrated the best result for an accuracy of 95% and RBFaccuracy 94% for the prediction of coronavirus disease 2019.
文摘One of the most complex tasks for computer-aided diagnosis(Intelligent decision support system)is the segmentation of lesions.Thus,this study proposes a new fully automated method for the segmentation of ovarian and breast ultrasound images.The main contributions of this research is the development of a novel Viola–James model capable of segmenting the ultrasound images of breast and ovarian cancer cases.In addition,proposed an approach that can efficiently generate region-of-interest(ROI)and new features that can be used in characterizing lesion boundaries.This study uses two databases in training and testing the proposed segmentation approach.The breast cancer database contains 250 images,while that of the ovarian tumor has 100 images obtained from several hospitals in Iraq.Results of the experiments showed that the proposed approach demonstrates better performance compared with those of other segmentation methods used for segmenting breast and ovarian ultrasound images.The segmentation result of the proposed system compared with the other existing techniques in the breast cancer data set was 78.8%.By contrast,the segmentation result of the proposed system in the ovarian tumor data set was 79.2%.In the classification results,we achieved 95.43%accuracy,92.20%sensitivity,and 97.5%specificity when we used the breast cancer data set.For the ovarian tumor data set,we achieved 94.84%accuracy,96.96%sensitivity,and 90.32%specificity.
文摘With recent breakthroughs in artificial intelligence,the use of deep learning models achieved remarkable advances in computer vision,ecommerce,cybersecurity,and healthcare.Particularly,numerous applications provided efficient solutions to assist radiologists for medical imaging analysis.For instance,automatic lesion detection and classification in mammograms is still considered a crucial task that requires more accurate diagnosis and precise analysis of abnormal lesions.In this paper,we propose an end-to-end system,which is based on You-Only-Look-Once(YOLO)model,to simultaneously localize and classify suspicious breast lesions from entire mammograms.The proposed system first preprocesses the raw images,then recognizes abnormal regions as breast lesions and determines their pathology classification as either mass or calcification.We evaluated the model on two publicly available datasets,with 2907 mammograms from the Curated Breast Imaging Subset of Digital Database for Screening Mammography(CBIS-DDSM)and 235 mammograms from INbreast database.We also used a privately collected dataset with 487 mammograms.Furthermore,we suggested a fusion models approach to report more precise detection and accurate classification.Our best results reached a detection accuracy rate of 95.7%,98.1%and 98%for mass lesions and 74.4%,71.8%and 73.2%for calcification lesions,respectively on CBIS-DDSM,INbreast and the private dataset.
文摘Heart disease(HD)is a serious widespread life-threatening disease.The heart of patients with HD fails to pump sufcient amounts of blood to the entire body.Diagnosing the occurrence of HD early and efciently may prevent the manifestation of the debilitating effects of this disease and aid in its effective treatment.Classical methods for diagnosing HD are sometimes unreliable and insufcient in analyzing the related symptoms.As an alternative,noninvasive medical procedures based on machine learning(ML)methods provide reliable HD diagnosis and efcient prediction of HD conditions.However,the existing models of automated ML-based HD diagnostic methods cannot satisfy clinical evaluation criteria because of their inability to recognize anomalies in extracted symptoms represented as classication features from patients with HD.In this study,we propose an automated heart disease diagnosis(AHDD)system that integrates a binary convolutional neural network(CNN)with a new multi-agent feature wrapper(MAFW)model.The MAFW model consists of four software agents that operate a genetic algorithm(GA),a support vector machine(SVM),and Naïve Bayes(NB).The agents instruct the GA to perform a global search on HD features and adjust the weights of SVM and BN during initial classication.A nal tuning to CNN is then performed to ensure that the best set of features are included in HD identication.The CNN consists of ve layers that categorize patients as healthy or with HD according to the analysis of optimized HD features.We evaluate the classication performance of the proposed AHDD system via 12 common ML techniques and conventional CNN models by using across-validation technique and by assessing six evaluation criteria.The AHDD system achieves the highest accuracy of 90.1%,whereas the other ML and conventional CNN models attain only 72.3%–83.8%accuracy on average.Therefore,the AHDD system proposed herein has the highest capability to identify patients with HD.This system can be used by medical practitioners to diagnose HD efciently。
文摘Coronavirus(COVID-19)epidemic outbreak has devastating effects on daily lives and healthcare systems worldwide.This newly recognized virus is highly transmissible,and no clinically approved vaccine or antiviral medicine is currently available.Early diagnosis of infected patients through effective screening is needed to control the rapid spread of this virus.Chest radiography imaging is an effective diagnosis tool for COVID-19 virus and followup.Here,a novel hybrid multimodal deep learning system for identifying COVID-19 virus in chest X-ray(CX-R)images is developed and termed as the COVID-DeepNet system to aid expert radiologists in rapid and accurate image interpretation.First,Contrast-Limited Adaptive Histogram Equalization(CLAHE)and Butterworth bandpass filter were applied to enhance the contrast and eliminate the noise in CX-R images,respectively.Results from two different deep learning approaches based on the incorporation of a deep belief network and a convolutional deep belief network trained from scratch using a large-scale dataset were then fused.Parallel architecture,which provides radiologists a high degree of confidence to distinguish healthy and COVID-19 infected people,was considered.The proposed COVID-DeepNet system can correctly and accurately diagnose patients with COVID-19 with a detection accuracy rate of 99.93%,sensitivity of 99.90%,specificity of 100%,precision of 100%,F1-score of 99.93%,MSE of 0.021%,and RMSE of 0.016%in a large-scale dataset.This system shows efficiency and accuracy and can be used in a real clinical center for the early diagnosis of COVID-19 virus and treatment follow-up with less than 3 s per image to make the final decision.
基金This research received funding from Basque Country Government.
文摘Left ventricular(LV)dysfunction is mainly assessed by global contractile indices such as ejection fraction and LV Volumes in cardiac MRI.While these indices give information about the presence or not of LV alteration,they are not able to identify the location and the size of such alteration.The aim of this study is to compare the performance of three parametric imaging techniques used in cardiac MRI for the regional quantification of cardiac dysfunction.The proposed approaches were evaluated on 20 patients with myocardial infarction and 20 subjects with normal function.Three parametric images approaches:covariance analysis,parametric images based on Hilbert transform and those based on the monogenic signal were evaluated using cine-MRI frames acquired in three planes of views.The results show that parametric images generated from the monogenic signal were superior in term of sensitivity(89.69%),specificity(86.51%)and accuracy(89.06%)to those based on covariance analysis and Hilbert transform in the detection of contractile dysfunction related to myocardial infarction.Therefore,the parametric image based on the monogenic signal is likely to provide additional regional indices about LV dysfunction and it may be used in clinical practice as a tool for the analysis of the myocardial alterations.
基金funded by eVIDA Research group IT-905-16 from Basque Government.
文摘Quantum Machine Learning(QML)techniques have been recently attracting massive interest.However reported applications usually employ synthetic or well-known datasets.One of these techniques based on using a hybrid approach combining quantum and classic devices is the Variational Quantum Classifier(VQC),which development seems promising.Albeit being largely studied,VQC implementations for“real-world”datasets are still challenging on Noisy Intermediate Scale Quantum devices(NISQ).In this paper we propose a preprocessing pipeline based on Stokes parameters for data mapping.This pipeline enhances the prediction rates when applying VQC techniques,improving the feasibility of solving classification problems using NISQ devices.By including feature selection techniques and geometrical transformations,enhanced quantum state preparation is achieved.Also,a representation based on the Stokes parameters in the PoincaréSphere is possible for visualizing the data.Our results show that by using the proposed techniques we improve the classification score for the incidence of acute comorbid diseases in Type 2 Diabetes Mellitus patients.We used the implemented version of VQC available on IBM’s framework Qiskit,and obtained with two and three qubits an accuracy of 70%and 72%respectively.
基金supported by the Basque Government“Aids for health research projects”and the publication fees supported by the Basque Government Department of Education(eVIDA Certified Group IT905-16).
文摘As colon cancer is among the top causes of death, there is a growinginterest in developing improved techniques for the early detection of colonpolyps. Given the close relation between colon polyps and colon cancer,their detection helps avoid cancer cases. The increment in the availability ofcolorectal screening tests and the number of colonoscopies have increasedthe burden on the medical personnel. In this article, the application of deeplearning techniques for the detection and segmentation of colon polyps incolonoscopies is presented. Four techniques were implemented and evaluated:Mask-RCNN, PANet, Cascade R-CNN and Hybrid Task Cascade (HTC).These were trained and tested using CVC-Colon database, ETIS-LARIBPolyp, and a proprietary dataset. Three experiments were conducted to assessthe techniques performance: (1) Training and testing using each databaseindependently, (2) Mergingd the databases and testing on each database independently using a merged test set, and (3) Training on each dataset and testingon the merged test set. In our experiments, PANet architecture has the bestperformance in Polyp detection, and HTC was the most accurate to segmentthem. This approach allows us to employ Deep Learning techniques to assisthealthcare professionals in the medical diagnosis for colon cancer. It is anticipated that this approach can be part of a framework for a semi-automatedpolyp detection in colonoscopies.
